RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 C9orf153Q5TBE3 101 aa5.8□□□□□ -1.48
LINC01943-201ENST00000625410 IGKV4-1P06312 121 aa5.79□□□□□ -1.48
LINC01943-201ENST00000625410 DSCR10P59022 87 aa5.79□□□□□ -1.48
LINC01943-201ENST00000625410 NREPQ16612 68 aa5.79□□□□□ -1.48
LINC01943-201ENST00000625410 FAM229BQ4G0N7 80 aa5.78□□□□□ -1.48
LINC01943-201ENST00000625410 Q8N9L7 120 aa5.78□□□□□ -1.48
LINC01943-201ENST00000625410 Q96NJ1 140 aa5.78□□□□□ -1.48
LINC01943-201ENST00000625410 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
LINC01943-201ENST00000625410 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
LINC01943-201ENST00000625410 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
LINC01943-201ENST00000625410 LINC00472Q9H8W2 130 aa5.77□□□□□ -1.49
LINC01943-201ENST00000625410 BPY2O14599 106 aa5.76□□□□□ -1.49
LINC01943-201ENST00000625410 SPINK6Q6UWN8 80 aa5.75□□□□□ -1.49
LINC01943-201ENST00000625410 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
LINC01943-201ENST00000625410 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
LINC01943-201ENST00000625410 DEFB116Q30KQ4 102 aa5.74□□□□□ -1.49
LINC01943-201ENST00000625410 HRCT1Q6UXD1 115 aa5.74□□□□□ -1.49
LINC01943-201ENST00000625410 SSBP3-AS1Q7Z2R9 100 aa5.74□□□□□ -1.49
LINC01943-201ENST00000625410 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
LINC01943-201ENST00000625410 K7EQZ3 153 aa5.72□□□□□ -1.49
LINC01943-201ENST00000625410 Q5VSD8 79 aa5.72□□□□□ -1.49
LINC01943-201ENST00000625410 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
LINC01943-201ENST00000625410 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
LINC01943-201ENST00000625410 NDUFS5O43920 106 aa5.69□□□□□ -1.5
LINC01943-201ENST00000625410 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
LINC01943-201ENST00000625410 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
LINC01943-201ENST00000625410 TNXBP22105 4242 aa5.68□□□□□ -1.5
LINC01943-201ENST00000625410 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
LINC01943-201ENST00000625410 Q5XG85 94 aa5.67□□□□□ -1.5
LINC01943-201ENST00000625410 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
LINC01943-201ENST00000625410 A8MWP4 228 aa5.66□□□□□ -1.5
LINC01943-201ENST00000625410 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
LINC01943-201ENST00000625410 ATOX1O00244 68 aa5.66□□□□□ -1.5
LINC01943-201ENST00000625410 PRR15Q8IV56 129 aa5.66□□□□□ -1.5
LINC01943-201ENST00000625410 CCDC179H3BU77 68 aa5.65□□□□□ -1.5
LINC01943-201ENST00000625410 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
LINC01943-201ENST00000625410 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
LINC01943-201ENST00000625410 RBM12B-AS1Q9P1G2 102 aa5.64□□□□□ -1.51
LINC01943-201ENST00000625410 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
LINC01943-201ENST00000625410 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
LINC01943-201ENST00000625410 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
LINC01943-201ENST00000625410 COX7CP15954 63 aa5.61□□□□□ -1.51
LINC01943-201ENST00000625410 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
LINC01943-201ENST00000625410 SERP2Q8N6R1 65 aa5.61□□□□□ -1.51
LINC01943-201ENST00000625410 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
LINC01943-201ENST00000625410 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
LINC01943-201ENST00000625410 PSPHP1O15172 72 aa5.6□□□□□ -1.51
LINC01943-201ENST00000625410 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
LINC01943-201ENST00000625410 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
LINC01943-201ENST00000625410 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
LINC01943-201ENST00000625410 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
LINC01943-201ENST00000625410 WFDC13Q8IUB5 93 aa5.59□□□□□ -1.51
LINC01943-201ENST00000625410 HMCN2Q8NDA2 5059 aa5.59□□□□□ -1.51
LINC01943-201ENST00000625410 SPINK1P00995 79 aa5.58□□□□□ -1.52
LINC01943-201ENST00000625410 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
LINC01943-201ENST00000625410 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
LINC01943-201ENST00000625410 UQCRQO14949 82 aa5.57□□□□□ -1.52
LINC01943-201ENST00000625410 MP68P56378 58 aa5.56□□□□□ -1.52
LINC01943-201ENST00000625410 TMEM258P61165 79 aa5.56□□□□□ -1.52
LINC01943-201ENST00000625410 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
LINC01943-201ENST00000625410 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
LINC01943-201ENST00000625410 MT1HL1P0DM35 61 aa5.55□□□□□ -1.52
LINC01943-201ENST00000625410 CASC2Q6XLA1 102 aa5.55□□□□□ -1.52
LINC01943-201ENST00000625410 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
LINC01943-201ENST00000625410 KRTAP16-1A8MUX0 517 aa5.54□□□□□ -1.52
LINC01943-201ENST00000625410 NDUFB1O75438 58 aa5.54□□□□□ -1.52
LINC01943-201ENST00000625410 SPAG11AQ6PDA7 123 aa5.54□□□□□ -1.52
LINC01943-201ENST00000625410 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
LINC01943-201ENST00000625410 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
LINC01943-201ENST00000625410 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
LINC01943-201ENST00000625410 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
LINC01943-201ENST00000625410 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
LINC01943-201ENST00000625410 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
LINC01943-201ENST00000625410 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
LINC01943-201ENST00000625410 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
LINC01943-201ENST00000625410 MRPL34Q9BQ48 92 aaKnown RBP5.49□□□□□ -1.53
LINC01943-201ENST00000625410 KLKP1Q107X0 134 aa5.48□□□□□ -1.53
LINC01943-201ENST00000625410 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
LINC01943-201ENST00000625410 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
LINC01943-201ENST00000625410 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
LINC01943-201ENST00000625410 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
LINC01943-201ENST00000625410 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
LINC01943-201ENST00000625410 A8MUN3 132 aa5.45□□□□□ -1.54
LINC01943-201ENST00000625410 LINC00313P59037 77 aa5.45□□□□□ -1.54
LINC01943-201ENST00000625410 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
LINC01943-201ENST00000625410 H7BZZ5 65 aa5.44□□□□□ -1.54
LINC01943-201ENST00000625410 Q5W150 140 aa5.44□□□□□ -1.54
LINC01943-201ENST00000625410 LCA10Q71F78 164 aa5.44□□□□□ -1.54
LINC01943-201ENST00000625410 H0Y9P7 68 aa5.42□□□□□ -1.54
LINC01943-201ENST00000625410 LRP2P98164 4655 aa5.41□□□□□ -1.54
LINC01943-201ENST00000625410 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
LINC01943-201ENST00000625410 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
LINC01943-201ENST00000625410 RNF213Q63HN8 5207 aa5.4□□□□□ -1.55
LINC01943-201ENST00000625410 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
LINC01943-201ENST00000625410 LINC00208Q96KT6 92 aa5.38□□□□□ -1.55
LINC01943-201ENST00000625410 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
LINC01943-201ENST00000625410 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
LINC01943-201ENST00000625410 A8MUU9 505 aa5.36□□□□□ -1.55
LINC01943-201ENST00000625410 H3BPC8 53 aa5.36□□□□□ -1.55
LINC01943-201ENST00000625410 C20orf166-AS1Q96NR2 134 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms