RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 NDUFB1O75438 58 aa13.2□□□□□ -0.3
CCND3-223ENST00000616010 IMUPQ9GZP8 106 aa13.2□□□□□ -0.3
CCND3-223ENST00000616010 PRR15Q8IV56 129 aa13.19□□□□□ -0.3
CCND3-223ENST00000616010 PCLOQ9Y6V0 5065 aa13.17□□□□□ -0.3
CCND3-223ENST00000616010 A0A1B0GVX0 72 aa13.17□□□□□ -0.3
CCND3-223ENST00000616010 IGHV6-1A0A0B4J1U7 121 aa13.16□□□□□ -0.3
CCND3-223ENST00000616010 NOTCH2NLQ7Z3S9 236 aa13.06□□□□□ -0.32
CCND3-223ENST00000616010 C8orf17Q9NRJ1 99 aa13.06□□□□□ -0.32
CCND3-223ENST00000616010 HCG22E2RYF7 251 aa13.06□□□□□ -0.32
CCND3-223ENST00000616010 MMP24-AS1A0A0U1RRL7 71 aa13.05□□□□□ -0.32
CCND3-223ENST00000616010 WFDC13Q8IUB5 93 aa13.05□□□□□ -0.32
CCND3-223ENST00000616010 FAM236AA0A1B0GUQ0 79 aa13.04□□□□□ -0.32
CCND3-223ENST00000616010 FAM236BA0A1B0GV22 79 aa13.04□□□□□ -0.32
CCND3-223ENST00000616010 FP248Q71RG6 208 aaPredicted RBP13.04□□□□□ -0.32
CCND3-223ENST00000616010 C8orf87E5RJ46 101 aa13.01□□□□□ -0.33
CCND3-223ENST00000616010 LINC00313P59037 77 aa13□□□□□ -0.33
CCND3-223ENST00000616010 CASC2Q6XLA1 102 aa13□□□□□ -0.33
CCND3-223ENST00000616010 hDV103S1A0JD37 113 aa12.98□□□□□ -0.33
CCND3-223ENST00000616010 PRR4Q16378 134 aa12.98□□□□□ -0.33
CCND3-223ENST00000616010 IGLV7-46A0A075B6I9 117 aa12.97□□□□□ -0.33
CCND3-223ENST00000616010 C9orf92A6NGG3 77 aa12.96□□□□□ -0.34
CCND3-223ENST00000616010 SCGB1A1P11684 91 aa12.91□□□□□ -0.34
CCND3-223ENST00000616010 TMEM254Q8TBM7 123 aa12.91□□□□□ -0.34
CCND3-223ENST00000616010 MRPL34Q9BQ48 92 aaKnown RBP12.89□□□□□ -0.35
CCND3-223ENST00000616010 KRTAP16-1A8MUX0 517 aa12.89□□□□□ -0.35
CCND3-223ENST00000616010 KRTAP13-3Q3SY46 172 aa12.84□□□□□ -0.35
CCND3-223ENST00000616010 ATOX1O00244 68 aa12.83□□□□□ -0.36
CCND3-223ENST00000616010 NDUFS5O43920 106 aa12.82□□□□□ -0.36
CCND3-223ENST00000616010 TPRXLQ17RH7 258 aa12.78□□□□□ -0.36
CCND3-223ENST00000616010 HERC1Q15751 4861 aa12.78□□□□□ -0.36
CCND3-223ENST00000616010 Q8N9P0 234 aaPredicted RBP12.78□□□□□ -0.36
CCND3-223ENST00000616010 OCR1Q9BZK8 76 aa12.76□□□□□ -0.37
CCND3-223ENST00000616010 LPAP08519 4548 aa12.72□□□□□ -0.37
CCND3-223ENST00000616010 XP32Q5T750 250 aa12.72□□□□□ -0.37
CCND3-223ENST00000616010 SMIM20Q8N5G0 67 aa12.71□□□□□ -0.37
CCND3-223ENST00000616010 C20orf166-AS1Q96NR2 134 aa12.71□□□□□ -0.37
CCND3-223ENST00000616010 ANAPC13Q9BS18 74 aa12.71□□□□□ -0.37
CCND3-223ENST00000616010 A8MUU9 505 aa12.69□□□□□ -0.38
CCND3-223ENST00000616010 TP53AIP1Q9HCN2 124 aa12.69□□□□□ -0.38
CCND3-223ENST00000616010 TRAV7A0A075B6U4 112 aa12.68□□□□□ -0.38
CCND3-223ENST00000616010 SERP2Q8N6R1 65 aa12.66□□□□□ -0.38
CCND3-223ENST00000616010 UQCRQO14949 82 aa12.65□□□□□ -0.38
CCND3-223ENST00000616010 Q75L30 129 aa12.65□□□□□ -0.38
CCND3-223ENST00000616010 RPL37P61927 97 aaKnown RBP12.59□□□□□ -0.39
CCND3-223ENST00000616010 TRAV22A0A0B4J277 110 aa12.59□□□□□ -0.39
CCND3-223ENST00000616010 Q5W150 140 aa12.59□□□□□ -0.39
CCND3-223ENST00000616010 HMCN2Q8NDA2 5059 aa12.57□□□□□ -0.4
CCND3-223ENST00000616010 COX7CP15954 63 aa12.56□□□□□ -0.4
CCND3-223ENST00000616010 H0Y9P7 68 aa12.55□□□□□ -0.4
CCND3-223ENST00000616010 ZCCHC13Q8WW36 166 aaKnown RBP12.55□□□□□ -0.4
CCND3-223ENST00000616010 LRP2P98164 4655 aa12.55□□□□□ -0.4
CCND3-223ENST00000616010 C5orf47Q569G3 176 aa12.54□□□□□ -0.4
CCND3-223ENST00000616010 MP68P56378 58 aa12.5□□□□□ -0.41
CCND3-223ENST00000616010 ATP11AUNQ6ZP68 121 aa12.5□□□□□ -0.41
CCND3-223ENST00000616010 PCP4P48539 62 aa12.48□□□□□ -0.41
CCND3-223ENST00000616010 C20orf197Q8N268 126 aa12.47□□□□□ -0.41
CCND3-223ENST00000616010 LINC00208Q96KT6 92 aa12.45□□□□□ -0.42
CCND3-223ENST00000616010 CCDC179H3BU77 68 aa12.44□□□□□ -0.42
CCND3-223ENST00000616010 SNURFQ9Y675 71 aa12.42□□□□□ -0.42
CCND3-223ENST00000616010 PCOTHQ58A44 107 aa12.41□□□□□ -0.42
CCND3-223ENST00000616010 C1orf64Q8NEQ6 169 aa12.41□□□□□ -0.42
CCND3-223ENST00000616010 A0A0U1RQV1 116 aa12.4□□□□□ -0.42
CCND3-223ENST00000616010 H3BPC8 53 aa12.39□□□□□ -0.43
CCND3-223ENST00000616010 IGKV2D-30A0A075B6S6 120 aa12.36□□□□□ -0.43
CCND3-223ENST00000616010 LOC101927531A0A1B0GV80 90 aa12.36□□□□□ -0.43
CCND3-223ENST00000616010 IGKV2-30P06310 120 aa12.36□□□□□ -0.43
CCND3-223ENST00000616010 KLKP1Q107X0 134 aa12.35□□□□□ -0.43
CCND3-223ENST00000616010 SEC61BP60468 96 aaKnown RBP12.33□□□□□ -0.43
CCND3-223ENST00000616010 C7orf65Q6ZTY9 151 aa12.3□□□□□ -0.44
CCND3-223ENST00000616010 CYSTM1Q9H1C7 97 aa12.3□□□□□ -0.44
CCND3-223ENST00000616010 CYP4F30PQ9H0H9 118 aa12.3□□□□□ -0.44
CCND3-223ENST00000616010 SPINK7P58062 85 aa12.27□□□□□ -0.45
CCND3-223ENST00000616010 MUC17Q685J3 4493 aa12.26□□□□□ -0.45
CCND3-223ENST00000616010 H7BZZ5 65 aa12.16□□□□□ -0.46
CCND3-223ENST00000616010 NDUFC1O43677 76 aa12.16□□□□□ -0.46
CCND3-223ENST00000616010 KRTAP4-1Q9BYQ7 146 aa12.11□□□□□ -0.47
CCND3-223ENST00000616010 HRES1P13985 223 aa12.1□□□□□ -0.47
CCND3-223ENST00000616010 UBR4Q5T4S7 5183 aa12.07□□□□□ -0.48
CCND3-223ENST00000616010 C4orf26Q17RF5 130 aa12.04□□□□□ -0.48
CCND3-223ENST00000616010 SPANXA2-OT1Q8N9U9 137 aa11.99□□□□□ -0.49
CCND3-223ENST00000616010 MUC2Q02817 5179 aa11.99□□□□□ -0.49
CCND3-223ENST00000616010 TMEM258P61165 79 aa11.97□□□□□ -0.49
CCND3-223ENST00000616010 FAM236DA0A1B0GTK5 79 aa11.92□□□□□ -0.5
CCND3-223ENST00000616010 FAM236CP0DP71 79 aa11.92□□□□□ -0.5
CCND3-223ENST00000616010 MPLKIPQ8TAP9 179 aa11.92□□□□□ -0.5
CCND3-223ENST00000616010 COX6B2Q6YFQ2 88 aa11.9□□□□□ -0.5
CCND3-223ENST00000616010 RBM12B-AS1Q9P1G2 102 aa11.89□□□□□ -0.51
CCND3-223ENST00000616010 RNF213Q63HN8 5207 aa11.89□□□□□ -0.51
CCND3-223ENST00000616010 DMAC1Q96GE9 116 aa11.86□□□□□ -0.51
CCND3-223ENST00000616010 KRTAP3-1Q9BYR8 98 aa11.86□□□□□ -0.51
CCND3-223ENST00000616010 ATP5EP56381 51 aaPredicted RBP11.85□□□□□ -0.51
CCND3-223ENST00000616010 A8MUN3 132 aa11.8□□□□□ -0.52
CCND3-223ENST00000616010 ACYP2P14621 99 aa11.74□□□□□ -0.53
CCND3-223ENST00000616010 KRTAP19-2Q3LHN2 52 aa11.71□□□□□ -0.53
CCND3-223ENST00000616010 H1FX-AS1Q4G0G2 97 aa11.69□□□□□ -0.54
CCND3-223ENST00000616010 COA5Q86WW8 74 aa11.66□□□□□ -0.54
CCND3-223ENST00000616010 CHKB-CPT1BH3BT56 60 aa11.59□□□□□ -0.55
CCND3-223ENST00000616010 SERP1Q9Y6X1 66 aa11.59□□□□□ -0.55
CCND3-223ENST00000616010 S4R3F8 94 aa11.57□□□□□ -0.56
CCND3-223ENST00000616010 LCE2CQ5TA81 110 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms