RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 LINC00304Q8N9R0 145 aa9.08□□□□□ -0.96
CDCA3-211ENST00000603043 Q6ZQY7 126 aa9.07□□□□□ -0.96
CDCA3-211ENST00000603043 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
CDCA3-211ENST00000603043 Q6ZVQ6 151 aa9.06□□□□□ -0.96
CDCA3-211ENST00000603043 LAMTOR3Q9UHA4 124 aa9.06□□□□□ -0.96
CDCA3-211ENST00000603043 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
CDCA3-211ENST00000603043 Q8NBF4 154 aa9.06□□□□□ -0.96
CDCA3-211ENST00000603043 BRK1Q8WUW1 75 aa9.05□□□□□ -0.96
CDCA3-211ENST00000603043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-211ENST00000603043 SEC61GP60059 68 aa9.04□□□□□ -0.96
CDCA3-211ENST00000603043 SSBP3-AS1Q7Z2R9 100 aa9.04□□□□□ -0.96
CDCA3-211ENST00000603043 Q8N377 158 aa9.04□□□□□ -0.96
CDCA3-211ENST00000603043 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
CDCA3-211ENST00000603043 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
CDCA3-211ENST00000603043 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
CDCA3-211ENST00000603043 NREPQ16612 68 aa9□□□□□ -0.97
CDCA3-211ENST00000603043 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
CDCA3-211ENST00000603043 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
CDCA3-211ENST00000603043 SPINK1P00995 79 aa8.96□□□□□ -0.98
CDCA3-211ENST00000603043 A0A0U1RQV1 116 aa8.95□□□□□ -0.98
CDCA3-211ENST00000603043 BPY2O14599 106 aa8.94□□□□□ -0.98
CDCA3-211ENST00000603043 PRR15Q8IV56 129 aa8.92□□□□□ -0.98
CDCA3-211ENST00000603043 RPS29P62273 56 aaKnown RBP8.92□□□□□ -0.98
CDCA3-211ENST00000603043 RETNLBQ9BQ08 111 aa8.91□□□□□ -0.98
CDCA3-211ENST00000603043 PRR4Q16378 134 aa8.9□□□□□ -0.98
CDCA3-211ENST00000603043 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.98
CDCA3-211ENST00000603043 IGLV8-61A0A075B6I0 122 aa8.89□□□□□ -0.99
CDCA3-211ENST00000603043 A0A0G2JQZ4 141 aa8.89□□□□□ -0.99
CDCA3-211ENST00000603043 CD164Q04900 197 aa8.88□□□□□ -0.99
CDCA3-211ENST00000603043 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
CDCA3-211ENST00000603043 IGKV4-1P06312 121 aa8.85□□□□□ -0.99
CDCA3-211ENST00000603043 IGFL1Q6UW32 110 aa8.85□□□□□ -0.99
CDCA3-211ENST00000603043 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
CDCA3-211ENST00000603043 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
CDCA3-211ENST00000603043 Q1T7F1 81 aa8.84□□□□□ -0.99
CDCA3-211ENST00000603043 hDV103S1A0JD37 113 aa8.82□□□□□ -1
CDCA3-211ENST00000603043 LRP2P98164 4655 aa8.8□□□□□ -1
CDCA3-211ENST00000603043 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
CDCA3-211ENST00000603043 LPAP08519 4548 aa8.78□□□□□ -1
CDCA3-211ENST00000603043 A0A1B0GW54 56 aa8.75□□□□□ -1.01
CDCA3-211ENST00000603043 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
CDCA3-211ENST00000603043 UBR4Q5T4S7 5183 aa8.73□□□□□ -1.01
CDCA3-211ENST00000603043 Q8N9L7 120 aa8.72□□□□□ -1.01
CDCA3-211ENST00000603043 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
CDCA3-211ENST00000603043 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.02
CDCA3-211ENST00000603043 ZCCHC13Q8WW36 166 aaKnown RBP8.71□□□□□ -1.02
CDCA3-211ENST00000603043 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
CDCA3-211ENST00000603043 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
CDCA3-211ENST00000603043 A0A087WSZ3 146 aa8.68□□□□□ -1.02
CDCA3-211ENST00000603043 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
CDCA3-211ENST00000603043 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
CDCA3-211ENST00000603043 NDUFB1O75438 58 aa8.65□□□□□ -1.02
CDCA3-211ENST00000603043 PSPHP1O15172 72 aa8.61□□□□□ -1.03
CDCA3-211ENST00000603043 C9orf92A6NGG3 77 aa8.57□□□□□ -1.04
CDCA3-211ENST00000603043 Q96NJ1 140 aa8.56□□□□□ -1.04
CDCA3-211ENST00000603043 KTN1-AS1Q86SY8 53 aa8.55□□□□□ -1.04
CDCA3-211ENST00000603043 A8MUN3 132 aa8.55□□□□□ -1.04
CDCA3-211ENST00000603043 Q5VV11 94 aa8.55□□□□□ -1.04
CDCA3-211ENST00000603043 XP32Q5T750 250 aa8.54□□□□□ -1.04
CDCA3-211ENST00000603043 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
CDCA3-211ENST00000603043 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
CDCA3-211ENST00000603043 NDUFS5O43920 106 aa8.52□□□□□ -1.05
CDCA3-211ENST00000603043 DSCR10P59022 87 aa8.52□□□□□ -1.05
CDCA3-211ENST00000603043 MP68P56378 58 aa8.52□□□□□ -1.05
CDCA3-211ENST00000603043 RNF213Q63HN8 5207 aa8.51□□□□□ -1.05
CDCA3-211ENST00000603043 H3BPC8 53 aa8.51□□□□□ -1.05
CDCA3-211ENST00000603043 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
CDCA3-211ENST00000603043 K7EQZ3 153 aa8.48□□□□□ -1.05
CDCA3-211ENST00000603043 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
CDCA3-211ENST00000603043 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
CDCA3-211ENST00000603043 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
CDCA3-211ENST00000603043 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
CDCA3-211ENST00000603043 LINC00208Q96KT6 92 aa8.46□□□□□ -1.05
CDCA3-211ENST00000603043 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
CDCA3-211ENST00000603043 Q75L30 129 aa8.45□□□□□ -1.06
CDCA3-211ENST00000603043 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
CDCA3-211ENST00000603043 PRR15LQ9BU68 103 aa8.42□□□□□ -1.06
CDCA3-211ENST00000603043 MUC2Q02817 5179 aa8.42□□□□□ -1.06
CDCA3-211ENST00000603043 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
CDCA3-211ENST00000603043 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
CDCA3-211ENST00000603043 A6NN06 94 aa8.39□□□□□ -1.07
CDCA3-211ENST00000603043 A8MU10 97 aa8.39□□□□□ -1.07
CDCA3-211ENST00000603043 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
CDCA3-211ENST00000603043 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
CDCA3-211ENST00000603043 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
CDCA3-211ENST00000603043 H0Y9P7 68 aa8.37□□□□□ -1.07
CDCA3-211ENST00000603043 LINC00313P59037 77 aa8.37□□□□□ -1.07
CDCA3-211ENST00000603043 SPTSSBQ8NFR3 76 aa8.37□□□□□ -1.07
CDCA3-211ENST00000603043 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
CDCA3-211ENST00000603043 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
CDCA3-211ENST00000603043 A6NED7 52 aa8.35□□□□□ -1.07
CDCA3-211ENST00000603043 LCA10Q71F78 164 aa8.35□□□□□ -1.07
CDCA3-211ENST00000603043 WFDC13Q8IUB5 93 aa8.35□□□□□ -1.07
CDCA3-211ENST00000603043 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
CDCA3-211ENST00000603043 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
CDCA3-211ENST00000603043 A8MWP4 228 aa8.33□□□□□ -1.08
CDCA3-211ENST00000603043 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
CDCA3-211ENST00000603043 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
CDCA3-211ENST00000603043 KRTAP16-1A8MUX0 517 aa8.3□□□□□ -1.08
CDCA3-211ENST00000603043 COA5Q86WW8 74 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms