RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
EWSR1-221ENST00000610553 NDUFS5O43920 106 aa10.16□□□□□ -0.78
EWSR1-221ENST00000610553 Q75L30 129 aa10.16□□□□□ -0.78
EWSR1-221ENST00000610553 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.78
EWSR1-221ENST00000610553 CDK2AP2O75956 126 aa10.15□□□□□ -0.79
EWSR1-221ENST00000610553 PMAIP1Q13794 54 aa10.15□□□□□ -0.79
EWSR1-221ENST00000610553 A0A087X002 238 aa10.14□□□□□ -0.79
EWSR1-221ENST00000610553 NOTCH2NLQ7Z3S9 236 aa10.14□□□□□ -0.79
EWSR1-221ENST00000610553 ZNF861PO60384 105 aa10.13□□□□□ -0.79
EWSR1-221ENST00000610553 RTL8CO15255 209 aa10.13□□□□□ -0.79
EWSR1-221ENST00000610553 PLAC8Q9NZF1 115 aa10.12□□□□□ -0.79
EWSR1-221ENST00000610553 DNAH2Q9P225 4427 aa10.12□□□□□ -0.79
EWSR1-221ENST00000610553 DNAH17Q9UFH2 4485 aa10.12□□□□□ -0.79
EWSR1-221ENST00000610553 HRES1P13985 223 aa10.07□□□□□ -0.8
EWSR1-221ENST00000610553 LINC01558Q9Y6Z2 57 aa10.07□□□□□ -0.8
EWSR1-221ENST00000610553 LCA10Q71F78 164 aa10.07□□□□□ -0.8
EWSR1-221ENST00000610553 A6NED7 52 aa10.05□□□□□ -0.8
EWSR1-221ENST00000610553 SPAG11AQ6PDA7 123 aa10.05□□□□□ -0.8
EWSR1-221ENST00000610553 KRTAP13-3Q3SY46 172 aa10.04□□□□□ -0.8
EWSR1-221ENST00000610553 SEC61GP60059 68 aa10.02□□□□□ -0.81
EWSR1-221ENST00000610553 Q5W150 140 aa10.01□□□□□ -0.81
EWSR1-221ENST00000610553 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
EWSR1-221ENST00000610553 IGLV7-43P04211 117 aa9.99□□□□□ -0.81
EWSR1-221ENST00000610553 ATP11AUNQ6ZP68 121 aa9.99□□□□□ -0.81
EWSR1-221ENST00000610553 CDC42SE1Q9NRR8 79 aa9.99□□□□□ -0.81
EWSR1-221ENST00000610553 ALMS1Q8TCU4 4167 aa9.98□□□□□ -0.81
EWSR1-221ENST00000610553 SPTSSBQ8NFR3 76 aa9.96□□□□□ -0.81
EWSR1-221ENST00000610553 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.82
EWSR1-221ENST00000610553 KRTAP21-3Q3LHN1 58 aa9.94□□□□□ -0.82
EWSR1-221ENST00000610553 C8orf87E5RJ46 101 aa9.92□□□□□ -0.82
EWSR1-221ENST00000610553 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
EWSR1-221ENST00000610553 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.82
EWSR1-221ENST00000610553 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.82
EWSR1-221ENST00000610553 HYDINQ4G0P3 5121 aa9.9□□□□□ -0.82
EWSR1-221ENST00000610553 DNAH6Q9C0G6 4158 aa9.89□□□□□ -0.83
EWSR1-221ENST00000610553 A6NN06 94 aa9.89□□□□□ -0.83
EWSR1-221ENST00000610553 SPINK7P58062 85 aa9.89□□□□□ -0.83
EWSR1-221ENST00000610553 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
EWSR1-221ENST00000610553 C1orf134Q5TEV5 83 aa9.88□□□□□ -0.83
EWSR1-221ENST00000610553 ACYP2P14621 99 aa9.86□□□□□ -0.83
EWSR1-221ENST00000610553 DNAH5Q8TE73 4624 aa9.85□□□□□ -0.83
EWSR1-221ENST00000610553 LY6G6CO95867 125 aa9.85□□□□□ -0.83
EWSR1-221ENST00000610553 DMAC1Q96GE9 116 aa9.84□□□□□ -0.83
EWSR1-221ENST00000610553 LINC00313P59037 77 aa9.83□□□□□ -0.84
EWSR1-221ENST00000610553 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
EWSR1-221ENST00000610553 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
EWSR1-221ENST00000610553 IGKV2-30P06310 120 aa9.77□□□□□ -0.85
EWSR1-221ENST00000610553 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.85
EWSR1-221ENST00000610553 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
EWSR1-221ENST00000610553 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
EWSR1-221ENST00000610553 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
EWSR1-221ENST00000610553 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
EWSR1-221ENST00000610553 LRP1BQ9NZR2 4599 aa9.72□□□□□ -0.85
EWSR1-221ENST00000610553 C7orf65Q6ZTY9 151 aa9.71□□□□□ -0.86
EWSR1-221ENST00000610553 PKD1P98161 4303 aa9.7□□□□□ -0.86
EWSR1-221ENST00000610553 Q6ZSA8 131 aa9.68□□□□□ -0.86
EWSR1-221ENST00000610553 RBM12B-AS1Q9P1G2 102 aa9.68□□□□□ -0.86
EWSR1-221ENST00000610553 KRTAP1-4P0C5Y4 121 aa9.66□□□□□ -0.86
EWSR1-221ENST00000610553 PKHD1P08F94 4074 aa9.65□□□□□ -0.86
EWSR1-221ENST00000610553 A0A1B0GU69 56 aa9.65□□□□□ -0.87
EWSR1-221ENST00000610553 VPS13BQ7Z7G8 4022 aa9.63□□□□□ -0.87
EWSR1-221ENST00000610553 KRTAP10-1P60331 282 aa9.62□□□□□ -0.87
EWSR1-221ENST00000610553 IGKV2D-30A0A075B6S6 120 aa9.6□□□□□ -0.87
EWSR1-221ENST00000610553 SPATA8Q6RVD6 105 aa9.56□□□□□ -0.88
EWSR1-221ENST00000610553 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
EWSR1-221ENST00000610553 UQCR11O14957 56 aa9.5□□□□□ -0.89
EWSR1-221ENST00000610553 SPINK1P00995 79 aa9.5□□□□□ -0.89
EWSR1-221ENST00000610553 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
EWSR1-221ENST00000610553 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
EWSR1-221ENST00000610553 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
EWSR1-221ENST00000610553 MIR22HGQ0VDD5 57 aa9.49□□□□□ -0.89
EWSR1-221ENST00000610553 RYR2Q92736 4967 aa9.44□□□□□ -0.9
EWSR1-221ENST00000610553 PRAC1Q96KF2 57 aa9.42□□□□□ -0.9
EWSR1-221ENST00000610553 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.91
EWSR1-221ENST00000610553 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
EWSR1-221ENST00000610553 RPS29P62273 56 aaKnown RBP9.39□□□□□ -0.91
EWSR1-221ENST00000610553 Q8N1X5 172 aa9.38□□□□□ -0.91
EWSR1-221ENST00000610553 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
EWSR1-221ENST00000610553 FAT1Q14517 4588 aa9.31□□□□□ -0.92
EWSR1-221ENST00000610553 APOBP04114 4563 aaKnown RBP9.3□□□□□ -0.92
EWSR1-221ENST00000610553 RYR3Q15413 4870 aa9.28□□□□□ -0.92
EWSR1-221ENST00000610553 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
EWSR1-221ENST00000610553 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
EWSR1-221ENST00000610553 A8MUU9 505 aa9.25□□□□□ -0.93
EWSR1-221ENST00000610553 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
EWSR1-221ENST00000610553 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
EWSR1-221ENST00000610553 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
EWSR1-221ENST00000610553 H0YAA0 97 aa9.19□□□□□ -0.94
EWSR1-221ENST00000610553 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
EWSR1-221ENST00000610553 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
EWSR1-221ENST00000610553 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
EWSR1-221ENST00000610553 KRTAP10-4P60372 401 aaPredicted RBP9.11□□□□□ -0.95
EWSR1-221ENST00000610553 A0A1B0GU33 70 aa9.08□□□□□ -0.96
EWSR1-221ENST00000610553 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
EWSR1-221ENST00000610553 HSPG2P98160 4391 aa9.03□□□□□ -0.96
EWSR1-221ENST00000610553 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
EWSR1-221ENST00000610553 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.97
EWSR1-221ENST00000610553 FLG2Q5D862 2391 aaPredicted RBP8.96□□□□□ -0.97
EWSR1-221ENST00000610553 EPPK1P58107 5090 aaKnown RBP8.94□□□□□ -0.98
EWSR1-221ENST00000610553 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms