RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 TLN1Q9Y490 2541 aaKnown RBP1.09□□□□□ -2.23
SPTAN1-216ENST00000629047 M0QZ58 72 aa1.09□□□□□ -2.23
SPTAN1-216ENST00000629047 C10orf95Q9H7T3 257 aa1.09□□□□□ -2.23
SPTAN1-216ENST00000629047 NBASA2RRP1 2371 aa1.09□□□□□ -2.23
SPTAN1-216ENST00000629047 ABCA2Q9BZC7 2435 aa1.09□□□□□ -2.24
SPTAN1-216ENST00000629047 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.24
SPTAN1-216ENST00000629047 NCOR2Q9Y618 2525 aa1.09□□□□□ -2.24
SPTAN1-216ENST00000629047 SPTBN4Q9H254 2564 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 GVINP1Q7Z2Y8 2422 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 SPEGQ15772 3267 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 INE1O15225 51 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 RPS29P62273 56 aaKnown RBP1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 PRO2289Q9P1D8 64 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 UTP20O75691 2785 aaKnown RBP1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 BOD1L1Q8NFC6 3051 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 DMDP11532 3685 aa1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
SPTAN1-216ENST00000629047 DMXL1Q9Y485 3027 aa1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 COL12A1Q99715 3063 aa1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 ANKRD11Q6UB99 2663 aaPredicted RBP1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 IGF2RP11717 2491 aa1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 RIF1Q5UIP0 2472 aaKnown RBP1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 CELSR1Q9NYQ6 3014 aa1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 ATMQ13315 3056 aa1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 MYO9AB2RTY4 2548 aa1.07□□□□□ -2.24
SPTAN1-216ENST00000629047 HRNRQ86YZ3 2850 aaPredicted RBP1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 ASH1LQ9NR48 2969 aaKnown RBP1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 TENM2Q9NT68 2774 aa1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 Q6ZRN7 208 aaPredicted RBP1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 LOC400499M0QZD8 3231 aa1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 CELSR2Q9HCU4 2923 aa1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 CSMD1Q96PZ7 3565 aa1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 JMJD1CQ15652 2540 aa1.06□□□□□ -2.24
SPTAN1-216ENST00000629047 DCHS2Q6V1P9 2916 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 GCN1Q92616 2671 aaKnown RBP1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 FN1P02751 2386 aaKnown RBP1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 HIVEP2P31629 2446 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 R4GN34 69 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 SETXQ7Z333 2677 aaKnown RBP1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 SMG1Q96Q15 3661 aaKnown RBP1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 NBEAL2Q6ZNJ1 2754 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 TEX15Q9BXT5 2789 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 SONP18583 2426 aaKnown RBP1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 NAV2Q8IVL1 2488 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 MYO15AQ9UKN7 3530 aa1.05□□□□□ -2.24
SPTAN1-216ENST00000629047 ZFHX4Q86UP3 3567 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 USP9XQ93008 2570 aaPredicted RBP1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 OTOGLQ3ZCN5 2332 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 CRYBG3Q68DQ2 2970 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 SPENQ96T58 3664 aaKnown RBP1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 C9orf92A6NGG3 77 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 NF1P21359 2839 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 APCP25054 2843 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 F8P00451 2351 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 FLG2Q5D862 2391 aaPredicted RBP1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 HIVEP3Q5T1R4 2406 aa1.04□□□□□ -2.24
SPTAN1-216ENST00000629047 OTOGQ6ZRI0 2925 aa1.03□□□□□ -2.24
SPTAN1-216ENST00000629047 KRTAP12-1P59990 96 aa1.03□□□□□ -2.24
SPTAN1-216ENST00000629047 KRTAP13-2Q52LG2 175 aa1.03□□□□□ -2.24
SPTAN1-216ENST00000629047 LCE3DQ9BYE3 92 aa1.03□□□□□ -2.24
SPTAN1-216ENST00000629047 CEP295Q9C0D2 2601 aa1.03□□□□□ -2.24
SPTAN1-216ENST00000629047 MTORP42345 2549 aa1.03□□□□□ -2.25
SPTAN1-216ENST00000629047 ZFHX2Q9C0A1 2572 aaPredicted RBP1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 CHD8Q9HCK8 2581 aa1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 CENPEQ02224 2701 aa1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 UBR5O95071 2799 aaPredicted RBP1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 ZFYVE26Q68DK2 2539 aa1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 BAHCC1Q9P281 2608 aa1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 UNC79Q9P2D8 2635 aa1.02□□□□□ -2.25
SPTAN1-216ENST00000629047 EYSQ5T1H1 3165 aa1.01□□□□□ -2.25
SPTAN1-216ENST00000629047 EPG5Q9HCE0 2579 aa1.01□□□□□ -2.25
SPTAN1-216ENST00000629047 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
SPTAN1-216ENST00000629047 KRTAP13-4Q3LI77 160 aa1.01□□□□□ -2.25
SPTAN1-216ENST00000629047 DOPEY1Q5JWR5 2465 aa1.01□□□□□ -2.25
SPTAN1-216ENST00000629047 NIPBLQ6KC79 2804 aaeCLIP1□□□□□ -2.25
SPTAN1-216ENST00000629047 MXRA5Q9NR99 2828 aa1□□□□□ -2.25
SPTAN1-216ENST00000629047 ASPMQ8IZT6 3477 aa1□□□□□ -2.25
SPTAN1-216ENST00000629047 USP9YO00507 2555 aaPredicted RBP1□□□□□ -2.25
SPTAN1-216ENST00000629047 Q5VSD8 79 aa1□□□□□ -2.25
SPTAN1-216ENST00000629047 PTPN13Q12923 2485 aa1□□□□□ -2.25
SPTAN1-216ENST00000629047 CCDC168Q8NDH2 2452 aa1□□□□□ -2.25
SPTAN1-216ENST00000629047 HELZ2Q9BYK8 2649 aaKnown RBP1□□□□□ -2.25
SPTAN1-216ENST00000629047 PIEZO1Q92508 2521 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 AKAP9Q99996 3911 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 J3QKU1 62 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 TNP1P09430 55 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 SMR3AQ99954 134 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 LRRK2Q5S007 2527 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 MUC6Q6W4X9 2439 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 NBPF19A0A087WUL8 3843 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 HECTD1Q9ULT8 2610 aa0.99□□□□□ -2.25
SPTAN1-216ENST00000629047 BDP1A6H8Y1 2624 aa0.98□□□□□ -2.25
SPTAN1-216ENST00000629047 KRTAP1-4P0C5Y4 121 aa0.98□□□□□ -2.25
SPTAN1-216ENST00000629047 ACACBO00763 2458 aa0.98□□□□□ -2.25
SPTAN1-216ENST00000629047 TGP01266 2768 aa0.98□□□□□ -2.25
SPTAN1-216ENST00000629047 SRRM2Q9UQ35 2752 aaKnown RBP0.98□□□□□ -2.25
SPTAN1-216ENST00000629047 CFAP46Q8IYW2 2715 aa0.98□□□□□ -2.25
SPTAN1-216ENST00000629047 ABCA12Q86UK0 2595 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms