RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
SRGAP2-211ENST00000604423 ACANP16112 2415 aa3.91□□□□□ -1.78
SRGAP2-211ENST00000604423 TEP1Q99973 2627 aaKnown RBP3.91□□□□□ -1.78
SRGAP2-211ENST00000604423 ACYP2P14621 99 aa3.91□□□□□ -1.78
SRGAP2-211ENST00000604423 KRTAP21-3Q3LHN1 58 aa3.91□□□□□ -1.78
SRGAP2-211ENST00000604423 IGKV2-30P06310 120 aa3.9□□□□□ -1.78
SRGAP2-211ENST00000604423 PRR26Q8N8Z3 221 aa3.9□□□□□ -1.78
SRGAP2-211ENST00000604423 A0A1B0GU69 56 aa3.9□□□□□ -1.79
SRGAP2-211ENST00000604423 Q96NJ1 140 aa3.9□□□□□ -1.79
SRGAP2-211ENST00000604423 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
SRGAP2-211ENST00000604423 C14orf177Q52M58 125 aa3.88□□□□□ -1.79
SRGAP2-211ENST00000604423 NOTCH2Q04721 2471 aa3.88□□□□□ -1.79
SRGAP2-211ENST00000604423 VWFP04275 2813 aa3.88□□□□□ -1.79
SRGAP2-211ENST00000604423 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
SRGAP2-211ENST00000604423 INAFM1C9JVW0 142 aa3.87□□□□□ -1.79
SRGAP2-211ENST00000604423 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
SRGAP2-211ENST00000604423 A0A087X002 238 aa3.85□□□□□ -1.79
SRGAP2-211ENST00000604423 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
SRGAP2-211ENST00000604423 ZNF706Q9Y5V0 76 aaPredicted RBP3.85□□□□□ -1.79
SRGAP2-211ENST00000604423 UQCR11O14957 56 aa3.85□□□□□ -1.79
SRGAP2-211ENST00000604423 TENM2Q9NT68 2774 aa3.84□□□□□ -1.79
SRGAP2-211ENST00000604423 RTL8CO15255 209 aa3.84□□□□□ -1.79
SRGAP2-211ENST00000604423 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
SRGAP2-211ENST00000604423 DMAC1Q96GE9 116 aa3.84□□□□□ -1.79
SRGAP2-211ENST00000604423 UBE2DNLQ8IWF7 75 aa3.83□□□□□ -1.8
SRGAP2-211ENST00000604423 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
SRGAP2-211ENST00000604423 PKD1L1Q8TDX9 2849 aa3.83□□□□□ -1.8
SRGAP2-211ENST00000604423 K7EIL1 84 aa3.83□□□□□ -1.8
SRGAP2-211ENST00000604423 SPINK6Q6UWN8 80 aa3.83□□□□□ -1.8
SRGAP2-211ENST00000604423 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
SRGAP2-211ENST00000604423 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
SRGAP2-211ENST00000604423 DNAH1Q9P2D7 4330 aa3.82□□□□□ -1.8
SRGAP2-211ENST00000604423 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
SRGAP2-211ENST00000604423 Q5W150 140 aa3.81□□□□□ -1.8
SRGAP2-211ENST00000604423 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
SRGAP2-211ENST00000604423 PDZD2O15018 2839 aa3.81□□□□□ -1.8
SRGAP2-211ENST00000604423 TRRAPQ9Y4A5 3859 aa3.8□□□□□ -1.8
SRGAP2-211ENST00000604423 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SRGAP2-211ENST00000604423 CSAG1Q6PB30 78 aa3.8□□□□□ -1.8
SRGAP2-211ENST00000604423 KRTAP1-5Q9BYS1 174 aa3.8□□□□□ -1.8
SRGAP2-211ENST00000604423 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
SRGAP2-211ENST00000604423 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
SRGAP2-211ENST00000604423 TENM3Q9P273 2699 aa3.79□□□□□ -1.8
SRGAP2-211ENST00000604423 ITPR2Q14571 2701 aa3.79□□□□□ -1.8
SRGAP2-211ENST00000604423 TENM1Q9UKZ4 2725 aa3.79□□□□□ -1.8
SRGAP2-211ENST00000604423 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
SRGAP2-211ENST00000604423 ATRQ13535 2644 aa3.78□□□□□ -1.8
SRGAP2-211ENST00000604423 CSMD3Q7Z407 3707 aa3.78□□□□□ -1.8
SRGAP2-211ENST00000604423 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
SRGAP2-211ENST00000604423 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
SRGAP2-211ENST00000604423 ANK2Q01484 3957 aa3.76□□□□□ -1.81
SRGAP2-211ENST00000604423 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
SRGAP2-211ENST00000604423 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
SRGAP2-211ENST00000604423 PANO1I0J062 215 aa3.75□□□□□ -1.81
SRGAP2-211ENST00000604423 CIRBP-AS1Q8TBR5 109 aa3.75□□□□□ -1.81
SRGAP2-211ENST00000604423 SPACA4Q8TDM5 124 aa3.75□□□□□ -1.81
SRGAP2-211ENST00000604423 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
SRGAP2-211ENST00000604423 ZNF861PO60384 105 aa3.73□□□□□ -1.81
SRGAP2-211ENST00000604423 PSORS1C2Q9UIG4 136 aa3.73□□□□□ -1.81
SRGAP2-211ENST00000604423 IGLV5-52A0A0A0MRZ9 124 aa3.73□□□□□ -1.81
SRGAP2-211ENST00000604423 NSD1Q96L73 2696 aaPredicted RBP3.72□□□□□ -1.81
SRGAP2-211ENST00000604423 DNAH10Q8IVF4 4471 aa3.72□□□□□ -1.81
SRGAP2-211ENST00000604423 IGLV7-43P04211 117 aa3.72□□□□□ -1.81
SRGAP2-211ENST00000604423 IGKV2D-30A0A075B6S6 120 aa3.71□□□□□ -1.81
SRGAP2-211ENST00000604423 C1orf134Q5TEV5 83 aa3.71□□□□□ -1.82
SRGAP2-211ENST00000604423 NBDYA0A0U1RRE5 68 aa3.7□□□□□ -1.82
SRGAP2-211ENST00000604423 SPINK1P00995 79 aa3.69□□□□□ -1.82
SRGAP2-211ENST00000604423 LYSTQ99698 3801 aa3.69□□□□□ -1.82
SRGAP2-211ENST00000604423 APLNQ9ULZ1 77 aa3.69□□□□□ -1.82
SRGAP2-211ENST00000604423 FBN1P35555 2871 aaKnown RBP3.69□□□□□ -1.82
SRGAP2-211ENST00000604423 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
SRGAP2-211ENST00000604423 SSBP3-AS1Q7Z2R9 100 aa3.68□□□□□ -1.82
SRGAP2-211ENST00000604423 LY6G6CO95867 125 aa3.67□□□□□ -1.82
SRGAP2-211ENST00000604423 KRTAP24-1Q3LI83 254 aa3.66□□□□□ -1.82
SRGAP2-211ENST00000604423 DNAH9Q9NYC9 4486 aa3.66□□□□□ -1.82
SRGAP2-211ENST00000604423 A8MUU9 505 aa3.65□□□□□ -1.82
SRGAP2-211ENST00000604423 ROMO1P60602 79 aa3.65□□□□□ -1.82
SRGAP2-211ENST00000604423 Q6ZRN7 208 aaPredicted RBP3.65□□□□□ -1.82
SRGAP2-211ENST00000604423 A0A087WTM6 91 aa3.65□□□□□ -1.83
SRGAP2-211ENST00000604423 DNHD1Q96M86 4753 aa3.64□□□□□ -1.83
SRGAP2-211ENST00000604423 HUWE1Q7Z6Z7 4374 aaKnown RBP3.63□□□□□ -1.83
SRGAP2-211ENST00000604423 CMYA5Q8N3K9 4069 aa3.63□□□□□ -1.83
SRGAP2-211ENST00000604423 DNAH3Q8TD57 4116 aa3.63□□□□□ -1.83
SRGAP2-211ENST00000604423 K7ERS5 55 aa3.63□□□□□ -1.83
SRGAP2-211ENST00000604423 NBEAL1Q6ZS30 2694 aa3.62□□□□□ -1.83
SRGAP2-211ENST00000604423 NUPR2A6NF83 97 aa3.62□□□□□ -1.83
SRGAP2-211ENST00000604423 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
SRGAP2-211ENST00000604423 H0YAA0 97 aa3.62□□□□□ -1.83
SRGAP2-211ENST00000604423 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
SRGAP2-211ENST00000604423 FRAS1Q86XX4 4008 aa3.61□□□□□ -1.83
SRGAP2-211ENST00000604423 COL7A1Q02388 2944 aa3.61□□□□□ -1.83
SRGAP2-211ENST00000604423 A0A1B0GU33 70 aa3.6□□□□□ -1.83
SRGAP2-211ENST00000604423 NOTCH1P46531 2555 aa3.6□□□□□ -1.83
SRGAP2-211ENST00000604423 Q6ZSA8 131 aa3.6□□□□□ -1.83
SRGAP2-211ENST00000604423 COL6A5A8TX70 2615 aa3.59□□□□□ -1.83
SRGAP2-211ENST00000604423 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
SRGAP2-211ENST00000604423 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
SRGAP2-211ENST00000604423 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
SRGAP2-211ENST00000604423 STAB1Q9NY15 2570 aa3.57□□□□□ -1.84
SRGAP2-211ENST00000604423 DNAH8Q96JB1 4490 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms