RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 TRAV7A0A075B6U4 112 aa11.07□□□□□ -0.64
CNOT9-209ENST00000627282 HRCT1Q6UXD1 115 aa11.07□□□□□ -0.64
CNOT9-209ENST00000627282 SS18L2Q9UHA2 77 aa11.06□□□□□ -0.64
CNOT9-209ENST00000627282 J3KT08 172 aa11.04□□□□□ -0.64
CNOT9-209ENST00000627282 LINC00304Q8N9R0 145 aa11.03□□□□□ -0.64
CNOT9-209ENST00000627282 CD164Q04900 197 aa11.02□□□□□ -0.64
CNOT9-209ENST00000627282 Q96NJ1 140 aa11.02□□□□□ -0.65
CNOT9-209ENST00000627282 A8MWP4 228 aa11.01□□□□□ -0.65
CNOT9-209ENST00000627282 PRR15Q8IV56 129 aa10.99□□□□□ -0.65
CNOT9-209ENST00000627282 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
CNOT9-209ENST00000627282 UBR4Q5T4S7 5183 aa10.96□□□□□ -0.65
CNOT9-209ENST00000627282 OCR1Q9BZK8 76 aa10.96□□□□□ -0.65
CNOT9-209ENST00000627282 LRP2P98164 4655 aa10.95□□□□□ -0.66
CNOT9-209ENST00000627282 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
CNOT9-209ENST00000627282 NDUFB1O75438 58 aa10.93□□□□□ -0.66
CNOT9-209ENST00000627282 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
CNOT9-209ENST00000627282 SPINK1P00995 79 aa10.91□□□□□ -0.66
CNOT9-209ENST00000627282 ASB16-AS1Q495Z4 193 aa10.91□□□□□ -0.66
CNOT9-209ENST00000627282 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
CNOT9-209ENST00000627282 WFDC13Q8IUB5 93 aa10.89□□□□□ -0.67
CNOT9-209ENST00000627282 CASC2Q6XLA1 102 aa10.87□□□□□ -0.67
CNOT9-209ENST00000627282 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
CNOT9-209ENST00000627282 MMP24-AS1A0A0U1RRL7 71 aa10.86□□□□□ -0.67
CNOT9-209ENST00000627282 Q5XG85 94 aa10.86□□□□□ -0.67
CNOT9-209ENST00000627282 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
CNOT9-209ENST00000627282 RPS29P62273 56 aaKnown RBP10.84□□□□□ -0.67
CNOT9-209ENST00000627282 KLKP1Q107X0 134 aa10.84□□□□□ -0.67
CNOT9-209ENST00000627282 RETNLBQ9BQ08 111 aa10.82□□□□□ -0.68
CNOT9-209ENST00000627282 C8orf17Q9NRJ1 99 aa10.81□□□□□ -0.68
CNOT9-209ENST00000627282 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
CNOT9-209ENST00000627282 IGHV6-1A0A0B4J1U7 121 aa10.79□□□□□ -0.68
CNOT9-209ENST00000627282 hDV103S1A0JD37 113 aa10.79□□□□□ -0.68
CNOT9-209ENST00000627282 PRR4Q16378 134 aa10.78□□□□□ -0.68
CNOT9-209ENST00000627282 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
CNOT9-209ENST00000627282 SNURFQ9Y675 71 aa10.78□□□□□ -0.68
CNOT9-209ENST00000627282 A0A0U1RQV1 116 aa10.77□□□□□ -0.68
CNOT9-209ENST00000627282 C5orf47Q569G3 176 aa10.76□□□□□ -0.69
CNOT9-209ENST00000627282 TMEM258P61165 79 aa10.75□□□□□ -0.69
CNOT9-209ENST00000627282 C1orf195Q5TG92 126 aa10.75□□□□□ -0.69
CNOT9-209ENST00000627282 LPAP08519 4548 aa10.74□□□□□ -0.69
CNOT9-209ENST00000627282 H7BZZ5 65 aa10.73□□□□□ -0.69
CNOT9-209ENST00000627282 NDUFC1O43677 76 aa10.73□□□□□ -0.69
CNOT9-209ENST00000627282 NOTCH2NLQ7Z3S9 236 aa10.7□□□□□ -0.7
CNOT9-209ENST00000627282 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
CNOT9-209ENST00000627282 MRPL34Q9BQ48 92 aaKnown RBP10.69□□□□□ -0.7
CNOT9-209ENST00000627282 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
CNOT9-209ENST00000627282 ZCCHC13Q8WW36 166 aaKnown RBP10.67□□□□□ -0.7
CNOT9-209ENST00000627282 RNF213Q63HN8 5207 aa10.67□□□□□ -0.7
CNOT9-209ENST00000627282 IGLV7-46A0A075B6I9 117 aa10.66□□□□□ -0.7
CNOT9-209ENST00000627282 TP53AIP1Q9HCN2 124 aa10.66□□□□□ -0.7
CNOT9-209ENST00000627282 MP68P56378 58 aa10.65□□□□□ -0.7
CNOT9-209ENST00000627282 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
CNOT9-209ENST00000627282 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
CNOT9-209ENST00000627282 H0Y9P7 68 aa10.62□□□□□ -0.71
CNOT9-209ENST00000627282 H3BPC8 53 aa10.62□□□□□ -0.71
CNOT9-209ENST00000627282 LINC00313P59037 77 aa10.61□□□□□ -0.71
CNOT9-209ENST00000627282 FAM236DA0A1B0GTK5 79 aa10.6□□□□□ -0.71
CNOT9-209ENST00000627282 FAM236CP0DP71 79 aa10.6□□□□□ -0.71
CNOT9-209ENST00000627282 NDUFS5O43920 106 aa10.59□□□□□ -0.71
CNOT9-209ENST00000627282 TRAV22A0A0B4J277 110 aa10.58□□□□□ -0.72
CNOT9-209ENST00000627282 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
CNOT9-209ENST00000627282 LINC00208Q96KT6 92 aa10.58□□□□□ -0.72
CNOT9-209ENST00000627282 KRTAP13-3Q3SY46 172 aa10.55□□□□□ -0.72
CNOT9-209ENST00000627282 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-209ENST00000627282 RPS28P62857 69 aaKnown RBP10.52□□□□□ -0.73
CNOT9-209ENST00000627282 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
CNOT9-209ENST00000627282 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
CNOT9-209ENST00000627282 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-209ENST00000627282 C9orf92A6NGG3 77 aa10.44□□□□□ -0.74
CNOT9-209ENST00000627282 Q5W150 140 aa10.44□□□□□ -0.74
CNOT9-209ENST00000627282 SERP1Q9Y6X1 66 aa10.44□□□□□ -0.74
CNOT9-209ENST00000627282 MUC2Q02817 5179 aa10.41□□□□□ -0.74
CNOT9-209ENST00000627282 XP32Q5T750 250 aa10.39□□□□□ -0.75
CNOT9-209ENST00000627282 SPANXA2-OT1Q8N9U9 137 aa10.38□□□□□ -0.75
CNOT9-209ENST00000627282 LOC101927531A0A1B0GV80 90 aa10.37□□□□□ -0.75
CNOT9-209ENST00000627282 CYP4F30PQ9H0H9 118 aa10.36□□□□□ -0.75
CNOT9-209ENST00000627282 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
CNOT9-209ENST00000627282 PCOTHQ58A44 107 aa10.31□□□□□ -0.76
CNOT9-209ENST00000627282 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
CNOT9-209ENST00000627282 C20orf166-AS1Q96NR2 134 aa10.24□□□□□ -0.77
CNOT9-209ENST00000627282 A8MUU9 505 aa10.23□□□□□ -0.77
CNOT9-209ENST00000627282 RPL37P61927 97 aaKnown RBP10.21□□□□□ -0.78
CNOT9-209ENST00000627282 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
CNOT9-209ENST00000627282 SMIM26A0A096LP01 95 aa10.19□□□□□ -0.78
CNOT9-209ENST00000627282 Q75L30 129 aa10.17□□□□□ -0.78
CNOT9-209ENST00000627282 HRES1P13985 223 aa10.13□□□□□ -0.79
CNOT9-209ENST00000627282 IGKV2D-30A0A075B6S6 120 aa10.12□□□□□ -0.79
CNOT9-209ENST00000627282 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
CNOT9-209ENST00000627282 FAT4Q6V0I7 4981 aa10.09□□□□□ -0.79
CNOT9-209ENST00000627282 C7orf65Q6ZTY9 151 aa10.07□□□□□ -0.8
CNOT9-209ENST00000627282 COA5Q86WW8 74 aa10.07□□□□□ -0.8
CNOT9-209ENST00000627282 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
CNOT9-209ENST00000627282 ATP11AUNQ6ZP68 121 aa10.05□□□□□ -0.8
CNOT9-209ENST00000627282 DMAC1Q96GE9 116 aa10.02□□□□□ -0.81
CNOT9-209ENST00000627282 ACYP2P14621 99 aa10□□□□□ -0.81
CNOT9-209ENST00000627282 C4orf26Q17RF5 130 aa9.96□□□□□ -0.81
CNOT9-209ENST00000627282 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
CNOT9-209ENST00000627282 Q1T7F1 81 aa9.94□□□□□ -0.82
CNOT9-209ENST00000627282 SPINK7P58062 85 aa9.92□□□□□ -0.82
CNOT9-209ENST00000627282 V9GYY9 64 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms