RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 SPINK6Q6UWN8 80 aa7.06□□□□□ -1.28
TP53-227ENST00000622645 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
TP53-227ENST00000622645 NDUFS5O43920 106 aa7.04□□□□□ -1.28
TP53-227ENST00000622645 Q1T7F1 81 aa7.04□□□□□ -1.28
TP53-227ENST00000622645 KRTAP10-1P60331 282 aa7.04□□□□□ -1.28
TP53-227ENST00000622645 LRP1BQ9NZR2 4599 aa7.02□□□□□ -1.29
TP53-227ENST00000622645 PSPHP1O15172 72 aa7.02□□□□□ -1.29
TP53-227ENST00000622645 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.29
TP53-227ENST00000622645 MRPL34Q9BQ48 92 aaKnown RBP7.01□□□□□ -1.29
TP53-227ENST00000622645 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
TP53-227ENST00000622645 Q6ZSA8 131 aa7□□□□□ -1.29
TP53-227ENST00000622645 PCOTHQ58A44 107 aa6.99□□□□□ -1.29
TP53-227ENST00000622645 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
TP53-227ENST00000622645 PKD1P98161 4303 aa6.98□□□□□ -1.29
TP53-227ENST00000622645 FAT2Q9NYQ8 4349 aa6.97□□□□□ -1.29
TP53-227ENST00000622645 CD164Q04900 197 aa6.97□□□□□ -1.29
TP53-227ENST00000622645 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
TP53-227ENST00000622645 A8MUN3 132 aa6.95□□□□□ -1.3
TP53-227ENST00000622645 IGLV7-46A0A075B6I9 117 aa6.94□□□□□ -1.3
TP53-227ENST00000622645 Q5W150 140 aa6.93□□□□□ -1.3
TP53-227ENST00000622645 V9GYY9 64 aa6.91□□□□□ -1.3
TP53-227ENST00000622645 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
TP53-227ENST00000622645 COA5Q86WW8 74 aa6.91□□□□□ -1.3
TP53-227ENST00000622645 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
TP53-227ENST00000622645 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
TP53-227ENST00000622645 Q5VV11 94 aa6.89□□□□□ -1.31
TP53-227ENST00000622645 VPS13BQ7Z7G8 4022 aa6.89□□□□□ -1.31
TP53-227ENST00000622645 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
TP53-227ENST00000622645 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
TP53-227ENST00000622645 LINC00313P59037 77 aa6.87□□□□□ -1.31
TP53-227ENST00000622645 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
TP53-227ENST00000622645 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
TP53-227ENST00000622645 A8MU10 97 aa6.85□□□□□ -1.31
TP53-227ENST00000622645 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
TP53-227ENST00000622645 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
TP53-227ENST00000622645 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
TP53-227ENST00000622645 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
TP53-227ENST00000622645 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
TP53-227ENST00000622645 HRES1P13985 223 aa6.81□□□□□ -1.32
TP53-227ENST00000622645 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
TP53-227ENST00000622645 SACSQ9NZJ4 4579 aa6.8□□□□□ -1.32
TP53-227ENST00000622645 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
TP53-227ENST00000622645 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
TP53-227ENST00000622645 KRTAP16-1A8MUX0 517 aa6.78□□□□□ -1.32
TP53-227ENST00000622645 LCE2DQ5TA82 110 aaPredicted RBP6.78□□□□□ -1.32
TP53-227ENST00000622645 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
TP53-227ENST00000622645 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
TP53-227ENST00000622645 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
TP53-227ENST00000622645 Q75L30 129 aa6.76□□□□□ -1.33
TP53-227ENST00000622645 SPINK1P00995 79 aa6.75□□□□□ -1.33
TP53-227ENST00000622645 A6NED7 52 aa6.74□□□□□ -1.33
TP53-227ENST00000622645 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
TP53-227ENST00000622645 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
TP53-227ENST00000622645 LCA10Q71F78 164 aa6.73□□□□□ -1.33
TP53-227ENST00000622645 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
TP53-227ENST00000622645 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
TP53-227ENST00000622645 FAT1Q14517 4588 aa6.7□□□□□ -1.34
TP53-227ENST00000622645 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
TP53-227ENST00000622645 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
TP53-227ENST00000622645 ACYP2P14621 99 aa6.69□□□□□ -1.34
TP53-227ENST00000622645 IGKV2D-30A0A075B6S6 120 aa6.68□□□□□ -1.34
TP53-227ENST00000622645 A0A1B0GVY2 172 aa6.68□□□□□ -1.34
TP53-227ENST00000622645 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
TP53-227ENST00000622645 SPINK7P58062 85 aa6.65□□□□□ -1.34
TP53-227ENST00000622645 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
TP53-227ENST00000622645 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
TP53-227ENST00000622645 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
TP53-227ENST00000622645 RPS29P62273 56 aaKnown RBP6.63□□□□□ -1.35
TP53-227ENST00000622645 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
TP53-227ENST00000622645 KMT2CQ8NEZ4 4911 aaKnown RBP6.61□□□□□ -1.35
TP53-227ENST00000622645 RYR2Q92736 4967 aa6.6□□□□□ -1.35
TP53-227ENST00000622645 C9orf92A6NGG3 77 aa6.59□□□□□ -1.35
TP53-227ENST00000622645 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
TP53-227ENST00000622645 A6NN06 94 aa6.56□□□□□ -1.36
TP53-227ENST00000622645 SEC61GP60059 68 aa6.54□□□□□ -1.36
TP53-227ENST00000622645 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
TP53-227ENST00000622645 PKHD1L1Q86WI1 4243 aa6.53□□□□□ -1.36
TP53-227ENST00000622645 Q8N1X5 172 aa6.53□□□□□ -1.36
TP53-227ENST00000622645 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
TP53-227ENST00000622645 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
TP53-227ENST00000622645 A0A1B0GU69 56 aa6.5□□□□□ -1.37
TP53-227ENST00000622645 C20orf166-AS1Q96NR2 134 aa6.5□□□□□ -1.37
TP53-227ENST00000622645 A8MUU9 505 aa6.49□□□□□ -1.37
TP53-227ENST00000622645 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
TP53-227ENST00000622645 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.38
TP53-227ENST00000622645 Q5VSD8 79 aa6.4□□□□□ -1.39
TP53-227ENST00000622645 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.39
TP53-227ENST00000622645 SPATA8Q6RVD6 105 aa6.39□□□□□ -1.39
TP53-227ENST00000622645 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
TP53-227ENST00000622645 RYR3Q15413 4870 aa6.39□□□□□ -1.39
TP53-227ENST00000622645 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
TP53-227ENST00000622645 HSPG2P98160 4391 aa6.38□□□□□ -1.39
TP53-227ENST00000622645 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
TP53-227ENST00000622645 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
TP53-227ENST00000622645 UQCR11O14957 56 aa6.37□□□□□ -1.39
TP53-227ENST00000622645 TNXBP22105 4242 aa6.36□□□□□ -1.39
TP53-227ENST00000622645 DMBT1Q9UGM3 2413 aaPredicted RBP6.36□□□□□ -1.39
TP53-227ENST00000622645 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
TP53-227ENST00000622645 RYR1P21817 5038 aa6.32□□□□□ -1.4
TP53-227ENST00000622645 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms