RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 PANO1I0J062 215 aa5.67□□□□□ -1.5
NFKB1-212ENST00000600343 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
NFKB1-212ENST00000600343 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
NFKB1-212ENST00000600343 FLNCQ14315 2725 aa5.66□□□□□ -1.5
NFKB1-212ENST00000600343 K7ERS5 55 aa5.65□□□□□ -1.5
NFKB1-212ENST00000600343 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
NFKB1-212ENST00000600343 MGAM2Q2M2H8 2515 aa5.62□□□□□ -1.51
NFKB1-212ENST00000600343 A0A1B0GU33 70 aa5.62□□□□□ -1.51
NFKB1-212ENST00000600343 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
NFKB1-212ENST00000600343 HIVEP1P15822 2718 aa5.61□□□□□ -1.51
NFKB1-212ENST00000600343 ANK3Q12955 4377 aaKnown RBP5.61□□□□□ -1.51
NFKB1-212ENST00000600343 KRTAP10-3P60369 221 aa5.6□□□□□ -1.51
NFKB1-212ENST00000600343 C14orf177Q52M58 125 aa5.6□□□□□ -1.51
NFKB1-212ENST00000600343 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.51
NFKB1-212ENST00000600343 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.52
NFKB1-212ENST00000600343 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
NFKB1-212ENST00000600343 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
NFKB1-212ENST00000600343 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
NFKB1-212ENST00000600343 WWC2-AS2Q96NR7 200 aa5.57□□□□□ -1.52
NFKB1-212ENST00000600343 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
NFKB1-212ENST00000600343 TYMSOSQ8TAI1 123 aa5.56□□□□□ -1.52
NFKB1-212ENST00000600343 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
NFKB1-212ENST00000600343 NOTCH1P46531 2555 aa5.55□□□□□ -1.52
NFKB1-212ENST00000600343 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
NFKB1-212ENST00000600343 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
NFKB1-212ENST00000600343 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
NFKB1-212ENST00000600343 Q8N1X5 172 aa5.54□□□□□ -1.52
NFKB1-212ENST00000600343 MAST4O15021 2626 aa5.53□□□□□ -1.52
NFKB1-212ENST00000600343 VWFP04275 2813 aa5.51□□□□□ -1.53
NFKB1-212ENST00000600343 TEP1Q99973 2627 aaKnown RBP5.51□□□□□ -1.53
NFKB1-212ENST00000600343 IGSF10Q6WRI0 2623 aa5.51□□□□□ -1.53
NFKB1-212ENST00000600343 COL6A5A8TX70 2615 aa5.5□□□□□ -1.53
NFKB1-212ENST00000600343 CIRBP-AS1Q8TBR5 109 aa5.5□□□□□ -1.53
NFKB1-212ENST00000600343 ZNF469Q96JG9 3925 aaPredicted RBP5.49□□□□□ -1.53
NFKB1-212ENST00000600343 KRTAP1-3Q8IUG1 177 aa5.48□□□□□ -1.53
NFKB1-212ENST00000600343 C10orf95Q9H7T3 257 aa5.47□□□□□ -1.53
NFKB1-212ENST00000600343 DNAH1Q9P2D7 4330 aa5.46□□□□□ -1.53
NFKB1-212ENST00000600343 NBDYA0A0U1RRE5 68 aa5.46□□□□□ -1.54
NFKB1-212ENST00000600343 COL7A1Q02388 2944 aa5.46□□□□□ -1.54
NFKB1-212ENST00000600343 NBEAL1Q6ZS30 2694 aa5.46□□□□□ -1.54
NFKB1-212ENST00000600343 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.44□□□□□ -1.54
NFKB1-212ENST00000600343 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
NFKB1-212ENST00000600343 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
NFKB1-212ENST00000600343 MEGF8Q7Z7M0 2845 aa5.39□□□□□ -1.55
NFKB1-212ENST00000600343 TENM3Q9P273 2699 aa5.39□□□□□ -1.55
NFKB1-212ENST00000600343 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
NFKB1-212ENST00000600343 PDZD2O15018 2839 aa5.39□□□□□ -1.55
NFKB1-212ENST00000600343 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
NFKB1-212ENST00000600343 STAB1Q9NY15 2570 aa5.38□□□□□ -1.55
NFKB1-212ENST00000600343 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
NFKB1-212ENST00000600343 ITPR2Q14571 2701 aa5.37□□□□□ -1.55
NFKB1-212ENST00000600343 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
NFKB1-212ENST00000600343 SPACA4Q8TDM5 124 aa5.34□□□□□ -1.55
NFKB1-212ENST00000600343 NSD1Q96L73 2696 aaPredicted RBP5.34□□□□□ -1.56
NFKB1-212ENST00000600343 TENM4Q6N022 2769 aa5.33□□□□□ -1.56
NFKB1-212ENST00000600343 KRTAP10-11P60412 298 aa5.32□□□□□ -1.56
NFKB1-212ENST00000600343 A0A0D9SG42 100 aa5.32□□□□□ -1.56
NFKB1-212ENST00000600343 KRTAP24-1Q3LI83 254 aa5.3□□□□□ -1.56
NFKB1-212ENST00000600343 TGP01266 2768 aa5.3□□□□□ -1.56
NFKB1-212ENST00000600343 LYSTQ99698 3801 aa5.28□□□□□ -1.56
NFKB1-212ENST00000600343 FRAS1Q86XX4 4008 aa5.27□□□□□ -1.57
NFKB1-212ENST00000600343 APLNQ9ULZ1 77 aa5.27□□□□□ -1.57
NFKB1-212ENST00000600343 TENM1Q9UKZ4 2725 aa5.26□□□□□ -1.57
NFKB1-212ENST00000600343 STAB2Q8WWQ8 2551 aa5.25□□□□□ -1.57
NFKB1-212ENST00000600343 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
NFKB1-212ENST00000600343 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
NFKB1-212ENST00000600343 DNAH8Q96JB1 4490 aa5.24□□□□□ -1.57
NFKB1-212ENST00000600343 ANK2Q01484 3957 aa5.22□□□□□ -1.57
NFKB1-212ENST00000600343 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
NFKB1-212ENST00000600343 DNAH9Q9NYC9 4486 aa5.19□□□□□ -1.58
NFKB1-212ENST00000600343 S4R3F8 94 aa5.18□□□□□ -1.58
NFKB1-212ENST00000600343 KRTAP13-2Q52LG2 175 aa5.15□□□□□ -1.58
NFKB1-212ENST00000600343 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.58
NFKB1-212ENST00000600343 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
NFKB1-212ENST00000600343 Q6ZRN7 208 aaPredicted RBP5.12□□□□□ -1.59
NFKB1-212ENST00000600343 XP32Q5T750 250 aa5.12□□□□□ -1.59
NFKB1-212ENST00000600343 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
NFKB1-212ENST00000600343 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
NFKB1-212ENST00000600343 KRTAP3-2Q9BYR7 98 aa5.09□□□□□ -1.6
NFKB1-212ENST00000600343 CMYA5Q8N3K9 4069 aa5.05□□□□□ -1.6
NFKB1-212ENST00000600343 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
NFKB1-212ENST00000600343 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
NFKB1-212ENST00000600343 DNAH3Q8TD57 4116 aa5□□□□□ -1.61
NFKB1-212ENST00000600343 HUWE1Q7Z6Z7 4374 aaKnown RBP5□□□□□ -1.61
NFKB1-212ENST00000600343 VPS13DQ5THJ4 4388 aa4.98□□□□□ -1.61
NFKB1-212ENST00000600343 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
NFKB1-212ENST00000600343 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
NFKB1-212ENST00000600343 KMT2AQ03164 3969 aa4.96□□□□□ -1.61
NFKB1-212ENST00000600343 KRTAP3-3Q9BYR6 98 aa4.96□□□□□ -1.61
NFKB1-212ENST00000600343 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
NFKB1-212ENST00000600343 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
NFKB1-212ENST00000600343 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
NFKB1-212ENST00000600343 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
NFKB1-212ENST00000600343 KRTAP10-8P60410 259 aa4.85□□□□□ -1.63
NFKB1-212ENST00000600343 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
NFKB1-212ENST00000600343 DYNC2H1Q8NCM8 4307 aaKnown RBP4.82□□□□□ -1.64
NFKB1-212ENST00000600343 J3QL48 77 aa4.82□□□□□ -1.64
NFKB1-212ENST00000600343 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
NFKB1-212ENST00000600343 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
NFKB1-212ENST00000600343 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms