RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 IGKV4-1P06312 121 aa3.16□□□□□ -1.9
SHMT1-211ENST00000618902 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
SHMT1-211ENST00000618902 A0A0U1RQV1 116 aa3.15□□□□□ -1.91
SHMT1-211ENST00000618902 SPRR1BP22528 89 aa3.15□□□□□ -1.91
SHMT1-211ENST00000618902 FAM229BQ4G0N7 80 aa3.15□□□□□ -1.91
SHMT1-211ENST00000618902 DEFB105AQ8NG35 78 aa3.15□□□□□ -1.91
SHMT1-211ENST00000618902 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
SHMT1-211ENST00000618902 Q9BRP9 147 aa3.14□□□□□ -1.91
SHMT1-211ENST00000618902 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
SHMT1-211ENST00000618902 PRLHP81277 87 aa3.13□□□□□ -1.91
SHMT1-211ENST00000618902 ZNF706Q9Y5V0 76 aaPredicted RBP3.13□□□□□ -1.91
SHMT1-211ENST00000618902 V9GYY9 64 aa3.13□□□□□ -1.91
SHMT1-211ENST00000618902 hDV103S1A0JD37 113 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 HCG22E2RYF7 251 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 UBE2AP49459 152 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 MP68P56378 58 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 SMIM29Q86T20 159 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 ANAPC11Q9NYG5 84 aa3.12□□□□□ -1.91
SHMT1-211ENST00000618902 Q5XG85 94 aa3.11□□□□□ -1.91
SHMT1-211ENST00000618902 SPAG11AQ6PDA7 123 aa3.11□□□□□ -1.91
SHMT1-211ENST00000618902 PRR26Q8N8Z3 221 aa3.11□□□□□ -1.91
SHMT1-211ENST00000618902 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
SHMT1-211ENST00000618902 MUC2Q02817 5179 aa3.1□□□□□ -1.91
SHMT1-211ENST00000618902 DSCR10P59022 87 aa3.1□□□□□ -1.91
SHMT1-211ENST00000618902 SPANXA2-OT1Q8N9U9 137 aa3.1□□□□□ -1.91
SHMT1-211ENST00000618902 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
SHMT1-211ENST00000618902 TP53AIP1Q9HCN2 124 aa3.1□□□□□ -1.91
SHMT1-211ENST00000618902 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
SHMT1-211ENST00000618902 A0A087X002 238 aa3.09□□□□□ -1.91
SHMT1-211ENST00000618902 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
SHMT1-211ENST00000618902 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
SHMT1-211ENST00000618902 ZCCHC13Q8WW36 166 aaKnown RBP3.09□□□□□ -1.91
SHMT1-211ENST00000618902 HIGD2AQ9BW72 106 aa3.09□□□□□ -1.91
SHMT1-211ENST00000618902 LPAP08519 4548 aa3.09□□□□□ -1.92
SHMT1-211ENST00000618902 A8MWP4 228 aa3.08□□□□□ -1.92
SHMT1-211ENST00000618902 RPS29P62273 56 aaKnown RBP3.08□□□□□ -1.92
SHMT1-211ENST00000618902 Q1T7F1 81 aa3.08□□□□□ -1.92
SHMT1-211ENST00000618902 PRR15Q8IV56 129 aa3.08□□□□□ -1.92
SHMT1-211ENST00000618902 ST20-AS1Q8NBB2 130 aa3.08□□□□□ -1.92
SHMT1-211ENST00000618902 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
SHMT1-211ENST00000618902 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
SHMT1-211ENST00000618902 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
SHMT1-211ENST00000618902 LINC00472Q9H8W2 130 aa3.07□□□□□ -1.92
SHMT1-211ENST00000618902 A0A087WSZ3 146 aa3.06□□□□□ -1.92
SHMT1-211ENST00000618902 K7EQZ3 153 aa3.06□□□□□ -1.92
SHMT1-211ENST00000618902 SPINK1P00995 79 aa3.06□□□□□ -1.92
SHMT1-211ENST00000618902 LINC00483Q53H64 154 aa3.06□□□□□ -1.92
SHMT1-211ENST00000618902 SSBP3-AS1Q7Z2R9 100 aa3.06□□□□□ -1.92
SHMT1-211ENST00000618902 Q8N9L7 120 aa3.06□□□□□ -1.92
SHMT1-211ENST00000618902 HRCT1Q6UXD1 115 aa3.05□□□□□ -1.92
SHMT1-211ENST00000618902 CASC2Q6XLA1 102 aa3.05□□□□□ -1.92
SHMT1-211ENST00000618902 FP248Q71RG6 208 aaPredicted RBP3.05□□□□□ -1.92
SHMT1-211ENST00000618902 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
SHMT1-211ENST00000618902 CD164Q04900 197 aa3.04□□□□□ -1.92
SHMT1-211ENST00000618902 MOBPQ13875 183 aa3.04□□□□□ -1.92
SHMT1-211ENST00000618902 LIMD2Q9BT23 127 aa3.04□□□□□ -1.92
SHMT1-211ENST00000618902 TRAV22A0A0B4J277 110 aa3.03□□□□□ -1.92
SHMT1-211ENST00000618902 C1orf64Q8NEQ6 169 aa3.03□□□□□ -1.92
SHMT1-211ENST00000618902 IGLV7-46A0A075B6I9 117 aa3.02□□□□□ -1.93
SHMT1-211ENST00000618902 SEC61GP60059 68 aa3.02□□□□□ -1.93
SHMT1-211ENST00000618902 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
SHMT1-211ENST00000618902 ASB16-AS1Q495Z4 193 aa3.02□□□□□ -1.93
SHMT1-211ENST00000618902 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
SHMT1-211ENST00000618902 H0Y9P7 68 aa3.01□□□□□ -1.93
SHMT1-211ENST00000618902 LINC00208Q96KT6 92 aa3.01□□□□□ -1.93
SHMT1-211ENST00000618902 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
SHMT1-211ENST00000618902 A0A0G2JQZ4 141 aa3□□□□□ -1.93
SHMT1-211ENST00000618902 PRR4Q16378 134 aa3□□□□□ -1.93
SHMT1-211ENST00000618902 WFDC13Q8IUB5 93 aa3□□□□□ -1.93
SHMT1-211ENST00000618902 C8orf87E5RJ46 101 aa2.99□□□□□ -1.93
SHMT1-211ENST00000618902 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
SHMT1-211ENST00000618902 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
SHMT1-211ENST00000618902 MPLKIPQ8TAP9 179 aa2.98□□□□□ -1.93
SHMT1-211ENST00000618902 RETNLBQ9BQ08 111 aa2.98□□□□□ -1.93
SHMT1-211ENST00000618902 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
SHMT1-211ENST00000618902 LOC101927531A0A1B0GV80 90 aa2.97□□□□□ -1.93
SHMT1-211ENST00000618902 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
SHMT1-211ENST00000618902 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
SHMT1-211ENST00000618902 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.94
SHMT1-211ENST00000618902 Q96NJ1 140 aa2.96□□□□□ -1.94
SHMT1-211ENST00000618902 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
SHMT1-211ENST00000618902 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
SHMT1-211ENST00000618902 ACYP2P14621 99 aa2.94□□□□□ -1.94
SHMT1-211ENST00000618902 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
SHMT1-211ENST00000618902 SEC61BP60468 96 aaKnown RBP2.93□□□□□ -1.94
SHMT1-211ENST00000618902 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
SHMT1-211ENST00000618902 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
SHMT1-211ENST00000618902 IGHV6-1A0A0B4J1U7 121 aa2.92□□□□□ -1.94
SHMT1-211ENST00000618902 NDUFS5O43920 106 aa2.92□□□□□ -1.94
SHMT1-211ENST00000618902 KRTAP13-3Q3SY46 172 aa2.92□□□□□ -1.94
SHMT1-211ENST00000618902 Q75L30 129 aa2.92□□□□□ -1.94
SHMT1-211ENST00000618902 COA5Q86WW8 74 aa2.92□□□□□ -1.94
SHMT1-211ENST00000618902 LINC00313P59037 77 aa2.91□□□□□ -1.94
SHMT1-211ENST00000618902 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
SHMT1-211ENST00000618902 CHKB-CPT1BH3BT56 60 aa2.9□□□□□ -1.95
SHMT1-211ENST00000618902 XP32Q5T750 250 aa2.9□□□□□ -1.95
SHMT1-211ENST00000618902 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
SHMT1-211ENST00000618902 A8MUN3 132 aa2.89□□□□□ -1.95
SHMT1-211ENST00000618902 PSPHP1O15172 72 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms