RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 C9JAW5 83 aa10.67□□□□□ -0.7
PPFIA3-209ENST00000602783 FAM236DA0A1B0GTK5 79 aa10.66□□□□□ -0.7
PPFIA3-209ENST00000602783 C8orf87E5RJ46 101 aa10.66□□□□□ -0.7
PPFIA3-209ENST00000602783 M0R143 59 aa10.66□□□□□ -0.7
PPFIA3-209ENST00000602783 FAM236CP0DP71 79 aa10.66□□□□□ -0.7
PPFIA3-209ENST00000602783 NAA38Q9BRA0 125 aaKnown RBP10.66□□□□□ -0.7
PPFIA3-209ENST00000602783 USH2AO75445 5202 aa10.65□□□□□ -0.7
PPFIA3-209ENST00000602783 ATXN8Q156A1 80 aa10.64□□□□□ -0.71
PPFIA3-209ENST00000602783 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
PPFIA3-209ENST00000602783 SSPOA2VEC9 5147 aa10.62□□□□□ -0.71
PPFIA3-209ENST00000602783 HRES1P13985 223 aa10.62□□□□□ -0.71
PPFIA3-209ENST00000602783 J3KT08 172 aa10.61□□□□□ -0.71
PPFIA3-209ENST00000602783 Q6ZQT0 140 aa10.61□□□□□ -0.71
PPFIA3-209ENST00000602783 MPLKIPQ8TAP9 179 aa10.59□□□□□ -0.71
PPFIA3-209ENST00000602783 RBM12B-AS1Q9P1G2 102 aa10.59□□□□□ -0.71
PPFIA3-209ENST00000602783 MT2AP02795 61 aa10.58□□□□□ -0.72
PPFIA3-209ENST00000602783 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.57□□□□□ -0.72
PPFIA3-209ENST00000602783 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
PPFIA3-209ENST00000602783 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
PPFIA3-209ENST00000602783 NDUFB1O75438 58 aa10.53□□□□□ -0.72
PPFIA3-209ENST00000602783 ZCCHC13Q8WW36 166 aaKnown RBP10.53□□□□□ -0.72
PPFIA3-209ENST00000602783 KRTAP9-7A8MTY7 169 aa10.52□□□□□ -0.73
PPFIA3-209ENST00000602783 BATFQ16520 125 aa10.52□□□□□ -0.73
PPFIA3-209ENST00000602783 C14orf132Q9NPU4 83 aa10.51□□□□□ -0.73
PPFIA3-209ENST00000602783 A0A1B0GW54 56 aa10.5□□□□□ -0.73
PPFIA3-209ENST00000602783 MT1FP04733 61 aa10.5□□□□□ -0.73
PPFIA3-209ENST00000602783 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
PPFIA3-209ENST00000602783 PDE6GP18545 87 aa10.49□□□□□ -0.73
PPFIA3-209ENST00000602783 A8MWP4 228 aa10.48□□□□□ -0.73
PPFIA3-209ENST00000602783 C8orf17Q9NRJ1 99 aa10.48□□□□□ -0.73
PPFIA3-209ENST00000602783 KRTAP10-10P60014 251 aa10.47□□□□□ -0.73
PPFIA3-209ENST00000602783 Q8N9P0 234 aaPredicted RBP10.47□□□□□ -0.73
PPFIA3-209ENST00000602783 IGKV3D-7A0A0C4DH55 119 aa10.45□□□□□ -0.74
PPFIA3-209ENST00000602783 LCE2BO14633 110 aa10.45□□□□□ -0.74
PPFIA3-209ENST00000602783 SPINK7P58062 85 aa10.44□□□□□ -0.74
PPFIA3-209ENST00000602783 KRTAP9-3Q9BYQ3 159 aa10.44□□□□□ -0.74
PPFIA3-209ENST00000602783 MTURNQ8N3F0 131 aa10.41□□□□□ -0.74
PPFIA3-209ENST00000602783 FCGBPQ9Y6R7 5405 aaPredicted RBP10.41□□□□□ -0.74
PPFIA3-209ENST00000602783 COL5A1-AS1Q5SY13 56 aa10.39□□□□□ -0.75
PPFIA3-209ENST00000602783 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
PPFIA3-209ENST00000602783 NREPQ16612 68 aa10.38□□□□□ -0.75
PPFIA3-209ENST00000602783 Q6ZVQ6 151 aa10.38□□□□□ -0.75
PPFIA3-209ENST00000602783 PRR15Q8IV56 129 aa10.37□□□□□ -0.75
PPFIA3-209ENST00000602783 MMP24-AS1A0A0U1RRL7 71 aa10.33□□□□□ -0.76
PPFIA3-209ENST00000602783 C9orf118A6NHY6 69 aa10.33□□□□□ -0.76
PPFIA3-209ENST00000602783 H3BT86 120 aa10.33□□□□□ -0.76
PPFIA3-209ENST00000602783 WFDC13Q8IUB5 93 aa10.33□□□□□ -0.76
PPFIA3-209ENST00000602783 TAX1BP3O14907 124 aa10.32□□□□□ -0.76
PPFIA3-209ENST00000602783 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
PPFIA3-209ENST00000602783 TMEM254Q8TBM7 123 aa10.3□□□□□ -0.76
PPFIA3-209ENST00000602783 MRPL34Q9BQ48 92 aaKnown RBP10.29□□□□□ -0.76
PPFIA3-209ENST00000602783 K7EQZ3 153 aa10.28□□□□□ -0.76
PPFIA3-209ENST00000602783 hDV103S1A0JD37 113 aa10.24□□□□□ -0.77
PPFIA3-209ENST00000602783 NDUFS5O43920 106 aa10.21□□□□□ -0.77
PPFIA3-209ENST00000602783 BPY2O14599 106 aa10.19□□□□□ -0.78
PPFIA3-209ENST00000602783 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
PPFIA3-209ENST00000602783 SPCS1Q9Y6A9 102 aa10.15□□□□□ -0.78
PPFIA3-209ENST00000602783 KRTAP19-6Q3LI70 58 aa10.12□□□□□ -0.79
PPFIA3-209ENST00000602783 Q8N9L7 120 aa10.12□□□□□ -0.79
PPFIA3-209ENST00000602783 IGKV2D-30A0A075B6S6 120 aa10.1□□□□□ -0.79
PPFIA3-209ENST00000602783 IGKV2-30P06310 120 aa10.1□□□□□ -0.79
PPFIA3-209ENST00000602783 SMCPP49901 116 aaPredicted RBP10.1□□□□□ -0.79
PPFIA3-209ENST00000602783 A0A1B0GV90 55 aa10.09□□□□□ -0.79
PPFIA3-209ENST00000602783 Q5W150 140 aa10.09□□□□□ -0.79
PPFIA3-209ENST00000602783 GTF2H5Q6ZYL4 71 aa10.09□□□□□ -0.79
PPFIA3-209ENST00000602783 MACF1Q9UPN3 7388 aaKnown RBP10.08□□□□□ -0.8
PPFIA3-209ENST00000602783 K7EP34 96 aa10.08□□□□□ -0.8
PPFIA3-209ENST00000602783 H1FX-AS1Q4G0G2 97 aa10.08□□□□□ -0.8
PPFIA3-209ENST00000602783 CASC2Q6XLA1 102 aa10.07□□□□□ -0.8
PPFIA3-209ENST00000602783 C7orf65Q6ZTY9 151 aa10.07□□□□□ -0.8
PPFIA3-209ENST00000602783 HCG22E2RYF7 251 aa10.04□□□□□ -0.8
PPFIA3-209ENST00000602783 SYNE2Q8WXH0 6885 aaKnown RBP10.01□□□□□ -0.81
PPFIA3-209ENST00000602783 PRO0461Q9UI25 63 aa10□□□□□ -0.81
PPFIA3-209ENST00000602783 UBL5Q9BZL1 73 aa9.97□□□□□ -0.81
PPFIA3-209ENST00000602783 CXCL6P80162 114 aa9.96□□□□□ -0.82
PPFIA3-209ENST00000602783 F8W1H4 67 aa9.93□□□□□ -0.82
PPFIA3-209ENST00000602783 C4orf26Q17RF5 130 aa9.92□□□□□ -0.82
PPFIA3-209ENST00000602783 KRTAP6-3Q3LI67 103 aa9.8□□□□□ -0.84
PPFIA3-209ENST00000602783 ETDBQ3ZM63 59 aa9.79□□□□□ -0.84
PPFIA3-209ENST00000602783 C5orf47Q569G3 176 aa9.76□□□□□ -0.85
PPFIA3-209ENST00000602783 KRTAP3-1Q9BYR8 98 aa9.76□□□□□ -0.85
PPFIA3-209ENST00000602783 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
PPFIA3-209ENST00000602783 S4R3F8 94 aa9.73□□□□□ -0.85
PPFIA3-209ENST00000602783 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
PPFIA3-209ENST00000602783 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
PPFIA3-209ENST00000602783 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
PPFIA3-209ENST00000602783 LCA10Q71F78 164 aa9.66□□□□□ -0.86
PPFIA3-209ENST00000602783 CSAG1Q6PB30 78 aa9.63□□□□□ -0.87
PPFIA3-209ENST00000602783 J3QR89 54 aa9.59□□□□□ -0.87
PPFIA3-209ENST00000602783 A6NN06 94 aa9.58□□□□□ -0.88
PPFIA3-209ENST00000602783 MT1BP07438 61 aa9.56□□□□□ -0.88
PPFIA3-209ENST00000602783 CYP4F30PQ9H0H9 118 aa9.56□□□□□ -0.88
PPFIA3-209ENST00000602783 Q5VV11 94 aa9.55□□□□□ -0.88
PPFIA3-209ENST00000602783 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
PPFIA3-209ENST00000602783 ACYP1P07311 99 aa9.52□□□□□ -0.89
PPFIA3-209ENST00000602783 K7ERU9 68 aa9.51□□□□□ -0.89
PPFIA3-209ENST00000602783 SPRR2GQ9BYE4 73 aa9.51□□□□□ -0.89
PPFIA3-209ENST00000602783 FAM240AA0A1B0GVK7 77 aa9.5□□□□□ -0.89
PPFIA3-209ENST00000602783 KRTAP19-8Q3LI54 63 aa9.5□□□□□ -0.89
PPFIA3-209ENST00000602783 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms