RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 A0A087WVE0 104 aa7.96□□□□□ -1.14
IRF3-229ENST00000601373 SPINK1P00995 79 aa7.96□□□□□ -1.14
IRF3-229ENST00000601373 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
IRF3-229ENST00000601373 LIMD2Q9BT23 127 aa7.95□□□□□ -1.14
IRF3-229ENST00000601373 CCDC179H3BU77 68 aa7.94□□□□□ -1.14
IRF3-229ENST00000601373 DSCR10P59022 87 aa7.94□□□□□ -1.14
IRF3-229ENST00000601373 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
IRF3-229ENST00000601373 TRAV7A0A075B6U4 112 aa7.93□□□□□ -1.14
IRF3-229ENST00000601373 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
IRF3-229ENST00000601373 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
IRF3-229ENST00000601373 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
IRF3-229ENST00000601373 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
IRF3-229ENST00000601373 Q96NJ1 140 aa7.92□□□□□ -1.14
IRF3-229ENST00000601373 A8MWP4 228 aa7.91□□□□□ -1.14
IRF3-229ENST00000601373 NDUFB1O75438 58 aa7.91□□□□□ -1.14
IRF3-229ENST00000601373 HMCN2Q8NDA2 5059 aa7.89□□□□□ -1.15
IRF3-229ENST00000601373 Q8N9L7 120 aa7.89□□□□□ -1.15
IRF3-229ENST00000601373 K7EQZ3 153 aa7.88□□□□□ -1.15
IRF3-229ENST00000601373 OXTP01178 125 aa7.88□□□□□ -1.15
IRF3-229ENST00000601373 PRR15Q8IV56 129 aa7.88□□□□□ -1.15
IRF3-229ENST00000601373 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
IRF3-229ENST00000601373 C1orf195Q5TG92 126 aa7.84□□□□□ -1.15
IRF3-229ENST00000601373 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
IRF3-229ENST00000601373 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
IRF3-229ENST00000601373 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
IRF3-229ENST00000601373 HCG22E2RYF7 251 aa7.82□□□□□ -1.16
IRF3-229ENST00000601373 NDUFC1O43677 76 aa7.82□□□□□ -1.16
IRF3-229ENST00000601373 TMEM258P61165 79 aa7.82□□□□□ -1.16
IRF3-229ENST00000601373 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
IRF3-229ENST00000601373 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
IRF3-229ENST00000601373 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
IRF3-229ENST00000601373 CASC2Q6XLA1 102 aa7.77□□□□□ -1.17
IRF3-229ENST00000601373 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
IRF3-229ENST00000601373 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
IRF3-229ENST00000601373 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
IRF3-229ENST00000601373 C20orf197Q8N268 126 aa7.75□□□□□ -1.17
IRF3-229ENST00000601373 hDV103S1A0JD37 113 aa7.74□□□□□ -1.17
IRF3-229ENST00000601373 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
IRF3-229ENST00000601373 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
IRF3-229ENST00000601373 LINC00313P59037 77 aa7.72□□□□□ -1.17
IRF3-229ENST00000601373 MT1HL1P0DM35 61 aa7.71□□□□□ -1.18
IRF3-229ENST00000601373 C5orf47Q569G3 176 aa7.71□□□□□ -1.18
IRF3-229ENST00000601373 TMEM254Q8TBM7 123 aa7.71□□□□□ -1.18
IRF3-229ENST00000601373 TNXBP22105 4242 aa7.7□□□□□ -1.18
IRF3-229ENST00000601373 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
IRF3-229ENST00000601373 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
IRF3-229ENST00000601373 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
IRF3-229ENST00000601373 H3BPC8 53 aa7.67□□□□□ -1.18
IRF3-229ENST00000601373 MP68P56378 58 aa7.65□□□□□ -1.18
IRF3-229ENST00000601373 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
IRF3-229ENST00000601373 TP53AIP1Q9HCN2 124 aa7.65□□□□□ -1.18
IRF3-229ENST00000601373 FAM236DA0A1B0GTK5 79 aa7.64□□□□□ -1.19
IRF3-229ENST00000601373 FAM236CP0DP71 79 aa7.64□□□□□ -1.19
IRF3-229ENST00000601373 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
IRF3-229ENST00000601373 H7BZZ5 65 aa7.63□□□□□ -1.19
IRF3-229ENST00000601373 RETNLBQ9BQ08 111 aa7.63□□□□□ -1.19
IRF3-229ENST00000601373 NDUFS5O43920 106 aa7.61□□□□□ -1.19
IRF3-229ENST00000601373 RNF213Q63HN8 5207 aa7.61□□□□□ -1.19
IRF3-229ENST00000601373 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
IRF3-229ENST00000601373 SNURFQ9Y675 71 aa7.6□□□□□ -1.19
IRF3-229ENST00000601373 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
IRF3-229ENST00000601373 LRP2P98164 4655 aa7.58□□□□□ -1.2
IRF3-229ENST00000601373 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
IRF3-229ENST00000601373 SERP1Q9Y6X1 66 aa7.56□□□□□ -1.2
IRF3-229ENST00000601373 IGLV7-46A0A075B6I9 117 aa7.55□□□□□ -1.2
IRF3-229ENST00000601373 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
IRF3-229ENST00000601373 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
IRF3-229ENST00000601373 H0Y9P7 68 aa7.53□□□□□ -1.2
IRF3-229ENST00000601373 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
IRF3-229ENST00000601373 A8MUU9 505 aa7.49□□□□□ -1.21
IRF3-229ENST00000601373 PRR4Q16378 134 aa7.49□□□□□ -1.21
IRF3-229ENST00000601373 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
IRF3-229ENST00000601373 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
IRF3-229ENST00000601373 KRTAP13-3Q3SY46 172 aa7.46□□□□□ -1.22
IRF3-229ENST00000601373 SPANXA2-OT1Q8N9U9 137 aa7.46□□□□□ -1.22
IRF3-229ENST00000601373 C1orf64Q8NEQ6 169 aa7.46□□□□□ -1.22
IRF3-229ENST00000601373 Q5W150 140 aa7.45□□□□□ -1.22
IRF3-229ENST00000601373 Q75L30 129 aa7.45□□□□□ -1.22
IRF3-229ENST00000601373 LOC101927531A0A1B0GV80 90 aa7.43□□□□□ -1.22
IRF3-229ENST00000601373 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
IRF3-229ENST00000601373 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
IRF3-229ENST00000601373 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
IRF3-229ENST00000601373 XP32Q5T750 250 aa7.38□□□□□ -1.23
IRF3-229ENST00000601373 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
IRF3-229ENST00000601373 IGKV2-30P06310 120 aa7.36□□□□□ -1.23
IRF3-229ENST00000601373 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
IRF3-229ENST00000601373 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
IRF3-229ENST00000601373 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
IRF3-229ENST00000601373 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
IRF3-229ENST00000601373 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
IRF3-229ENST00000601373 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
IRF3-229ENST00000601373 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
IRF3-229ENST00000601373 LPAP08519 4548 aa7.28□□□□□ -1.24
IRF3-229ENST00000601373 V9GYY9 64 aa7.28□□□□□ -1.24
IRF3-229ENST00000601373 MUC2Q02817 5179 aa7.25□□□□□ -1.25
IRF3-229ENST00000601373 SPINK7P58062 85 aa7.23□□□□□ -1.25
IRF3-229ENST00000601373 HRES1P13985 223 aa7.22□□□□□ -1.25
IRF3-229ENST00000601373 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
IRF3-229ENST00000601373 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
IRF3-229ENST00000601373 Q1T7F1 81 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms