RNA–Protein interactions for RNA: ENST00000614285.4

CACNA1A-214, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-214ENST00000614285 LAMA3Q16787 3333 aa9.88□□□□□ -0.83
CACNA1A-214ENST00000614285 BOD1L1Q8NFC6 3051 aa9.88□□□□□ -0.83
CACNA1A-214ENST00000614285 KRTAP1-3Q8IUG1 177 aa9.87□□□□□ -0.83
CACNA1A-214ENST00000614285 TNRC18O15417 2968 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-214ENST00000614285 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
CACNA1A-214ENST00000614285 KRTAP10-1P60331 282 aa9.84□□□□□ -0.83
CACNA1A-214ENST00000614285 CDH23Q9H251 3354 aa9.84□□□□□ -0.83
CACNA1A-214ENST00000614285 KRTAP29-1A8MX34 341 aaPredicted RBP9.83□□□□□ -0.84
CACNA1A-214ENST00000614285 COL6A3P12111 3177 aa9.82□□□□□ -0.84
CACNA1A-214ENST00000614285 A0A087X002 238 aa9.81□□□□□ -0.84
CACNA1A-214ENST00000614285 CFAP47Q6ZTR5 3102 aa9.8□□□□□ -0.84
CACNA1A-214ENST00000614285 LCE6AA0A183 80 aa9.79□□□□□ -0.84
CACNA1A-214ENST00000614285 KRTAP1-1Q07627 177 aa9.79□□□□□ -0.84
CACNA1A-214ENST00000614285 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.84
CACNA1A-214ENST00000614285 HIVEP1P15822 2718 aa9.77□□□□□ -0.84
CACNA1A-214ENST00000614285 KRTAP11-1Q8IUC1 163 aa9.77□□□□□ -0.85
CACNA1A-214ENST00000614285 VCANP13611 3396 aa9.76□□□□□ -0.85
CACNA1A-214ENST00000614285 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
CACNA1A-214ENST00000614285 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
CACNA1A-214ENST00000614285 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
CACNA1A-214ENST00000614285 CELSR2Q9HCU4 2923 aa9.74□□□□□ -0.85
CACNA1A-214ENST00000614285 TACC2O95359 2948 aa9.72□□□□□ -0.85
CACNA1A-214ENST00000614285 KRTAP1-5Q9BYS1 174 aa9.72□□□□□ -0.85
CACNA1A-214ENST00000614285 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
CACNA1A-214ENST00000614285 CELSR1Q9NYQ6 3014 aa9.69□□□□□ -0.86
CACNA1A-214ENST00000614285 PDZD2O15018 2839 aa9.68□□□□□ -0.86
CACNA1A-214ENST00000614285 USP34Q70CQ2 3546 aa9.67□□□□□ -0.86
CACNA1A-214ENST00000614285 TGP01266 2768 aa9.61□□□□□ -0.87
CACNA1A-214ENST00000614285 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
CACNA1A-214ENST00000614285 SRRM2Q9UQ35 2752 aaKnown RBP9.6□□□□□ -0.87
CACNA1A-214ENST00000614285 PRO2289Q9P1D8 64 aa9.57□□□□□ -0.88
CACNA1A-214ENST00000614285 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-214ENST00000614285 NBEAQ8NFP9 2946 aa9.45□□□□□ -0.9
CACNA1A-214ENST00000614285 ASPMQ8IZT6 3477 aa9.42□□□□□ -0.9
CACNA1A-214ENST00000614285 WDFY3Q8IZQ1 3526 aa9.4□□□□□ -0.9
CACNA1A-214ENST00000614285 DCHS2Q6V1P9 2916 aa9.4□□□□□ -0.9
CACNA1A-214ENST00000614285 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-214ENST00000614285 A0A1B0GVY2 172 aa9.38□□□□□ -0.91
CACNA1A-214ENST00000614285 LOC400499M0QZD8 3231 aa9.31□□□□□ -0.92
CACNA1A-214ENST00000614285 MYO15AQ9UKN7 3530 aa9.3□□□□□ -0.92
CACNA1A-214ENST00000614285 KRTAP10-10P60014 251 aa9.27□□□□□ -0.93
CACNA1A-214ENST00000614285 VWFP04275 2813 aa9.26□□□□□ -0.93
CACNA1A-214ENST00000614285 H0YAA0 97 aa9.24□□□□□ -0.93
CACNA1A-214ENST00000614285 KRTAP13-2Q52LG2 175 aa9.23□□□□□ -0.93
CACNA1A-214ENST00000614285 PKD1L1Q8TDX9 2849 aa9.2□□□□□ -0.94
CACNA1A-214ENST00000614285 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
CACNA1A-214ENST00000614285 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
CACNA1A-214ENST00000614285 LAMA5O15230 3695 aa9.17□□□□□ -0.94
CACNA1A-214ENST00000614285 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
CACNA1A-214ENST00000614285 EYSQ5T1H1 3165 aa9.13□□□□□ -0.95
CACNA1A-214ENST00000614285 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
CACNA1A-214ENST00000614285 FBN2P35556 2912 aa9.11□□□□□ -0.95
CACNA1A-214ENST00000614285 TENM4Q6N022 2769 aa9.09□□□□□ -0.95
CACNA1A-214ENST00000614285 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
CACNA1A-214ENST00000614285 COL7A1Q02388 2944 aa9.04□□□□□ -0.96
CACNA1A-214ENST00000614285 RELNP78509 3460 aa9.02□□□□□ -0.97
CACNA1A-214ENST00000614285 XP32Q5T750 250 aa8.99□□□□□ -0.97
CACNA1A-214ENST00000614285 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
CACNA1A-214ENST00000614285 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
CACNA1A-214ENST00000614285 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
CACNA1A-214ENST00000614285 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
CACNA1A-214ENST00000614285 SPENQ96T58 3664 aaKnown RBP8.85□□□□□ -0.99
CACNA1A-214ENST00000614285 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -0.99
CACNA1A-214ENST00000614285 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
CACNA1A-214ENST00000614285 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
CACNA1A-214ENST00000614285 KRTAP15-1Q3LI76 137 aa8.75□□□□□ -1.01
CACNA1A-214ENST00000614285 CSMD1Q96PZ7 3565 aa8.74□□□□□ -1.01
CACNA1A-214ENST00000614285 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
CACNA1A-214ENST00000614285 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
CACNA1A-214ENST00000614285 INE1O15225 51 aa8.64□□□□□ -1.03
CACNA1A-214ENST00000614285 DMDP11532 3685 aa8.62□□□□□ -1.03
CACNA1A-214ENST00000614285 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
CACNA1A-214ENST00000614285 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.04
CACNA1A-214ENST00000614285 KRTAP21-3Q3LHN1 58 aa8.57□□□□□ -1.04
CACNA1A-214ENST00000614285 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
CACNA1A-214ENST00000614285 CUBNO60494 3623 aa8.52□□□□□ -1.05
CACNA1A-214ENST00000614285 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.06
CACNA1A-214ENST00000614285 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
CACNA1A-214ENST00000614285 FBN3Q75N90 2809 aa8.3□□□□□ -1.08
CACNA1A-214ENST00000614285 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
CACNA1A-214ENST00000614285 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
CACNA1A-214ENST00000614285 CSMD2Q7Z408 3487 aa8.15□□□□□ -1.1
CACNA1A-214ENST00000614285 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
CACNA1A-214ENST00000614285 VPS13CQ709C8 3753 aa8.11□□□□□ -1.11
CACNA1A-214ENST00000614285 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
CACNA1A-214ENST00000614285 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
CACNA1A-214ENST00000614285 KRTAP10-12P60413 245 aa8□□□□□ -1.13
CACNA1A-214ENST00000614285 TRRAPQ9Y4A5 3859 aa7.96□□□□□ -1.14
CACNA1A-214ENST00000614285 AKAP9Q99996 3911 aa7.93□□□□□ -1.14
CACNA1A-214ENST00000614285 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
CACNA1A-214ENST00000614285 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
CACNA1A-214ENST00000614285 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
CACNA1A-214ENST00000614285 KRTAP3-1Q9BYR8 98 aa7.68□□□□□ -1.18
CACNA1A-214ENST00000614285 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
CACNA1A-214ENST00000614285 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
CACNA1A-214ENST00000614285 LYSTQ99698 3801 aa7.35□□□□□ -1.23
CACNA1A-214ENST00000614285 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
CACNA1A-214ENST00000614285 ALMS1Q8TCU4 4167 aa7.33□□□□□ -1.24
CACNA1A-214ENST00000614285 BSNQ9UPA5 3926 aa7.26□□□□□ -1.25
CACNA1A-214ENST00000614285 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms