RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 ACACBO00763 2458 aa1.86□□□□□ -2.11
ATRX-212ENST00000623706 WDR87Q6ZQQ6 2873 aa1.85□□□□□ -2.11
ATRX-212ENST00000623706 COL27A1Q8IZC6 1860 aaPredicted RBP1.85□□□□□ -2.11
ATRX-212ENST00000623706 C5orf42Q9H799 3197 aa1.85□□□□□ -2.11
ATRX-212ENST00000623706 CSMD3Q7Z407 3707 aa1.85□□□□□ -2.11
ATRX-212ENST00000623706 UNC79Q9P2D8 2635 aa1.85□□□□□ -2.11
ATRX-212ENST00000623706 FBN3Q75N90 2809 aa1.85□□□□□ -2.11
ATRX-212ENST00000623706 FBN1P35555 2871 aaKnown RBP1.85□□□□□ -2.11
ATRX-212ENST00000623706 DYNC2H1Q8NCM8 4307 aaKnown RBP1.85□□□□□ -2.11
ATRX-212ENST00000623706 XP32Q5T750 250 aa1.85□□□□□ -2.11
ATRX-212ENST00000623706 DNAH1Q9P2D7 4330 aa1.84□□□□□ -2.11
ATRX-212ENST00000623706 TLN2Q9Y4G6 2542 aa1.84□□□□□ -2.12
ATRX-212ENST00000623706 MTORP42345 2549 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 DNAH7Q8WXX0 4024 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 KRTAP10-6P60371 365 aaPredicted RBP1.83□□□□□ -2.12
ATRX-212ENST00000623706 KRTAP15-1Q3LI76 137 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 ADGRG4Q8IZF6 3080 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 FBN2P35556 2912 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 H0YAA0 97 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 LCE2CQ5TA81 110 aa1.83□□□□□ -2.12
ATRX-212ENST00000623706 PRRC2CQ9Y520 2896 aaKnown RBP1.82□□□□□ -2.12
ATRX-212ENST00000623706 PRKDCP78527 4128 aaKnown RBP1.82□□□□□ -2.12
ATRX-212ENST00000623706 LRRK2Q5S007 2527 aa1.81□□□□□ -2.12
ATRX-212ENST00000623706 NOTCH2Q04721 2471 aa1.81□□□□□ -2.12
ATRX-212ENST00000623706 KRTAP10-11P60412 298 aa1.8□□□□□ -2.12
ATRX-212ENST00000623706 BDP1A6H8Y1 2624 aa1.8□□□□□ -2.12
ATRX-212ENST00000623706 WDFY4Q6ZS81 3184 aa1.8□□□□□ -2.12
ATRX-212ENST00000623706 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
ATRX-212ENST00000623706 VPS13AQ96RL7 3174 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 CELSR3Q9NYQ7 3312 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 FREM2Q5SZK8 3169 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 IGF2RP11717 2491 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 ANKHD1Q8IWZ3 2542 aaKnown RBP1.79□□□□□ -2.12
ATRX-212ENST00000623706 DNAH6Q9C0G6 4158 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 DMXL2Q8TDJ6 3036 aa1.79□□□□□ -2.12
ATRX-212ENST00000623706 HELZ2Q9BYK8 2649 aaKnown RBP1.79□□□□□ -2.12
ATRX-212ENST00000623706 PKHD1L1Q86WI1 4243 aa1.78□□□□□ -2.12
ATRX-212ENST00000623706 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
ATRX-212ENST00000623706 KRTAP10-10P60014 251 aa1.78□□□□□ -2.12
ATRX-212ENST00000623706 TPRXLQ17RH7 258 aa1.78□□□□□ -2.12
ATRX-212ENST00000623706 PCSK5Q92824 1860 aa1.78□□□□□ -2.12
ATRX-212ENST00000623706 CACNA1AO00555 2505 aa1.78□□□□□ -2.12
ATRX-212ENST00000623706 PKHD1P08F94 4074 aa1.78□□□□□ -2.13
ATRX-212ENST00000623706 LORP23490 312 aaPredicted RBP1.78□□□□□ -2.13
ATRX-212ENST00000623706 BOD1L1Q8NFC6 3051 aa1.78□□□□□ -2.13
ATRX-212ENST00000623706 USH2AO75445 5202 aa1.77□□□□□ -2.13
ATRX-212ENST00000623706 BAHCC1Q9P281 2608 aa1.77□□□□□ -2.13
ATRX-212ENST00000623706 CELSR1Q9NYQ6 3014 aa1.77□□□□□ -2.13
ATRX-212ENST00000623706 MUC22E2RYF6 1773 aaPredicted RBP1.76□□□□□ -2.13
ATRX-212ENST00000623706 HECTD4Q9Y4D8 3996 aa1.76□□□□□ -2.13
ATRX-212ENST00000623706 TRRAPQ9Y4A5 3859 aa1.76□□□□□ -2.13
ATRX-212ENST00000623706 JMJD1CQ15652 2540 aa1.76□□□□□ -2.13
ATRX-212ENST00000623706 FAT2Q9NYQ8 4349 aa1.76□□□□□ -2.13
ATRX-212ENST00000623706 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
ATRX-212ENST00000623706 KRTAP19-4Q3LI73 84 aa1.75□□□□□ -2.13
ATRX-212ENST00000623706 POLQO75417 2590 aa1.75□□□□□ -2.13
ATRX-212ENST00000623706 MYO18BQ8IUG5 2567 aa1.74□□□□□ -2.13
ATRX-212ENST00000623706 DMXL1Q9Y485 3027 aa1.74□□□□□ -2.13
ATRX-212ENST00000623706 KRTAP10-5P60370 271 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 SVEP1Q4LDE5 3571 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 HERC1Q15751 4861 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 LRBAP50851 2863 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 TLN1Q9Y490 2541 aaKnown RBP1.73□□□□□ -2.13
ATRX-212ENST00000623706 CHD8Q9HCK8 2581 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 KALRNO60229 2985 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 RPS29P62273 56 aaKnown RBP1.73□□□□□ -2.13
ATRX-212ENST00000623706 APCP25054 2843 aa1.73□□□□□ -2.13
ATRX-212ENST00000623706 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
ATRX-212ENST00000623706 LOC400499M0QZD8 3231 aa1.72□□□□□ -2.13
ATRX-212ENST00000623706 DNAH17Q9UFH2 4485 aa1.72□□□□□ -2.13
ATRX-212ENST00000623706 NF1P21359 2839 aa1.72□□□□□ -2.13
ATRX-212ENST00000623706 KRTAP10-1P60331 282 aa1.72□□□□□ -2.13
ATRX-212ENST00000623706 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
ATRX-212ENST00000623706 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
ATRX-212ENST00000623706 SPTBN4Q9H254 2564 aa1.7□□□□□ -2.14
ATRX-212ENST00000623706 ATMQ13315 3056 aa1.69□□□□□ -2.14
ATRX-212ENST00000623706 LCE6AA0A183 80 aa1.69□□□□□ -2.14
ATRX-212ENST00000623706 KRTAP10-2P60368 255 aa1.69□□□□□ -2.14
ATRX-212ENST00000623706 KRTAP10-4P60372 401 aaPredicted RBP1.69□□□□□ -2.14
ATRX-212ENST00000623706 DCHS2Q6V1P9 2916 aa1.68□□□□□ -2.14
ATRX-212ENST00000623706 ALMS1Q8TCU4 4167 aa1.68□□□□□ -2.14
ATRX-212ENST00000623706 COL12A1Q99715 3063 aa1.68□□□□□ -2.14
ATRX-212ENST00000623706 FASNP49327 2511 aaKnown RBP1.67□□□□□ -2.14
ATRX-212ENST00000623706 CELSR2Q9HCU4 2923 aa1.67□□□□□ -2.14
ATRX-212ENST00000623706 UBR5O95071 2799 aaPredicted RBP1.67□□□□□ -2.14
ATRX-212ENST00000623706 PKD1P98161 4303 aa1.67□□□□□ -2.14
ATRX-212ENST00000623706 USP9XQ93008 2570 aaPredicted RBP1.67□□□□□ -2.14
ATRX-212ENST00000623706 DNAH9Q9NYC9 4486 aa1.67□□□□□ -2.14
ATRX-212ENST00000623706 STAB2Q8WWQ8 2551 aa1.67□□□□□ -2.14
ATRX-212ENST00000623706 LOC100996750A0A140TA64 210 aa1.66□□□□□ -2.14
ATRX-212ENST00000623706 KRTAP10-3P60369 221 aa1.66□□□□□ -2.14
ATRX-212ENST00000623706 KRTAP4-6Q9BYQ5 205 aa1.66□□□□□ -2.14
ATRX-212ENST00000623706 AKAP13Q12802 2813 aa1.66□□□□□ -2.14
ATRX-212ENST00000623706 MGAQ8IWI9 3026 aa1.66□□□□□ -2.14
ATRX-212ENST00000623706 HECTD1Q9ULT8 2610 aa1.65□□□□□ -2.14
ATRX-212ENST00000623706 VPS13DQ5THJ4 4388 aa1.65□□□□□ -2.15
ATRX-212ENST00000623706 DNAH2Q9P225 4427 aa1.64□□□□□ -2.15
ATRX-212ENST00000623706 KRTAP1-5Q9BYS1 174 aa1.64□□□□□ -2.15
ATRX-212ENST00000623706 VPS13BQ7Z7G8 4022 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms