RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 FAT3Q8TDW7 4589 aa12.95□□□□□ -0.34
UBE3C-209ENST00000611269 KRTAP29-1A8MX34 341 aaPredicted RBP12.94□□□□□ -0.34
UBE3C-209ENST00000611269 TYMSOSQ8TAI1 123 aa12.94□□□□□ -0.34
UBE3C-209ENST00000611269 NDUFB1O75438 58 aa12.93□□□□□ -0.34
UBE3C-209ENST00000611269 TMEM258P61165 79 aa12.92□□□□□ -0.34
UBE3C-209ENST00000611269 WFDC13Q8IUB5 93 aa12.91□□□□□ -0.34
UBE3C-209ENST00000611269 TMEM254Q8TBM7 123 aa12.91□□□□□ -0.34
UBE3C-209ENST00000611269 CASC2Q6XLA1 102 aa12.89□□□□□ -0.35
UBE3C-209ENST00000611269 SNURFQ9Y675 71 aa12.89□□□□□ -0.35
UBE3C-209ENST00000611269 TNXBP22105 4242 aa12.86□□□□□ -0.35
UBE3C-209ENST00000611269 A0A0U1RQV1 116 aa12.86□□□□□ -0.35
UBE3C-209ENST00000611269 H7BZZ5 65 aa12.85□□□□□ -0.35
UBE3C-209ENST00000611269 KRTAP10-8P60410 259 aa12.85□□□□□ -0.35
UBE3C-209ENST00000611269 MMP24-AS1A0A0U1RRL7 71 aa12.85□□□□□ -0.35
UBE3C-209ENST00000611269 NDUFC1O43677 76 aa12.85□□□□□ -0.35
UBE3C-209ENST00000611269 OXTP01178 125 aa12.85□□□□□ -0.35
UBE3C-209ENST00000611269 ASB16-AS1Q495Z4 193 aa12.84□□□□□ -0.35
UBE3C-209ENST00000611269 C5orf47Q569G3 176 aa12.82□□□□□ -0.36
UBE3C-209ENST00000611269 MT1HL1P0DM35 61 aa12.81□□□□□ -0.36
UBE3C-209ENST00000611269 A0A1B0GVX0 72 aa12.8□□□□□ -0.36
UBE3C-209ENST00000611269 LINC00304Q8N9R0 145 aa12.79□□□□□ -0.36
UBE3C-209ENST00000611269 Q5XG85 94 aa12.78□□□□□ -0.36
UBE3C-209ENST00000611269 hDV103S1A0JD37 113 aa12.78□□□□□ -0.36
UBE3C-209ENST00000611269 C8orf17Q9NRJ1 99 aa12.78□□□□□ -0.36
UBE3C-209ENST00000611269 IGHV6-1A0A0B4J1U7 121 aa12.74□□□□□ -0.37
UBE3C-209ENST00000611269 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
UBE3C-209ENST00000611269 PCLOQ9Y6V0 5065 aa12.73□□□□□ -0.37
UBE3C-209ENST00000611269 ZCCHC13Q8WW36 166 aaKnown RBP12.72□□□□□ -0.37
UBE3C-209ENST00000611269 FAM236DA0A1B0GTK5 79 aa12.7□□□□□ -0.38
UBE3C-209ENST00000611269 FAM236CP0DP71 79 aa12.7□□□□□ -0.38
UBE3C-209ENST00000611269 RPS28P62857 69 aaKnown RBP12.7□□□□□ -0.38
UBE3C-209ENST00000611269 SPAG11AQ6PDA7 123 aa12.7□□□□□ -0.38
UBE3C-209ENST00000611269 SPINK1P00995 79 aa12.69□□□□□ -0.38
UBE3C-209ENST00000611269 MP68P56378 58 aa12.68□□□□□ -0.38
UBE3C-209ENST00000611269 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
UBE3C-209ENST00000611269 J3QL48 77 aa12.66□□□□□ -0.38
UBE3C-209ENST00000611269 LIMD2Q9BT23 127 aa12.65□□□□□ -0.38
UBE3C-209ENST00000611269 TP53AIP1Q9HCN2 124 aa12.65□□□□□ -0.38
UBE3C-209ENST00000611269 C1orf195Q5TG92 126 aa12.64□□□□□ -0.39
UBE3C-209ENST00000611269 NOTCH2NLQ7Z3S9 236 aa12.64□□□□□ -0.39
UBE3C-209ENST00000611269 H3BPC8 53 aa12.63□□□□□ -0.39
UBE3C-209ENST00000611269 MRPL34Q9BQ48 92 aaKnown RBP12.63□□□□□ -0.39
UBE3C-209ENST00000611269 ATP5EP56381 51 aaPredicted RBP12.62□□□□□ -0.39
UBE3C-209ENST00000611269 H0Y9P7 68 aa12.61□□□□□ -0.39
UBE3C-209ENST00000611269 RPS29P62273 56 aaKnown RBP12.61□□□□□ -0.39
UBE3C-209ENST00000611269 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
UBE3C-209ENST00000611269 LINC00208Q96KT6 92 aa12.58□□□□□ -0.4
UBE3C-209ENST00000611269 TRAV22A0A0B4J277 110 aa12.57□□□□□ -0.4
UBE3C-209ENST00000611269 NDUFS5O43920 106 aa12.53□□□□□ -0.4
UBE3C-209ENST00000611269 SERP1Q9Y6X1 66 aa12.53□□□□□ -0.4
UBE3C-209ENST00000611269 LINC00313P59037 77 aa12.51□□□□□ -0.41
UBE3C-209ENST00000611269 C1orf64Q8NEQ6 169 aa12.51□□□□□ -0.41
UBE3C-209ENST00000611269 RETNLBQ9BQ08 111 aa12.49□□□□□ -0.41
UBE3C-209ENST00000611269 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
UBE3C-209ENST00000611269 KRTAP16-1A8MUX0 517 aa12.38□□□□□ -0.43
UBE3C-209ENST00000611269 SPANXA2-OT1Q8N9U9 137 aa12.38□□□□□ -0.43
UBE3C-209ENST00000611269 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
UBE3C-209ENST00000611269 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
UBE3C-209ENST00000611269 Q5W150 140 aa12.36□□□□□ -0.43
UBE3C-209ENST00000611269 HERC1Q15751 4861 aa12.32□□□□□ -0.44
UBE3C-209ENST00000611269 PRR4Q16378 134 aa12.31□□□□□ -0.44
UBE3C-209ENST00000611269 FP248Q71RG6 208 aaPredicted RBP12.3□□□□□ -0.44
UBE3C-209ENST00000611269 LOC101927531A0A1B0GV80 90 aa12.29□□□□□ -0.44
UBE3C-209ENST00000611269 IGLV7-46A0A075B6I9 117 aa12.26□□□□□ -0.45
UBE3C-209ENST00000611269 SMIM26A0A096LP01 95 aa12.26□□□□□ -0.45
UBE3C-209ENST00000611269 PCOTHQ58A44 107 aa12.24□□□□□ -0.45
UBE3C-209ENST00000611269 C9orf92A6NGG3 77 aa12.16□□□□□ -0.46
UBE3C-209ENST00000611269 IGKV2-30P06310 120 aa12.12□□□□□ -0.47
UBE3C-209ENST00000611269 TPRXLQ17RH7 258 aa12.1□□□□□ -0.47
UBE3C-209ENST00000611269 LPAP08519 4548 aa12.09□□□□□ -0.47
UBE3C-209ENST00000611269 HMCN2Q8NDA2 5059 aa12.06□□□□□ -0.48
UBE3C-209ENST00000611269 C4orf26Q17RF5 130 aa12.04□□□□□ -0.48
UBE3C-209ENST00000611269 C20orf166-AS1Q96NR2 134 aa12.04□□□□□ -0.48
UBE3C-209ENST00000611269 A8MUU9 505 aa12.03□□□□□ -0.48
UBE3C-209ENST00000611269 HRES1P13985 223 aa12.01□□□□□ -0.49
UBE3C-209ENST00000611269 COA5Q86WW8 74 aa12□□□□□ -0.49
UBE3C-209ENST00000611269 XP32Q5T750 250 aa11.99□□□□□ -0.49
UBE3C-209ENST00000611269 MPLKIPQ8TAP9 179 aa11.95□□□□□ -0.5
UBE3C-209ENST00000611269 IGKV2D-30A0A075B6S6 120 aa11.95□□□□□ -0.5
UBE3C-209ENST00000611269 Q1T7F1 81 aa11.95□□□□□ -0.5
UBE3C-209ENST00000611269 LRP2P98164 4655 aa11.94□□□□□ -0.5
UBE3C-209ENST00000611269 DMAC1Q96GE9 116 aa11.9□□□□□ -0.5
UBE3C-209ENST00000611269 ACYP2P14621 99 aa11.89□□□□□ -0.51
UBE3C-209ENST00000611269 C7orf65Q6ZTY9 151 aa11.88□□□□□ -0.51
UBE3C-209ENST00000611269 Q75L30 129 aa11.87□□□□□ -0.51
UBE3C-209ENST00000611269 V9GYY9 64 aa11.85□□□□□ -0.51
UBE3C-209ENST00000611269 RPL37P61927 97 aaKnown RBP11.84□□□□□ -0.51
UBE3C-209ENST00000611269 ATP11AUNQ6ZP68 121 aa11.73□□□□□ -0.53
UBE3C-209ENST00000611269 SPINK7P58062 85 aa11.69□□□□□ -0.54
UBE3C-209ENST00000611269 SEC61BP60468 96 aaKnown RBP11.69□□□□□ -0.54
UBE3C-209ENST00000611269 CHKB-CPT1BH3BT56 60 aa11.68□□□□□ -0.54
UBE3C-209ENST00000611269 A8MUN3 132 aa11.67□□□□□ -0.54
UBE3C-209ENST00000611269 PSPHP1O15172 72 aa11.67□□□□□ -0.54
UBE3C-209ENST00000611269 LINC01558Q9Y6Z2 57 aa11.66□□□□□ -0.54
UBE3C-209ENST00000611269 MUC17Q685J3 4493 aa11.63□□□□□ -0.55
UBE3C-209ENST00000611269 PRR15LQ9BU68 103 aa11.59□□□□□ -0.55
UBE3C-209ENST00000611269 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
UBE3C-209ENST00000611269 Q5VV11 94 aa11.59□□□□□ -0.55
UBE3C-209ENST00000611269 KRTAP3-1Q9BYR8 98 aa11.51□□□□□ -0.57
UBE3C-209ENST00000611269 KRTAP4-1Q9BYQ7 146 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms