RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TACC2O95359 2948 aa6.34□□□□□ -1.4
CCDC144B-208ENST00000618081 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
CCDC144B-208ENST00000618081 VCANP13611 3396 aa6.33□□□□□ -1.4
CCDC144B-208ENST00000618081 CELSR2Q9HCU4 2923 aa6.33□□□□□ -1.4
CCDC144B-208ENST00000618081 TNP1P09430 55 aa6.31□□□□□ -1.4
CCDC144B-208ENST00000618081 ZZEF1O43149 2961 aa6.31□□□□□ -1.4
CCDC144B-208ENST00000618081 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
CCDC144B-208ENST00000618081 SPEGQ15772 3267 aa6.31□□□□□ -1.4
CCDC144B-208ENST00000618081 CFAP47Q6ZTR5 3102 aa6.28□□□□□ -1.4
CCDC144B-208ENST00000618081 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
CCDC144B-208ENST00000618081 NF1P21359 2839 aa6.25□□□□□ -1.41
CCDC144B-208ENST00000618081 NBEAQ8NFP9 2946 aa6.25□□□□□ -1.41
CCDC144B-208ENST00000618081 A8MU10 97 aa6.24□□□□□ -1.41
CCDC144B-208ENST00000618081 ADGRG4Q8IZF6 3080 aa6.24□□□□□ -1.41
CCDC144B-208ENST00000618081 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
CCDC144B-208ENST00000618081 TNRC18O15417 2968 aaPredicted RBP6.21□□□□□ -1.41
CCDC144B-208ENST00000618081 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
CCDC144B-208ENST00000618081 SZT2Q5T011 3432 aa6.2□□□□□ -1.42
CCDC144B-208ENST00000618081 SPTBN5Q9NRC6 3674 aaKnown RBP6.19□□□□□ -1.42
CCDC144B-208ENST00000618081 ATMQ13315 3056 aa6.18□□□□□ -1.42
CCDC144B-208ENST00000618081 NIPBLQ6KC79 2804 aaeCLIP6.18□□□□□ -1.42
CCDC144B-208ENST00000618081 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
CCDC144B-208ENST00000618081 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
CCDC144B-208ENST00000618081 A6NN06 94 aa6.17□□□□□ -1.42
CCDC144B-208ENST00000618081 DCHS2Q6V1P9 2916 aa6.17□□□□□ -1.42
CCDC144B-208ENST00000618081 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
CCDC144B-208ENST00000618081 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
CCDC144B-208ENST00000618081 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
CCDC144B-208ENST00000618081 DMXL1Q9Y485 3027 aa6.12□□□□□ -1.43
CCDC144B-208ENST00000618081 CELSR1Q9NYQ6 3014 aa6.11□□□□□ -1.43
CCDC144B-208ENST00000618081 TENM4Q6N022 2769 aa6.11□□□□□ -1.43
CCDC144B-208ENST00000618081 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
CCDC144B-208ENST00000618081 EYSQ5T1H1 3165 aa6.1□□□□□ -1.43
CCDC144B-208ENST00000618081 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
CCDC144B-208ENST00000618081 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
CCDC144B-208ENST00000618081 NBPF19A0A087WUL8 3843 aa6.06□□□□□ -1.44
CCDC144B-208ENST00000618081 ZANQ9Y493 2812 aa6.06□□□□□ -1.44
CCDC144B-208ENST00000618081 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
CCDC144B-208ENST00000618081 FBN2P35556 2912 aa6.03□□□□□ -1.44
CCDC144B-208ENST00000618081 TGP01266 2768 aa6.01□□□□□ -1.45
CCDC144B-208ENST00000618081 WDFY3Q8IZQ1 3526 aa6□□□□□ -1.45
CCDC144B-208ENST00000618081 XP32Q5T750 250 aa5.99□□□□□ -1.45
CCDC144B-208ENST00000618081 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
CCDC144B-208ENST00000618081 PDZD2O15018 2839 aa5.95□□□□□ -1.46
CCDC144B-208ENST00000618081 HRNRQ86YZ3 2850 aaPredicted RBP5.94□□□□□ -1.46
CCDC144B-208ENST00000618081 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
CCDC144B-208ENST00000618081 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
CCDC144B-208ENST00000618081 PKD1L1Q8TDX9 2849 aa5.92□□□□□ -1.46
CCDC144B-208ENST00000618081 VWFP04275 2813 aa5.91□□□□□ -1.46
CCDC144B-208ENST00000618081 ASPMQ8IZT6 3477 aa5.89□□□□□ -1.47
CCDC144B-208ENST00000618081 LOC400499M0QZD8 3231 aa5.87□□□□□ -1.47
CCDC144B-208ENST00000618081 MYO15AQ9UKN7 3530 aa5.87□□□□□ -1.47
CCDC144B-208ENST00000618081 MXRA5Q9NR99 2828 aa5.86□□□□□ -1.47
CCDC144B-208ENST00000618081 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
CCDC144B-208ENST00000618081 H0YAA0 97 aa5.84□□□□□ -1.47
CCDC144B-208ENST00000618081 P0C880 135 aa5.82□□□□□ -1.48
CCDC144B-208ENST00000618081 LAMA5O15230 3695 aa5.82□□□□□ -1.48
CCDC144B-208ENST00000618081 ZFHX4Q86UP3 3567 aa5.82□□□□□ -1.48
CCDC144B-208ENST00000618081 TENM2Q9NT68 2774 aa5.79□□□□□ -1.48
CCDC144B-208ENST00000618081 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
CCDC144B-208ENST00000618081 ZFHX3Q15911 3703 aa5.75□□□□□ -1.49
CCDC144B-208ENST00000618081 DCHS1Q96JQ0 3298 aa5.66□□□□□ -1.5
CCDC144B-208ENST00000618081 SPENQ96T58 3664 aaKnown RBP5.65□□□□□ -1.5
CCDC144B-208ENST00000618081 RELNP78509 3460 aa5.65□□□□□ -1.51
CCDC144B-208ENST00000618081 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
CCDC144B-208ENST00000618081 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
CCDC144B-208ENST00000618081 SMG1Q96Q15 3661 aaKnown RBP5.58□□□□□ -1.52
CCDC144B-208ENST00000618081 DMDP11532 3685 aa5.56□□□□□ -1.52
CCDC144B-208ENST00000618081 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
CCDC144B-208ENST00000618081 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
CCDC144B-208ENST00000618081 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
CCDC144B-208ENST00000618081 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
CCDC144B-208ENST00000618081 FBN1P35555 2871 aaKnown RBP5.46□□□□□ -1.54
CCDC144B-208ENST00000618081 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
CCDC144B-208ENST00000618081 FBN3Q75N90 2809 aa5.4□□□□□ -1.55
CCDC144B-208ENST00000618081 VPS13CQ709C8 3753 aa5.39□□□□□ -1.55
CCDC144B-208ENST00000618081 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
CCDC144B-208ENST00000618081 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
CCDC144B-208ENST00000618081 SVEP1Q4LDE5 3571 aa5.33□□□□□ -1.56
CCDC144B-208ENST00000618081 CUBNO60494 3623 aa5.3□□□□□ -1.56
CCDC144B-208ENST00000618081 BSNQ9UPA5 3926 aa5.23□□□□□ -1.57
CCDC144B-208ENST00000618081 MUC3AQ02505 3323 aa5.22□□□□□ -1.57
CCDC144B-208ENST00000618081 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.57
CCDC144B-208ENST00000618081 AKAP9Q99996 3911 aa5.18□□□□□ -1.58
CCDC144B-208ENST00000618081 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
CCDC144B-208ENST00000618081 INE1O15225 51 aa5.14□□□□□ -1.59
CCDC144B-208ENST00000618081 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
CCDC144B-208ENST00000618081 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
CCDC144B-208ENST00000618081 CSMD2Q7Z408 3487 aa5.11□□□□□ -1.59
CCDC144B-208ENST00000618081 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
CCDC144B-208ENST00000618081 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
CCDC144B-208ENST00000618081 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
CCDC144B-208ENST00000618081 ANK3Q12955 4377 aaKnown RBP4.94□□□□□ -1.62
CCDC144B-208ENST00000618081 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
CCDC144B-208ENST00000618081 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
CCDC144B-208ENST00000618081 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
CCDC144B-208ENST00000618081 ZNF469Q96JG9 3925 aaPredicted RBP4.9□□□□□ -1.63
CCDC144B-208ENST00000618081 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
CCDC144B-208ENST00000618081 KRTAP3-2Q9BYR7 98 aa4.83□□□□□ -1.64
CCDC144B-208ENST00000618081 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms