RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 USH2AO75445 5202 aa10.04□□□□□ -0.8
SGMS1-208ENST00000608287 A8MUU9 505 aa10.02□□□□□ -0.81
SGMS1-208ENST00000608287 LINC00313P59037 77 aa10.02□□□□□ -0.81
SGMS1-208ENST00000608287 JMJD7-PLA2G4BH0Y9G9 81 aa10.01□□□□□ -0.81
SGMS1-208ENST00000608287 TRBV20-1A0A075B6N2 111 aa10□□□□□ -0.81
SGMS1-208ENST00000608287 C21orf62-AS1Q17RA5 79 aa9.98□□□□□ -0.81
SGMS1-208ENST00000608287 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
SGMS1-208ENST00000608287 C9orf118A6NHY6 69 aa9.96□□□□□ -0.82
SGMS1-208ENST00000608287 Q6ZQT0 140 aa9.96□□□□□ -0.82
SGMS1-208ENST00000608287 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
SGMS1-208ENST00000608287 FCGBPQ9Y6R7 5405 aaPredicted RBP9.94□□□□□ -0.82
SGMS1-208ENST00000608287 LOC110117498A0A087WWA1 95 aa9.94□□□□□ -0.82
SGMS1-208ENST00000608287 TAX1BP3O14907 124 aa9.94□□□□□ -0.82
SGMS1-208ENST00000608287 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
SGMS1-208ENST00000608287 PDE6GP18545 87 aa9.93□□□□□ -0.82
SGMS1-208ENST00000608287 C14orf132Q9NPU4 83 aa9.93□□□□□ -0.82
SGMS1-208ENST00000608287 A0A1B0GVX0 72 aa9.91□□□□□ -0.82
SGMS1-208ENST00000608287 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
SGMS1-208ENST00000608287 J3KT08 172 aa9.91□□□□□ -0.82
SGMS1-208ENST00000608287 A0A1B0GW54 56 aa9.89□□□□□ -0.83
SGMS1-208ENST00000608287 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
SGMS1-208ENST00000608287 LINC00846Q9NV44 126 aa9.88□□□□□ -0.83
SGMS1-208ENST00000608287 SYNE2Q8WXH0 6885 aaKnown RBP9.87□□□□□ -0.83
SGMS1-208ENST00000608287 MTURNQ8N3F0 131 aa9.87□□□□□ -0.83
SGMS1-208ENST00000608287 H3BT86 120 aa9.86□□□□□ -0.83
SGMS1-208ENST00000608287 KRTAP9-8Q9BYQ0 159 aa9.86□□□□□ -0.83
SGMS1-208ENST00000608287 KRTAP19-1Q8IUB9 90 aa9.85□□□□□ -0.83
SGMS1-208ENST00000608287 NDUFB1O75438 58 aa9.84□□□□□ -0.83
SGMS1-208ENST00000608287 MACF1Q9UPN3 7388 aaKnown RBP9.82□□□□□ -0.84
SGMS1-208ENST00000608287 NREPQ16612 68 aa9.8□□□□□ -0.84
SGMS1-208ENST00000608287 SPCS1Q9Y6A9 102 aa9.8□□□□□ -0.84
SGMS1-208ENST00000608287 A8MWP4 228 aa9.79□□□□□ -0.84
SGMS1-208ENST00000608287 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
SGMS1-208ENST00000608287 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
SGMS1-208ENST00000608287 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
SGMS1-208ENST00000608287 PRR15Q8IV56 129 aa9.7□□□□□ -0.86
SGMS1-208ENST00000608287 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
SGMS1-208ENST00000608287 ZCCHC13Q8WW36 166 aaKnown RBP9.7□□□□□ -0.86
SGMS1-208ENST00000608287 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
SGMS1-208ENST00000608287 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
SGMS1-208ENST00000608287 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
SGMS1-208ENST00000608287 Q6ZVQ6 151 aa9.67□□□□□ -0.86
SGMS1-208ENST00000608287 LCE2BO14633 110 aa9.66□□□□□ -0.86
SGMS1-208ENST00000608287 MT2AP02795 61 aa9.65□□□□□ -0.86
SGMS1-208ENST00000608287 HRES1P13985 223 aa9.65□□□□□ -0.86
SGMS1-208ENST00000608287 RBM12B-AS1Q9P1G2 102 aa9.65□□□□□ -0.86
SGMS1-208ENST00000608287 K7EP34 96 aa9.64□□□□□ -0.87
SGMS1-208ENST00000608287 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
SGMS1-208ENST00000608287 K7EQZ3 153 aa9.63□□□□□ -0.87
SGMS1-208ENST00000608287 BPY2O14599 106 aa9.63□□□□□ -0.87
SGMS1-208ENST00000608287 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
SGMS1-208ENST00000608287 MPLKIPQ8TAP9 179 aa9.61□□□□□ -0.87
SGMS1-208ENST00000608287 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
SGMS1-208ENST00000608287 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
SGMS1-208ENST00000608287 SPINK7P58062 85 aa9.59□□□□□ -0.87
SGMS1-208ENST00000608287 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
SGMS1-208ENST00000608287 KRTAP6-3Q3LI67 103 aa9.59□□□□□ -0.87
SGMS1-208ENST00000608287 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
SGMS1-208ENST00000608287 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
SGMS1-208ENST00000608287 hDV103S1A0JD37 113 aa9.57□□□□□ -0.88
SGMS1-208ENST00000608287 MT1FP04733 61 aa9.56□□□□□ -0.88
SGMS1-208ENST00000608287 GTF2H5Q6ZYL4 71 aa9.55□□□□□ -0.88
SGMS1-208ENST00000608287 NDUFS5O43920 106 aa9.54□□□□□ -0.88
SGMS1-208ENST00000608287 KRTAP19-6Q3LI70 58 aa9.54□□□□□ -0.88
SGMS1-208ENST00000608287 Q8N9L7 120 aa9.52□□□□□ -0.89
SGMS1-208ENST00000608287 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
SGMS1-208ENST00000608287 WFDC13Q8IUB5 93 aa9.48□□□□□ -0.89
SGMS1-208ENST00000608287 F8W1H4 67 aa9.47□□□□□ -0.89
SGMS1-208ENST00000608287 CASC2Q6XLA1 102 aa9.46□□□□□ -0.9
SGMS1-208ENST00000608287 ETDBQ3ZM63 59 aa9.42□□□□□ -0.9
SGMS1-208ENST00000608287 HCG22E2RYF7 251 aa9.4□□□□□ -0.9
SGMS1-208ENST00000608287 Q5W150 140 aa9.38□□□□□ -0.91
SGMS1-208ENST00000608287 IGKV2D-30A0A075B6S6 120 aa9.36□□□□□ -0.91
SGMS1-208ENST00000608287 IGKV2-30P06310 120 aa9.36□□□□□ -0.91
SGMS1-208ENST00000608287 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
SGMS1-208ENST00000608287 NEBP20929 6669 aa9.33□□□□□ -0.92
SGMS1-208ENST00000608287 CXCL6P80162 114 aa9.32□□□□□ -0.92
SGMS1-208ENST00000608287 KRTAP20-1Q3LI63 56 aa9.24□□□□□ -0.93
SGMS1-208ENST00000608287 H1FX-AS1Q4G0G2 97 aa9.24□□□□□ -0.93
SGMS1-208ENST00000608287 ACYP1P07311 99 aa9.2□□□□□ -0.94
SGMS1-208ENST00000608287 C4orf26Q17RF5 130 aa9.18□□□□□ -0.94
SGMS1-208ENST00000608287 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
SGMS1-208ENST00000608287 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
SGMS1-208ENST00000608287 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
SGMS1-208ENST00000608287 A0A1B0GV90 55 aa9.08□□□□□ -0.96
SGMS1-208ENST00000608287 MUC12Q9UKN1 5478 aa9.08□□□□□ -0.96
SGMS1-208ENST00000608287 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
SGMS1-208ENST00000608287 C1orf64Q8NEQ6 169 aa9.02□□□□□ -0.97
SGMS1-208ENST00000608287 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
SGMS1-208ENST00000608287 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
SGMS1-208ENST00000608287 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
SGMS1-208ENST00000608287 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
SGMS1-208ENST00000608287 C5orf47Q569G3 176 aa8.96□□□□□ -0.98
SGMS1-208ENST00000608287 S4R3F8 94 aa8.96□□□□□ -0.98
SGMS1-208ENST00000608287 A0A087WVE0 104 aa8.94□□□□□ -0.98
SGMS1-208ENST00000608287 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
SGMS1-208ENST00000608287 UQCRQO14949 82 aa8.92□□□□□ -0.98
SGMS1-208ENST00000608287 A6NN06 94 aa8.9□□□□□ -0.98
SGMS1-208ENST00000608287 H0Y9P7 68 aa8.89□□□□□ -0.99
SGMS1-208ENST00000608287 LCA10Q71F78 164 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms