RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 A0A1B0GVX0 72 aa5□□□□□ -1.61
VRK3-215ENST00000599138 C9orf118A6NHY6 69 aa5□□□□□ -1.61
VRK3-215ENST00000599138 TAX1BP3O14907 124 aa5□□□□□ -1.61
VRK3-215ENST00000599138 PDE6GP18545 87 aa5□□□□□ -1.61
VRK3-215ENST00000599138 COX6B2Q6YFQ2 88 aa5□□□□□ -1.61
VRK3-215ENST00000599138 C8orf87E5RJ46 101 aa4.99□□□□□ -1.61
VRK3-215ENST00000599138 J3KT08 172 aa4.99□□□□□ -1.61
VRK3-215ENST00000599138 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
VRK3-215ENST00000599138 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
VRK3-215ENST00000599138 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
VRK3-215ENST00000599138 A0A1W2PPM0 123 aa4.97□□□□□ -1.61
VRK3-215ENST00000599138 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
VRK3-215ENST00000599138 H3BT86 120 aa4.96□□□□□ -1.62
VRK3-215ENST00000599138 A8MWP4 228 aa4.94□□□□□ -1.62
VRK3-215ENST00000599138 M0R2T5 61 aa4.93□□□□□ -1.62
VRK3-215ENST00000599138 NDUFB1O75438 58 aa4.93□□□□□ -1.62
VRK3-215ENST00000599138 IGKV3D-7A0A0C4DH55 119 aa4.92□□□□□ -1.62
VRK3-215ENST00000599138 MTURNQ8N3F0 131 aa4.92□□□□□ -1.62
VRK3-215ENST00000599138 Q8N9P0 234 aaPredicted RBP4.92□□□□□ -1.62
VRK3-215ENST00000599138 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
VRK3-215ENST00000599138 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
VRK3-215ENST00000599138 HRES1P13985 223 aa4.91□□□□□ -1.62
VRK3-215ENST00000599138 C8orf17Q9NRJ1 99 aa4.91□□□□□ -1.62
VRK3-215ENST00000599138 NREPQ16612 68 aa4.9□□□□□ -1.63
VRK3-215ENST00000599138 PRR15Q8IV56 129 aa4.9□□□□□ -1.63
VRK3-215ENST00000599138 ZCCHC13Q8WW36 166 aaKnown RBP4.9□□□□□ -1.63
VRK3-215ENST00000599138 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.63
VRK3-215ENST00000599138 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
VRK3-215ENST00000599138 COL5A1-AS1Q5SY13 56 aa4.89□□□□□ -1.63
VRK3-215ENST00000599138 SMCPP49901 116 aaPredicted RBP4.88□□□□□ -1.63
VRK3-215ENST00000599138 Q6ZVQ6 151 aa4.87□□□□□ -1.63
VRK3-215ENST00000599138 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
VRK3-215ENST00000599138 MMP24-AS1A0A0U1RRL7 71 aa4.86□□□□□ -1.63
VRK3-215ENST00000599138 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
VRK3-215ENST00000599138 K7EP34 96 aa4.84□□□□□ -1.63
VRK3-215ENST00000599138 K7EQZ3 153 aa4.84□□□□□ -1.63
VRK3-215ENST00000599138 SPINK7P58062 85 aa4.84□□□□□ -1.63
VRK3-215ENST00000599138 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
VRK3-215ENST00000599138 FAM236DA0A1B0GTK5 79 aa4.83□□□□□ -1.64
VRK3-215ENST00000599138 FAM236CP0DP71 79 aa4.83□□□□□ -1.64
VRK3-215ENST00000599138 MRPL34Q9BQ48 92 aaKnown RBP4.83□□□□□ -1.64
VRK3-215ENST00000599138 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
VRK3-215ENST00000599138 BPY2O14599 106 aa4.82□□□□□ -1.64
VRK3-215ENST00000599138 hDV103S1A0JD37 113 aa4.81□□□□□ -1.64
VRK3-215ENST00000599138 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
VRK3-215ENST00000599138 LINC00846Q9NV44 126 aa4.78□□□□□ -1.64
VRK3-215ENST00000599138 Q8N9L7 120 aa4.77□□□□□ -1.65
VRK3-215ENST00000599138 PCP4L1A6NKN8 68 aa4.76□□□□□ -1.65
VRK3-215ENST00000599138 MT2AP02795 61 aa4.76□□□□□ -1.65
VRK3-215ENST00000599138 GTF2H5Q6ZYL4 71 aa4.76□□□□□ -1.65
VRK3-215ENST00000599138 Q5W150 140 aa4.75□□□□□ -1.65
VRK3-215ENST00000599138 WFDC13Q8IUB5 93 aa4.75□□□□□ -1.65
VRK3-215ENST00000599138 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
VRK3-215ENST00000599138 F8W1H4 67 aa4.74□□□□□ -1.65
VRK3-215ENST00000599138 NDUFS5O43920 106 aa4.74□□□□□ -1.65
VRK3-215ENST00000599138 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
VRK3-215ENST00000599138 MT1FP04733 61 aa4.72□□□□□ -1.65
VRK3-215ENST00000599138 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
VRK3-215ENST00000599138 USH2AO75445 5202 aa4.72□□□□□ -1.65
VRK3-215ENST00000599138 HCG22E2RYF7 251 aa4.71□□□□□ -1.66
VRK3-215ENST00000599138 CXCL6P80162 114 aa4.7□□□□□ -1.66
VRK3-215ENST00000599138 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
VRK3-215ENST00000599138 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
VRK3-215ENST00000599138 C7orf65Q6ZTY9 151 aa4.69□□□□□ -1.66
VRK3-215ENST00000599138 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
VRK3-215ENST00000599138 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
VRK3-215ENST00000599138 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
VRK3-215ENST00000599138 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
VRK3-215ENST00000599138 LCE2BO14633 110 aa4.64□□□□□ -1.67
VRK3-215ENST00000599138 ACYP1P07311 99 aa4.62□□□□□ -1.67
VRK3-215ENST00000599138 TP53AIP1Q9HCN2 124 aa4.62□□□□□ -1.67
VRK3-215ENST00000599138 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
VRK3-215ENST00000599138 C4orf26Q17RF5 130 aa4.61□□□□□ -1.67
VRK3-215ENST00000599138 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
VRK3-215ENST00000599138 ATP5EP2Q5VTU8 51 aa4.57□□□□□ -1.68
VRK3-215ENST00000599138 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
VRK3-215ENST00000599138 A0A1B0GV90 55 aa4.53□□□□□ -1.68
VRK3-215ENST00000599138 C1orf64Q8NEQ6 169 aa4.53□□□□□ -1.68
VRK3-215ENST00000599138 CYP4F30PQ9H0H9 118 aa4.53□□□□□ -1.68
VRK3-215ENST00000599138 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
VRK3-215ENST00000599138 TRAV22A0A0B4J277 110 aa4.51□□□□□ -1.69
VRK3-215ENST00000599138 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
VRK3-215ENST00000599138 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
VRK3-215ENST00000599138 HIST1H4AP62805 103 aaKnown RBP4.5□□□□□ -1.69
VRK3-215ENST00000599138 S4R3F8 94 aa4.5□□□□□ -1.69
VRK3-215ENST00000599138 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
VRK3-215ENST00000599138 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
VRK3-215ENST00000599138 UQCRQO14949 82 aa4.48□□□□□ -1.69
VRK3-215ENST00000599138 LCA10Q71F78 164 aa4.48□□□□□ -1.69
VRK3-215ENST00000599138 A0A087WVE0 104 aa4.47□□□□□ -1.69
VRK3-215ENST00000599138 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
VRK3-215ENST00000599138 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
VRK3-215ENST00000599138 ATOX1O00244 68 aa4.45□□□□□ -1.7
VRK3-215ENST00000599138 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
VRK3-215ENST00000599138 H0Y9P7 68 aa4.44□□□□□ -1.7
VRK3-215ENST00000599138 OCR1Q9BZK8 76 aa4.42□□□□□ -1.7
VRK3-215ENST00000599138 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
VRK3-215ENST00000599138 FAM236AA0A1B0GUQ0 79 aa4.4□□□□□ -1.71
VRK3-215ENST00000599138 FAM236BA0A1B0GV22 79 aa4.4□□□□□ -1.71
VRK3-215ENST00000599138 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms