RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 A0A0D9SG42 100 aa5.03□□□□□ -1.6
TMCO1-208ENST00000612311 A0A1B0GU33 70 aa5.02□□□□□ -1.61
TMCO1-208ENST00000612311 Q6ZSA8 131 aa5.02□□□□□ -1.61
TMCO1-208ENST00000612311 LCA10Q71F78 164 aa5.02□□□□□ -1.61
TMCO1-208ENST00000612311 NOTCH2NLQ7Z3S9 236 aa5.02□□□□□ -1.61
TMCO1-208ENST00000612311 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
TMCO1-208ENST00000612311 CELSR1Q9NYQ6 3014 aa5.01□□□□□ -1.61
TMCO1-208ENST00000612311 CRIPTQ9P021 101 aa5□□□□□ -1.61
TMCO1-208ENST00000612311 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
TMCO1-208ENST00000612311 LAMA5O15230 3695 aa4.99□□□□□ -1.61
TMCO1-208ENST00000612311 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
TMCO1-208ENST00000612311 ASPMQ8IZT6 3477 aa4.98□□□□□ -1.61
TMCO1-208ENST00000612311 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
TMCO1-208ENST00000612311 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
TMCO1-208ENST00000612311 Q5VSD8 79 aa4.97□□□□□ -1.61
TMCO1-208ENST00000612311 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.62
TMCO1-208ENST00000612311 ZFHX4Q86UP3 3567 aa4.93□□□□□ -1.62
TMCO1-208ENST00000612311 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
TMCO1-208ENST00000612311 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
TMCO1-208ENST00000612311 S4R3F8 94 aa4.91□□□□□ -1.62
TMCO1-208ENST00000612311 PDZD2O15018 2839 aa4.91□□□□□ -1.62
TMCO1-208ENST00000612311 DMDP11532 3685 aa4.89□□□□□ -1.63
TMCO1-208ENST00000612311 VWFP04275 2813 aa4.88□□□□□ -1.63
TMCO1-208ENST00000612311 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
TMCO1-208ENST00000612311 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
TMCO1-208ENST00000612311 PKD1L1Q8TDX9 2849 aa4.87□□□□□ -1.63
TMCO1-208ENST00000612311 OTOGQ6ZRI0 2925 aa4.87□□□□□ -1.63
TMCO1-208ENST00000612311 FBN1P35555 2871 aaKnown RBP4.86□□□□□ -1.63
TMCO1-208ENST00000612311 SEC61BP60468 96 aaKnown RBP4.85□□□□□ -1.63
TMCO1-208ENST00000612311 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
TMCO1-208ENST00000612311 KRTAP21-3Q3LHN1 58 aa4.83□□□□□ -1.64
TMCO1-208ENST00000612311 TGP01266 2768 aa4.83□□□□□ -1.64
TMCO1-208ENST00000612311 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
TMCO1-208ENST00000612311 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
TMCO1-208ENST00000612311 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
TMCO1-208ENST00000612311 CSMD1Q96PZ7 3565 aa4.8□□□□□ -1.64
TMCO1-208ENST00000612311 R4GN34 69 aa4.8□□□□□ -1.64
TMCO1-208ENST00000612311 SMG1Q96Q15 3661 aaKnown RBP4.79□□□□□ -1.64
TMCO1-208ENST00000612311 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
TMCO1-208ENST00000612311 M0R2T5 61 aa4.76□□□□□ -1.65
TMCO1-208ENST00000612311 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
TMCO1-208ENST00000612311 A8MU10 97 aa4.73□□□□□ -1.65
TMCO1-208ENST00000612311 A8MUU9 505 aa4.72□□□□□ -1.65
TMCO1-208ENST00000612311 M0QZ58 72 aa4.72□□□□□ -1.65
TMCO1-208ENST00000612311 ROMO1P60602 79 aa4.72□□□□□ -1.65
TMCO1-208ENST00000612311 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
TMCO1-208ENST00000612311 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
TMCO1-208ENST00000612311 A6NN06 94 aa4.7□□□□□ -1.66
TMCO1-208ENST00000612311 NBPF19A0A087WUL8 3843 aa4.69□□□□□ -1.66
TMCO1-208ENST00000612311 SVEP1Q4LDE5 3571 aa4.69□□□□□ -1.66
TMCO1-208ENST00000612311 ZFHX3Q15911 3703 aa4.67□□□□□ -1.66
TMCO1-208ENST00000612311 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
TMCO1-208ENST00000612311 CUBNO60494 3623 aa4.65□□□□□ -1.66
TMCO1-208ENST00000612311 CSMD2Q7Z408 3487 aa4.63□□□□□ -1.67
TMCO1-208ENST00000612311 KRTAP16-1A8MUX0 517 aa4.63□□□□□ -1.67
TMCO1-208ENST00000612311 SPENQ96T58 3664 aaKnown RBP4.6□□□□□ -1.67
TMCO1-208ENST00000612311 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.67
TMCO1-208ENST00000612311 FBN3Q75N90 2809 aa4.59□□□□□ -1.67
TMCO1-208ENST00000612311 XP32Q5T750 250 aa4.57□□□□□ -1.68
TMCO1-208ENST00000612311 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
TMCO1-208ENST00000612311 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
TMCO1-208ENST00000612311 ANK3Q12955 4377 aaKnown RBP4.52□□□□□ -1.69
TMCO1-208ENST00000612311 TRRAPQ9Y4A5 3859 aa4.51□□□□□ -1.69
TMCO1-208ENST00000612311 BSNQ9UPA5 3926 aa4.51□□□□□ -1.69
TMCO1-208ENST00000612311 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
TMCO1-208ENST00000612311 H3BS24 57 aa4.5□□□□□ -1.69
TMCO1-208ENST00000612311 A0A1B0GVY2 172 aa4.48□□□□□ -1.69
TMCO1-208ENST00000612311 MEGF8Q7Z7M0 2845 aa4.48□□□□□ -1.69
TMCO1-208ENST00000612311 H0YAA0 97 aa4.47□□□□□ -1.69
TMCO1-208ENST00000612311 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
TMCO1-208ENST00000612311 KRTAP10-8P60410 259 aa4.46□□□□□ -1.7
TMCO1-208ENST00000612311 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
TMCO1-208ENST00000612311 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
TMCO1-208ENST00000612311 P0C880 135 aa4.38□□□□□ -1.71
TMCO1-208ENST00000612311 TNP1P09430 55 aa4.35□□□□□ -1.71
TMCO1-208ENST00000612311 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
TMCO1-208ENST00000612311 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
TMCO1-208ENST00000612311 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
TMCO1-208ENST00000612311 VPS13CQ709C8 3753 aa4.28□□□□□ -1.72
TMCO1-208ENST00000612311 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
TMCO1-208ENST00000612311 ZNF469Q96JG9 3925 aaPredicted RBP4.21□□□□□ -1.74
TMCO1-208ENST00000612311 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
TMCO1-208ENST00000612311 HUWE1Q7Z6Z7 4374 aaKnown RBP4.19□□□□□ -1.74
TMCO1-208ENST00000612311 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
TMCO1-208ENST00000612311 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
TMCO1-208ENST00000612311 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
TMCO1-208ENST00000612311 KRTAP12-1P59990 96 aa4.15□□□□□ -1.74
TMCO1-208ENST00000612311 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.75
TMCO1-208ENST00000612311 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
TMCO1-208ENST00000612311 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
TMCO1-208ENST00000612311 CSMD3Q7Z407 3707 aa4.07□□□□□ -1.76
TMCO1-208ENST00000612311 KRTAP3-3Q9BYR6 98 aa4.05□□□□□ -1.76
TMCO1-208ENST00000612311 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
TMCO1-208ENST00000612311 AKAP9Q99996 3911 aa4.04□□□□□ -1.76
TMCO1-208ENST00000612311 DNAH9Q9NYC9 4486 aa4.04□□□□□ -1.76
TMCO1-208ENST00000612311 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
TMCO1-208ENST00000612311 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
TMCO1-208ENST00000612311 DNHD1Q96M86 4753 aa3.98□□□□□ -1.77
TMCO1-208ENST00000612311 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.77
TMCO1-208ENST00000612311 PLECQ15149 4684 aaKnown RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms