RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 OXTP01178 125 aa10.75□□□□□ -0.69
AC008878.3-201ENST00000617428 NOTCH2NLQ7Z3S9 236 aa10.7□□□□□ -0.7
AC008878.3-201ENST00000617428 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
AC008878.3-201ENST00000617428 M0QZ58 72 aa10.67□□□□□ -0.7
AC008878.3-201ENST00000617428 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
AC008878.3-201ENST00000617428 Q5VV11 94 aa10.66□□□□□ -0.7
AC008878.3-201ENST00000617428 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
AC008878.3-201ENST00000617428 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
AC008878.3-201ENST00000617428 NF1P21359 2839 aa10.62□□□□□ -0.71
AC008878.3-201ENST00000617428 Q5XG85 94 aa10.62□□□□□ -0.71
AC008878.3-201ENST00000617428 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
AC008878.3-201ENST00000617428 PRAC1Q96KF2 57 aa10.57□□□□□ -0.72
AC008878.3-201ENST00000617428 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
AC008878.3-201ENST00000617428 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
AC008878.3-201ENST00000617428 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
AC008878.3-201ENST00000617428 ASB16-AS1Q495Z4 193 aa10.54□□□□□ -0.72
AC008878.3-201ENST00000617428 H1FX-AS1Q4G0G2 97 aa10.53□□□□□ -0.72
AC008878.3-201ENST00000617428 FBN2P35556 2912 aa10.53□□□□□ -0.72
AC008878.3-201ENST00000617428 RPS29P62273 56 aaKnown RBP10.53□□□□□ -0.72
AC008878.3-201ENST00000617428 USP34Q70CQ2 3546 aa10.52□□□□□ -0.73
AC008878.3-201ENST00000617428 KRTAP13-1Q8IUC0 172 aa10.5□□□□□ -0.73
AC008878.3-201ENST00000617428 MYO15AQ9UKN7 3530 aa10.49□□□□□ -0.73
AC008878.3-201ENST00000617428 SPATA8Q6RVD6 105 aa10.48□□□□□ -0.73
AC008878.3-201ENST00000617428 PLAC4Q8WY50 150 aa10.45□□□□□ -0.74
AC008878.3-201ENST00000617428 PKD1L1Q8TDX9 2849 aa10.41□□□□□ -0.74
AC008878.3-201ENST00000617428 ROMO1P60602 79 aa10.39□□□□□ -0.75
AC008878.3-201ENST00000617428 TENM2Q9NT68 2774 aa10.39□□□□□ -0.75
AC008878.3-201ENST00000617428 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
AC008878.3-201ENST00000617428 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
AC008878.3-201ENST00000617428 C20orf166-AS1Q96NR2 134 aa10.29□□□□□ -0.76
AC008878.3-201ENST00000617428 A8MUU9 505 aa10.27□□□□□ -0.76
AC008878.3-201ENST00000617428 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
AC008878.3-201ENST00000617428 MUC3AQ02505 3323 aa10.19□□□□□ -0.78
AC008878.3-201ENST00000617428 CELSR1Q9NYQ6 3014 aa10.18□□□□□ -0.78
AC008878.3-201ENST00000617428 A8MU10 97 aa10.18□□□□□ -0.78
AC008878.3-201ENST00000617428 VWFP04275 2813 aa10.16□□□□□ -0.78
AC008878.3-201ENST00000617428 RELNP78509 3460 aa10.11□□□□□ -0.79
AC008878.3-201ENST00000617428 KRTAP1-4P0C5Y4 121 aa10.09□□□□□ -0.79
AC008878.3-201ENST00000617428 WDFY3Q8IZQ1 3526 aa10.08□□□□□ -0.8
AC008878.3-201ENST00000617428 A0A0A0MQY5 61 aa10.04□□□□□ -0.8
AC008878.3-201ENST00000617428 LAMA5O15230 3695 aa10□□□□□ -0.81
AC008878.3-201ENST00000617428 TGP01266 2768 aa10□□□□□ -0.81
AC008878.3-201ENST00000617428 SRRM2Q9UQ35 2752 aaKnown RBP9.99□□□□□ -0.81
AC008878.3-201ENST00000617428 XP32Q5T750 250 aa9.98□□□□□ -0.81
AC008878.3-201ENST00000617428 PDZD2O15018 2839 aa9.97□□□□□ -0.81
AC008878.3-201ENST00000617428 ASPMQ8IZT6 3477 aa9.95□□□□□ -0.82
AC008878.3-201ENST00000617428 FBN1P35555 2871 aaKnown RBP9.9□□□□□ -0.83
AC008878.3-201ENST00000617428 DMDP11532 3685 aa9.88□□□□□ -0.83
AC008878.3-201ENST00000617428 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
AC008878.3-201ENST00000617428 TNP1P09430 55 aa9.82□□□□□ -0.84
AC008878.3-201ENST00000617428 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
AC008878.3-201ENST00000617428 H3BS24 57 aa9.8□□□□□ -0.84
AC008878.3-201ENST00000617428 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
AC008878.3-201ENST00000617428 A6NN06 94 aa9.8□□□□□ -0.84
AC008878.3-201ENST00000617428 ZFHX4Q86UP3 3567 aa9.75□□□□□ -0.85
AC008878.3-201ENST00000617428 KRTAP10-8P60410 259 aa9.71□□□□□ -0.85
AC008878.3-201ENST00000617428 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
AC008878.3-201ENST00000617428 KRTAP16-1A8MUX0 517 aa9.65□□□□□ -0.87
AC008878.3-201ENST00000617428 KRTAP10-10P60014 251 aa9.63□□□□□ -0.87
AC008878.3-201ENST00000617428 OTOGQ6ZRI0 2925 aa9.62□□□□□ -0.87
AC008878.3-201ENST00000617428 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
AC008878.3-201ENST00000617428 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
AC008878.3-201ENST00000617428 SMG1Q96Q15 3661 aaKnown RBP9.49□□□□□ -0.89
AC008878.3-201ENST00000617428 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.89
AC008878.3-201ENST00000617428 NDUFAF8A1L188 74 aa9.45□□□□□ -0.9
AC008878.3-201ENST00000617428 H0YAA0 97 aa9.45□□□□□ -0.9
AC008878.3-201ENST00000617428 P0C880 135 aa9.44□□□□□ -0.9
AC008878.3-201ENST00000617428 PP632Q6XCG6 107 aa9.41□□□□□ -0.9
AC008878.3-201ENST00000617428 CSMD1Q96PZ7 3565 aa9.39□□□□□ -0.91
AC008878.3-201ENST00000617428 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
AC008878.3-201ENST00000617428 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
AC008878.3-201ENST00000617428 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
AC008878.3-201ENST00000617428 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
AC008878.3-201ENST00000617428 CSMD2Q7Z408 3487 aa9.22□□□□□ -0.93
AC008878.3-201ENST00000617428 CUBNO60494 3623 aa9.21□□□□□ -0.94
AC008878.3-201ENST00000617428 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
AC008878.3-201ENST00000617428 MEGF8Q7Z7M0 2845 aa9.16□□□□□ -0.94
AC008878.3-201ENST00000617428 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
AC008878.3-201ENST00000617428 BSNQ9UPA5 3926 aa8.94□□□□□ -0.98
AC008878.3-201ENST00000617428 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
AC008878.3-201ENST00000617428 TRRAPQ9Y4A5 3859 aa8.91□□□□□ -0.98
AC008878.3-201ENST00000617428 ANK3Q12955 4377 aaKnown RBP8.84□□□□□ -0.99
AC008878.3-201ENST00000617428 MT1HL1P0DM35 61 aa8.81□□□□□ -1
AC008878.3-201ENST00000617428 KRTAP12-1P59990 96 aa8.81□□□□□ -1
AC008878.3-201ENST00000617428 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
AC008878.3-201ENST00000617428 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
AC008878.3-201ENST00000617428 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
AC008878.3-201ENST00000617428 KRTAP10-4P60372 401 aaPredicted RBP8.53□□□□□ -1.04
AC008878.3-201ENST00000617428 VPS13CQ709C8 3753 aa8.47□□□□□ -1.05
AC008878.3-201ENST00000617428 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
AC008878.3-201ENST00000617428 ZNF469Q96JG9 3925 aaPredicted RBP8.4□□□□□ -1.06
AC008878.3-201ENST00000617428 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
AC008878.3-201ENST00000617428 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
AC008878.3-201ENST00000617428 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
AC008878.3-201ENST00000617428 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
AC008878.3-201ENST00000617428 CRCT1Q9UGL9 99 aa8.1□□□□□ -1.11
AC008878.3-201ENST00000617428 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
AC008878.3-201ENST00000617428 CSMD3Q7Z407 3707 aa8.09□□□□□ -1.11
AC008878.3-201ENST00000617428 AKAP9Q99996 3911 aa8.08□□□□□ -1.12
AC008878.3-201ENST00000617428 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms