RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 NBEAL1Q6ZS30 2694 aa6.55□□□□□ -1.36
ZNF558-207ENST00000601372 SEC61BP60468 96 aaKnown RBP6.54□□□□□ -1.36
ZNF558-207ENST00000601372 Q75L30 129 aa6.54□□□□□ -1.36
ZNF558-207ENST00000601372 VPS13CQ709C8 3753 aa6.54□□□□□ -1.36
ZNF558-207ENST00000601372 Q5W150 140 aa6.52□□□□□ -1.37
ZNF558-207ENST00000601372 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
ZNF558-207ENST00000601372 A0A087X002 238 aa6.5□□□□□ -1.37
ZNF558-207ENST00000601372 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
ZNF558-207ENST00000601372 SPINK7P58062 85 aa6.49□□□□□ -1.37
ZNF558-207ENST00000601372 PDZD2O15018 2839 aa6.49□□□□□ -1.37
ZNF558-207ENST00000601372 CSMD2Q7Z408 3487 aa6.49□□□□□ -1.37
ZNF558-207ENST00000601372 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
ZNF558-207ENST00000601372 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
ZNF558-207ENST00000601372 A0A0D9SG42 100 aa6.48□□□□□ -1.37
ZNF558-207ENST00000601372 NIPBLQ6KC79 2804 aaeCLIP6.48□□□□□ -1.37
ZNF558-207ENST00000601372 CUBNO60494 3623 aa6.46□□□□□ -1.38
ZNF558-207ENST00000601372 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
ZNF558-207ENST00000601372 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
ZNF558-207ENST00000601372 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
ZNF558-207ENST00000601372 LCA10Q71F78 164 aa6.43□□□□□ -1.38
ZNF558-207ENST00000601372 ANK3Q12955 4377 aaKnown RBP6.41□□□□□ -1.38
ZNF558-207ENST00000601372 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
ZNF558-207ENST00000601372 NF1P21359 2839 aa6.37□□□□□ -1.39
ZNF558-207ENST00000601372 S4R3F8 94 aa6.36□□□□□ -1.39
ZNF558-207ENST00000601372 A0A1B0GU33 70 aa6.34□□□□□ -1.39
ZNF558-207ENST00000601372 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
ZNF558-207ENST00000601372 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
ZNF558-207ENST00000601372 MXRA5Q9NR99 2828 aa6.33□□□□□ -1.4
ZNF558-207ENST00000601372 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
ZNF558-207ENST00000601372 OTOGQ6ZRI0 2925 aa6.31□□□□□ -1.4
ZNF558-207ENST00000601372 A8MU10 97 aa6.3□□□□□ -1.4
ZNF558-207ENST00000601372 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
ZNF558-207ENST00000601372 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
ZNF558-207ENST00000601372 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
ZNF558-207ENST00000601372 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
ZNF558-207ENST00000601372 AKAP9Q99996 3911 aa6.25□□□□□ -1.41
ZNF558-207ENST00000601372 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
ZNF558-207ENST00000601372 A0A1B0GVY2 172 aa6.19□□□□□ -1.42
ZNF558-207ENST00000601372 TENM2Q9NT68 2774 aa6.18□□□□□ -1.42
ZNF558-207ENST00000601372 FBN1P35555 2871 aaKnown RBP6.18□□□□□ -1.42
ZNF558-207ENST00000601372 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
ZNF558-207ENST00000601372 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
ZNF558-207ENST00000601372 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
ZNF558-207ENST00000601372 ZNF469Q96JG9 3925 aaPredicted RBP6.16□□□□□ -1.42
ZNF558-207ENST00000601372 A6NN06 94 aa6.13□□□□□ -1.43
ZNF558-207ENST00000601372 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
ZNF558-207ENST00000601372 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
ZNF558-207ENST00000601372 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
ZNF558-207ENST00000601372 R4GN34 69 aa6.11□□□□□ -1.43
ZNF558-207ENST00000601372 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
ZNF558-207ENST00000601372 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
ZNF558-207ENST00000601372 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
ZNF558-207ENST00000601372 TENM1Q9UKZ4 2725 aa6.07□□□□□ -1.44
ZNF558-207ENST00000601372 ROMO1P60602 79 aa6.03□□□□□ -1.44
ZNF558-207ENST00000601372 M0QZ58 72 aa6.02□□□□□ -1.45
ZNF558-207ENST00000601372 C20orf166-AS1Q96NR2 134 aa6.02□□□□□ -1.45
ZNF558-207ENST00000601372 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
ZNF558-207ENST00000601372 XP32Q5T750 250 aa5.98□□□□□ -1.45
ZNF558-207ENST00000601372 TENM3Q9P273 2699 aa5.98□□□□□ -1.45
ZNF558-207ENST00000601372 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
ZNF558-207ENST00000601372 VWFP04275 2813 aa5.96□□□□□ -1.46
ZNF558-207ENST00000601372 H3BS24 57 aa5.96□□□□□ -1.46
ZNF558-207ENST00000601372 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
ZNF558-207ENST00000601372 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
ZNF558-207ENST00000601372 A8MUU9 505 aa5.92□□□□□ -1.46
ZNF558-207ENST00000601372 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
ZNF558-207ENST00000601372 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
ZNF558-207ENST00000601372 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
ZNF558-207ENST00000601372 KRTAP13-3Q3SY46 172 aa5.85□□□□□ -1.47
ZNF558-207ENST00000601372 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.47
ZNF558-207ENST00000601372 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.48
ZNF558-207ENST00000601372 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
ZNF558-207ENST00000601372 TGP01266 2768 aa5.81□□□□□ -1.48
ZNF558-207ENST00000601372 H0YAA0 97 aa5.8□□□□□ -1.48
ZNF558-207ENST00000601372 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
ZNF558-207ENST00000601372 DNAH9Q9NYC9 4486 aa5.71□□□□□ -1.5
ZNF558-207ENST00000601372 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
ZNF558-207ENST00000601372 KRTAP4-5Q9BYR2 181 aa5.69□□□□□ -1.5
ZNF558-207ENST00000601372 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
ZNF558-207ENST00000601372 CMYA5Q8N3K9 4069 aa5.64□□□□□ -1.51
ZNF558-207ENST00000601372 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
ZNF558-207ENST00000601372 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
ZNF558-207ENST00000601372 P0C880 135 aa5.6□□□□□ -1.51
ZNF558-207ENST00000601372 ANK2Q01484 3957 aa5.6□□□□□ -1.51
ZNF558-207ENST00000601372 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
ZNF558-207ENST00000601372 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
ZNF558-207ENST00000601372 MT1HL1P0DM35 61 aa5.55□□□□□ -1.52
ZNF558-207ENST00000601372 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
ZNF558-207ENST00000601372 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
ZNF558-207ENST00000601372 DNAH3Q8TD57 4116 aa5.53□□□□□ -1.52
ZNF558-207ENST00000601372 PLECQ15149 4684 aaKnown RBP5.5□□□□□ -1.53
ZNF558-207ENST00000601372 LYSTQ99698 3801 aa5.5□□□□□ -1.53
ZNF558-207ENST00000601372 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
ZNF558-207ENST00000601372 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
ZNF558-207ENST00000601372 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
ZNF558-207ENST00000601372 TNP1P09430 55 aa5.46□□□□□ -1.54
ZNF558-207ENST00000601372 KRTAP10-4P60372 401 aaPredicted RBP5.45□□□□□ -1.54
ZNF558-207ENST00000601372 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
ZNF558-207ENST00000601372 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
ZNF558-207ENST00000601372 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms