RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 TMEM167BQ9NRX6 74 aa1.17□□□□□ -2.22
LRRC39-204ENST00000620882 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
LRRC39-204ENST00000620882 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
LRRC39-204ENST00000620882 CHD7Q9P2D1 2997 aa1.16□□□□□ -2.22
LRRC39-204ENST00000620882 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
LRRC39-204ENST00000620882 DUOX1Q9NRD9 1551 aa1.15□□□□□ -2.22
LRRC39-204ENST00000620882 HERC2O95714 4834 aa1.15□□□□□ -2.23
LRRC39-204ENST00000620882 CCL22O00626 93 aa1.15□□□□□ -2.23
LRRC39-204ENST00000620882 SMIM2Q9BVW6 85 aa1.15□□□□□ -2.23
LRRC39-204ENST00000620882 FLNAP21333 2647 aaKnown RBP1.14□□□□□ -2.23
LRRC39-204ENST00000620882 Q5VSD8 79 aa1.14□□□□□ -2.23
LRRC39-204ENST00000620882 ZFYVE26Q68DK2 2539 aa1.13□□□□□ -2.23
LRRC39-204ENST00000620882 WDFY4Q6ZS81 3184 aa1.13□□□□□ -2.23
LRRC39-204ENST00000620882 SPENQ96T58 3664 aaKnown RBP1.12□□□□□ -2.23
LRRC39-204ENST00000620882 SRRM2Q9UQ35 2752 aaKnown RBP1.12□□□□□ -2.23
LRRC39-204ENST00000620882 WFDC10BQ8IUB3 73 aa1.12□□□□□ -2.23
LRRC39-204ENST00000620882 NDUFA1O15239 70 aa1.12□□□□□ -2.23
LRRC39-204ENST00000620882 KAAG1Q9UBP8 84 aa1.12□□□□□ -2.23
LRRC39-204ENST00000620882 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
LRRC39-204ENST00000620882 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
LRRC39-204ENST00000620882 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
LRRC39-204ENST00000620882 ITPR1Q14643 2758 aa1.11□□□□□ -2.23
LRRC39-204ENST00000620882 SPTA1P02549 2419 aa1.11□□□□□ -2.23
LRRC39-204ENST00000620882 DNHD1Q96M86 4753 aa1.1□□□□□ -2.23
LRRC39-204ENST00000620882 UBR5O95071 2799 aaPredicted RBP1.1□□□□□ -2.23
LRRC39-204ENST00000620882 RNF213Q63HN8 5207 aa1.09□□□□□ -2.23
LRRC39-204ENST00000620882 CEP290O15078 2479 aa1.09□□□□□ -2.23
LRRC39-204ENST00000620882 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.24
LRRC39-204ENST00000620882 EP300Q09472 2414 aaPredicted RBP1.07□□□□□ -2.24
LRRC39-204ENST00000620882 WT1-ASQ06250 92 aa1.07□□□□□ -2.24
LRRC39-204ENST00000620882 USP9YO00507 2555 aaPredicted RBP1.07□□□□□ -2.24
LRRC39-204ENST00000620882 GCC2Q8IWJ2 1684 aa1.07□□□□□ -2.24
LRRC39-204ENST00000620882 KALRNO60229 2985 aa1.06□□□□□ -2.24
LRRC39-204ENST00000620882 APCP25054 2843 aa1.06□□□□□ -2.24
LRRC39-204ENST00000620882 STAB2Q8WWQ8 2551 aa1.05□□□□□ -2.24
LRRC39-204ENST00000620882 CEP350Q5VT06 3117 aa1.05□□□□□ -2.24
LRRC39-204ENST00000620882 CLTCL1P53675 1640 aa1.05□□□□□ -2.24
LRRC39-204ENST00000620882 SPTBN5Q9NRC6 3674 aaKnown RBP1.05□□□□□ -2.24
LRRC39-204ENST00000620882 PRLHP81277 87 aa1.05□□□□□ -2.24
LRRC39-204ENST00000620882 S4R3F8 94 aa1.05□□□□□ -2.24
LRRC39-204ENST00000620882 MYO9AB2RTY4 2548 aa1.04□□□□□ -2.24
LRRC39-204ENST00000620882 SRCAPQ6ZRS2 3230 aa1.04□□□□□ -2.24
LRRC39-204ENST00000620882 RPL39P62891 51 aaKnown RBP1.03□□□□□ -2.24
LRRC39-204ENST00000620882 NBASA2RRP1 2371 aa1.03□□□□□ -2.24
LRRC39-204ENST00000620882 RELNP78509 3460 aa1.03□□□□□ -2.24
LRRC39-204ENST00000620882 ZZEF1O43149 2961 aa1.03□□□□□ -2.24
LRRC39-204ENST00000620882 LYSTQ99698 3801 aa1.03□□□□□ -2.24
LRRC39-204ENST00000620882 NBEAL1Q6ZS30 2694 aa1.03□□□□□ -2.24
LRRC39-204ENST00000620882 FLNCQ14315 2725 aa1.03□□□□□ -2.25
LRRC39-204ENST00000620882 UTP20O75691 2785 aaKnown RBP1.02□□□□□ -2.25
LRRC39-204ENST00000620882 ZFHX4Q86UP3 3567 aa1.02□□□□□ -2.25
LRRC39-204ENST00000620882 DCHS2Q6V1P9 2916 aa1.02□□□□□ -2.25
LRRC39-204ENST00000620882 DEFB106AQ8N104 65 aa1.01□□□□□ -2.25
LRRC39-204ENST00000620882 MGAQ8IWI9 3026 aa1.01□□□□□ -2.25
LRRC39-204ENST00000620882 MMP24-AS1A0A0U1RRL7 71 aa1.01□□□□□ -2.25
LRRC39-204ENST00000620882 CELSR3Q9NYQ7 3312 aa1□□□□□ -2.25
LRRC39-204ENST00000620882 IGLV5-48A0A075B6I7 105 aa0.99□□□□□ -2.25
LRRC39-204ENST00000620882 FAT2Q9NYQ8 4349 aa0.99□□□□□ -2.25
LRRC39-204ENST00000620882 LEAP2Q969E1 77 aa0.99□□□□□ -2.25
LRRC39-204ENST00000620882 RPL39LQ96EH5 51 aaKnown RBP0.99□□□□□ -2.25
LRRC39-204ENST00000620882 CRYBG3Q68DQ2 2970 aa0.98□□□□□ -2.25
LRRC39-204ENST00000620882 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
LRRC39-204ENST00000620882 KRTAP4-1Q9BYQ7 146 aa0.97□□□□□ -2.25
LRRC39-204ENST00000620882 TTTY10Q9BZA0 68 aa0.97□□□□□ -2.25
LRRC39-204ENST00000620882 COL12A1Q99715 3063 aa0.97□□□□□ -2.25
LRRC39-204ENST00000620882 FRYQ5TBA9 3013 aa0.97□□□□□ -2.25
LRRC39-204ENST00000620882 RANBP2P49792 3224 aaKnown RBP0.96□□□□□ -2.25
LRRC39-204ENST00000620882 PKD1L1Q8TDX9 2849 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 WNK1Q9H4A3 2382 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 CUBNO60494 3623 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 POLR2KP53803 58 aaKnown RBP0.96□□□□□ -2.26
LRRC39-204ENST00000620882 DEFB109BQ30KR1 87 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 ARHGAP5-AS1Q96IT6 56 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 NF1P21359 2839 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 RIF1Q5UIP0 2472 aaKnown RBP0.96□□□□□ -2.26
LRRC39-204ENST00000620882 DNAH11Q96DT5 4516 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 DMBT1Q9UGM3 2413 aaPredicted RBP0.96□□□□□ -2.26
LRRC39-204ENST00000620882 A8MTW9 85 aa0.96□□□□□ -2.26
LRRC39-204ENST00000620882 SPINK1P00995 79 aa0.95□□□□□ -2.26
LRRC39-204ENST00000620882 FRAS1Q86XX4 4008 aa0.95□□□□□ -2.26
LRRC39-204ENST00000620882 NBPF19A0A087WUL8 3843 aa0.95□□□□□ -2.26
LRRC39-204ENST00000620882 DMXL1Q9Y485 3027 aa0.94□□□□□ -2.26
LRRC39-204ENST00000620882 CEP295Q9C0D2 2601 aa0.94□□□□□ -2.26
LRRC39-204ENST00000620882 TEX15Q9BXT5 2789 aa0.94□□□□□ -2.26
LRRC39-204ENST00000620882 ACACAQ13085 2346 aa0.93□□□□□ -2.26
LRRC39-204ENST00000620882 H3BSH0 61 aa0.92□□□□□ -2.26
LRRC39-204ENST00000620882 DEFB104AQ8WTQ1 72 aa0.92□□□□□ -2.26
LRRC39-204ENST00000620882 SZT2Q5T011 3432 aa0.92□□□□□ -2.26
LRRC39-204ENST00000620882 CFAP54Q96N23 3096 aa0.92□□□□□ -2.26
LRRC39-204ENST00000620882 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
LRRC39-204ENST00000620882 TLN1Q9Y490 2541 aaKnown RBP0.92□□□□□ -2.26
LRRC39-204ENST00000620882 CFAP46Q8IYW2 2715 aa0.92□□□□□ -2.26
LRRC39-204ENST00000620882 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
LRRC39-204ENST00000620882 SMR3AQ99954 134 aa0.91□□□□□ -2.26
LRRC39-204ENST00000620882 ACANP16112 2415 aa0.91□□□□□ -2.26
LRRC39-204ENST00000620882 CLPSL2Q6UWE3 100 aa0.9□□□□□ -2.26
LRRC39-204ENST00000620882 KMT2AQ03164 3969 aa0.9□□□□□ -2.26
LRRC39-204ENST00000620882 TACC2O95359 2948 aa0.9□□□□□ -2.27
LRRC39-204ENST00000620882 H3BUA1 57 aa0.89□□□□□ -2.27
LRRC39-204ENST00000620882 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 267.4 ms