RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 A0A1B0GVY2 172 aa8.18□□□□□ -1.1
EPB42-210ENST00000622454 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
EPB42-210ENST00000622454 H0Y9P7 68 aa8.16□□□□□ -1.1
EPB42-210ENST00000622454 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
EPB42-210ENST00000622454 H3BPC8 53 aa8.15□□□□□ -1.1
EPB42-210ENST00000622454 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
EPB42-210ENST00000622454 LINC00208Q96KT6 92 aa8.15□□□□□ -1.1
EPB42-210ENST00000622454 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
EPB42-210ENST00000622454 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
EPB42-210ENST00000622454 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
EPB42-210ENST00000622454 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
EPB42-210ENST00000622454 SEC61GP60059 68 aa8.11□□□□□ -1.11
EPB42-210ENST00000622454 NOTCH2NLQ7Z3S9 236 aa8.11□□□□□ -1.11
EPB42-210ENST00000622454 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
EPB42-210ENST00000622454 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
EPB42-210ENST00000622454 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
EPB42-210ENST00000622454 NDUFS5O43920 106 aa8.09□□□□□ -1.12
EPB42-210ENST00000622454 SMR3BP02814 79 aaPredicted RBP8.07□□□□□ -1.12
EPB42-210ENST00000622454 LIMD2Q9BT23 127 aa8.06□□□□□ -1.12
EPB42-210ENST00000622454 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
EPB42-210ENST00000622454 C1orf195Q5TG92 126 aa8.05□□□□□ -1.12
EPB42-210ENST00000622454 V9GYY9 64 aa8.05□□□□□ -1.12
EPB42-210ENST00000622454 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
EPB42-210ENST00000622454 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
EPB42-210ENST00000622454 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
EPB42-210ENST00000622454 CYP4F30PQ9H0H9 118 aa8.03□□□□□ -1.12
EPB42-210ENST00000622454 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
EPB42-210ENST00000622454 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
EPB42-210ENST00000622454 RYR3Q15413 4870 aa8.01□□□□□ -1.13
EPB42-210ENST00000622454 SPINK1P00995 79 aa8.01□□□□□ -1.13
EPB42-210ENST00000622454 LINC00313P59037 77 aa8.01□□□□□ -1.13
EPB42-210ENST00000622454 PRR4Q16378 134 aa8.01□□□□□ -1.13
EPB42-210ENST00000622454 FP248Q71RG6 208 aaPredicted RBP7.98□□□□□ -1.13
EPB42-210ENST00000622454 PRR26Q8N8Z3 221 aa7.97□□□□□ -1.13
EPB42-210ENST00000622454 FAT1Q14517 4588 aa7.95□□□□□ -1.14
EPB42-210ENST00000622454 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
EPB42-210ENST00000622454 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
EPB42-210ENST00000622454 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
EPB42-210ENST00000622454 Q5W150 140 aa7.94□□□□□ -1.14
EPB42-210ENST00000622454 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
EPB42-210ENST00000622454 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
EPB42-210ENST00000622454 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
EPB42-210ENST00000622454 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
EPB42-210ENST00000622454 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
EPB42-210ENST00000622454 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
EPB42-210ENST00000622454 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
EPB42-210ENST00000622454 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.15
EPB42-210ENST00000622454 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
EPB42-210ENST00000622454 MPLKIPQ8TAP9 179 aa7.87□□□□□ -1.15
EPB42-210ENST00000622454 HSPG2P98160 4391 aa7.81□□□□□ -1.16
EPB42-210ENST00000622454 Q1T7F1 81 aa7.81□□□□□ -1.16
EPB42-210ENST00000622454 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
EPB42-210ENST00000622454 Q5VSD8 79 aa7.8□□□□□ -1.16
EPB42-210ENST00000622454 COA5Q86WW8 74 aa7.8□□□□□ -1.16
EPB42-210ENST00000622454 IGKV2-30P06310 120 aa7.78□□□□□ -1.16
EPB42-210ENST00000622454 PMAIP1Q13794 54 aa7.77□□□□□ -1.17
EPB42-210ENST00000622454 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
EPB42-210ENST00000622454 HRES1P13985 223 aa7.74□□□□□ -1.17
EPB42-210ENST00000622454 RYR1P21817 5038 aa7.73□□□□□ -1.17
EPB42-210ENST00000622454 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
EPB42-210ENST00000622454 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
EPB42-210ENST00000622454 KIAA1109Q2LD37 5005 aa7.7□□□□□ -1.18
EPB42-210ENST00000622454 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
EPB42-210ENST00000622454 ACYP2P14621 99 aa7.68□□□□□ -1.18
EPB42-210ENST00000622454 PSPHP1O15172 72 aa7.68□□□□□ -1.18
EPB42-210ENST00000622454 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
EPB42-210ENST00000622454 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
EPB42-210ENST00000622454 FLG2Q5D862 2391 aaPredicted RBP7.67□□□□□ -1.18
EPB42-210ENST00000622454 LRP1Q07954 4544 aaKnown RBP7.67□□□□□ -1.18
EPB42-210ENST00000622454 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
EPB42-210ENST00000622454 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
EPB42-210ENST00000622454 Q8N1X5 172 aa7.64□□□□□ -1.19
EPB42-210ENST00000622454 A8MUN3 132 aa7.64□□□□□ -1.19
EPB42-210ENST00000622454 A8MUU9 505 aa7.64□□□□□ -1.19
EPB42-210ENST00000622454 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
EPB42-210ENST00000622454 TNXBP22105 4242 aa7.61□□□□□ -1.19
EPB42-210ENST00000622454 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
EPB42-210ENST00000622454 Q5VV11 94 aa7.59□□□□□ -1.19
EPB42-210ENST00000622454 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
EPB42-210ENST00000622454 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
EPB42-210ENST00000622454 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
EPB42-210ENST00000622454 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
EPB42-210ENST00000622454 Q75L30 129 aa7.53□□□□□ -1.2
EPB42-210ENST00000622454 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
EPB42-210ENST00000622454 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
EPB42-210ENST00000622454 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
EPB42-210ENST00000622454 SPINK7P58062 85 aa7.47□□□□□ -1.21
EPB42-210ENST00000622454 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
EPB42-210ENST00000622454 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.22
EPB42-210ENST00000622454 A6NED7 52 aa7.43□□□□□ -1.22
EPB42-210ENST00000622454 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
EPB42-210ENST00000622454 A8MU10 97 aa7.41□□□□□ -1.22
EPB42-210ENST00000622454 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
EPB42-210ENST00000622454 A0A1B0GU69 56 aa7.38□□□□□ -1.23
EPB42-210ENST00000622454 XP32Q5T750 250 aa7.38□□□□□ -1.23
EPB42-210ENST00000622454 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
EPB42-210ENST00000622454 LCA10Q71F78 164 aa7.35□□□□□ -1.23
EPB42-210ENST00000622454 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
EPB42-210ENST00000622454 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
EPB42-210ENST00000622454 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms