RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 C21orf62-AS1Q17RA5 79 aa11.87□□□□□ -0.51
IRF3-220ENST00000598108 MTURNQ8N3F0 131 aa11.87□□□□□ -0.51
IRF3-220ENST00000598108 PDE6GP18545 87 aa11.86□□□□□ -0.51
IRF3-220ENST00000598108 A0A1B0GVX0 72 aa11.84□□□□□ -0.51
IRF3-220ENST00000598108 A0A1B0GW54 56 aa11.82□□□□□ -0.52
IRF3-220ENST00000598108 H3BT86 120 aa11.82□□□□□ -0.52
IRF3-220ENST00000598108 J3KT08 172 aa11.82□□□□□ -0.52
IRF3-220ENST00000598108 C8orf87E5RJ46 101 aa11.78□□□□□ -0.52
IRF3-220ENST00000598108 COX6B2Q6YFQ2 88 aa11.77□□□□□ -0.53
IRF3-220ENST00000598108 SPCS1Q9Y6A9 102 aa11.77□□□□□ -0.53
IRF3-220ENST00000598108 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
IRF3-220ENST00000598108 KRTAP9-2Q9BYQ4 174 aa11.76□□□□□ -0.53
IRF3-220ENST00000598108 FLGP20930 4061 aaPredicted RBP11.73□□□□□ -0.53
IRF3-220ENST00000598108 A8MWP4 228 aa11.71□□□□□ -0.53
IRF3-220ENST00000598108 IGKV3D-7A0A0C4DH55 119 aa11.7□□□□□ -0.54
IRF3-220ENST00000598108 NDUFB1O75438 58 aa11.7□□□□□ -0.54
IRF3-220ENST00000598108 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
IRF3-220ENST00000598108 NREPQ16612 68 aa11.7□□□□□ -0.54
IRF3-220ENST00000598108 C8orf17Q9NRJ1 99 aa11.66□□□□□ -0.54
IRF3-220ENST00000598108 PRO0461Q9UI25 63 aa11.64□□□□□ -0.55
IRF3-220ENST00000598108 PCP4L1A6NKN8 68 aa11.63□□□□□ -0.55
IRF3-220ENST00000598108 M0R2T5 61 aa11.62□□□□□ -0.55
IRF3-220ENST00000598108 PRR15Q8IV56 129 aa11.62□□□□□ -0.55
IRF3-220ENST00000598108 K7EP34 96 aa11.61□□□□□ -0.55
IRF3-220ENST00000598108 KRTAP10-6P60371 365 aaPredicted RBP11.61□□□□□ -0.55
IRF3-220ENST00000598108 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
IRF3-220ENST00000598108 LORP23490 312 aaPredicted RBP11.59□□□□□ -0.55
IRF3-220ENST00000598108 ZCCHC13Q8WW36 166 aaKnown RBP11.58□□□□□ -0.56
IRF3-220ENST00000598108 HRES1P13985 223 aa11.55□□□□□ -0.56
IRF3-220ENST00000598108 Q6ZVQ6 151 aa11.55□□□□□ -0.56
IRF3-220ENST00000598108 K7EQZ3 153 aa11.53□□□□□ -0.56
IRF3-220ENST00000598108 MMP24-AS1A0A0U1RRL7 71 aa11.52□□□□□ -0.57
IRF3-220ENST00000598108 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
IRF3-220ENST00000598108 MPLKIPQ8TAP9 179 aa11.52□□□□□ -0.57
IRF3-220ENST00000598108 BPY2O14599 106 aa11.5□□□□□ -0.57
IRF3-220ENST00000598108 SPINK7P58062 85 aa11.46□□□□□ -0.57
IRF3-220ENST00000598108 GTF2H5Q6ZYL4 71 aa11.46□□□□□ -0.57
IRF3-220ENST00000598108 TMEM254Q8TBM7 123 aa11.46□□□□□ -0.57
IRF3-220ENST00000598108 MRPL34Q9BQ48 92 aaKnown RBP11.46□□□□□ -0.57
IRF3-220ENST00000598108 hDV103S1A0JD37 113 aa11.44□□□□□ -0.58
IRF3-220ENST00000598108 LINC00846Q9NV44 126 aa11.44□□□□□ -0.58
IRF3-220ENST00000598108 Q8N9L7 120 aa11.43□□□□□ -0.58
IRF3-220ENST00000598108 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
IRF3-220ENST00000598108 FAM236DA0A1B0GTK5 79 aa11.42□□□□□ -0.58
IRF3-220ENST00000598108 FAM236CP0DP71 79 aa11.42□□□□□ -0.58
IRF3-220ENST00000598108 F8W1H4 67 aa11.39□□□□□ -0.59
IRF3-220ENST00000598108 ETDBQ3ZM63 59 aa11.35□□□□□ -0.59
IRF3-220ENST00000598108 UBL5Q9BZL1 73 aa11.35□□□□□ -0.59
IRF3-220ENST00000598108 NDUFS5O43920 106 aa11.34□□□□□ -0.59
IRF3-220ENST00000598108 WFDC13Q8IUB5 93 aa11.33□□□□□ -0.6
IRF3-220ENST00000598108 CASC2Q6XLA1 102 aa11.3□□□□□ -0.6
IRF3-220ENST00000598108 KRTAP9-6A0A140TA67 174 aa11.29□□□□□ -0.6
IRF3-220ENST00000598108 KRTAP9-8Q9BYQ0 159 aa11.29□□□□□ -0.6
IRF3-220ENST00000598108 FSIP2Q5CZC0 6907 aa11.29□□□□□ -0.6
IRF3-220ENST00000598108 Q5W150 140 aa11.27□□□□□ -0.61
IRF3-220ENST00000598108 HCG22E2RYF7 251 aa11.23□□□□□ -0.61
IRF3-220ENST00000598108 IGKV2D-30A0A075B6S6 120 aa11.15□□□□□ -0.62
IRF3-220ENST00000598108 IGKV2-30P06310 120 aa11.15□□□□□ -0.62
IRF3-220ENST00000598108 CRCT1Q9UGL9 99 aa11.14□□□□□ -0.63
IRF3-220ENST00000598108 CXCL6P80162 114 aa11.13□□□□□ -0.63
IRF3-220ENST00000598108 MT2AP02795 61 aa11.12□□□□□ -0.63
IRF3-220ENST00000598108 C7orf65Q6ZTY9 151 aa11.1□□□□□ -0.63
IRF3-220ENST00000598108 MT1FP04733 61 aa11.05□□□□□ -0.64
IRF3-220ENST00000598108 ACYP1P07311 99 aa11.02□□□□□ -0.65
IRF3-220ENST00000598108 H1FX-AS1Q4G0G2 97 aa11.02□□□□□ -0.65
IRF3-220ENST00000598108 A0A1B0GV90 55 aa11.01□□□□□ -0.65
IRF3-220ENST00000598108 FAM240AA0A1B0GVK7 77 aa10.99□□□□□ -0.65
IRF3-220ENST00000598108 KRTAP10-10P60014 251 aa10.98□□□□□ -0.65
IRF3-220ENST00000598108 C4orf26Q17RF5 130 aa10.97□□□□□ -0.65
IRF3-220ENST00000598108 TP53AIP1Q9HCN2 124 aa10.95□□□□□ -0.66
IRF3-220ENST00000598108 USH2AO75445 5202 aa10.92□□□□□ -0.66
IRF3-220ENST00000598108 KRTAP9-3Q9BYQ3 159 aa10.92□□□□□ -0.66
IRF3-220ENST00000598108 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
IRF3-220ENST00000598108 KRTAP3-1Q9BYR8 98 aa10.86□□□□□ -0.67
IRF3-220ENST00000598108 LCE2BO14633 110 aa10.84□□□□□ -0.67
IRF3-220ENST00000598108 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
IRF3-220ENST00000598108 LINC00643Q86TS7 51 aa10.8□□□□□ -0.68
IRF3-220ENST00000598108 SSPOA2VEC9 5147 aa10.78□□□□□ -0.68
IRF3-220ENST00000598108 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.69
IRF3-220ENST00000598108 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
IRF3-220ENST00000598108 A0A087WVE0 104 aa10.75□□□□□ -0.69
IRF3-220ENST00000598108 TRAV22A0A0B4J277 110 aa10.74□□□□□ -0.69
IRF3-220ENST00000598108 UQCRQO14949 82 aa10.69□□□□□ -0.7
IRF3-220ENST00000598108 C5orf47Q569G3 176 aa10.67□□□□□ -0.7
IRF3-220ENST00000598108 LOC101927531A0A1B0GV80 90 aa10.66□□□□□ -0.7
IRF3-220ENST00000598108 S4R3F8 94 aa10.66□□□□□ -0.7
IRF3-220ENST00000598108 H0Y9P7 68 aa10.62□□□□□ -0.71
IRF3-220ENST00000598108 LCA10Q71F78 164 aa10.62□□□□□ -0.71
IRF3-220ENST00000598108 J3QR89 54 aa10.59□□□□□ -0.71
IRF3-220ENST00000598108 ATOX1O00244 68 aa10.57□□□□□ -0.72
IRF3-220ENST00000598108 CSAG1Q6PB30 78 aa10.56□□□□□ -0.72
IRF3-220ENST00000598108 KRTAP19-1Q8IUB9 90 aa10.55□□□□□ -0.72
IRF3-220ENST00000598108 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
IRF3-220ENST00000598108 OCR1Q9BZK8 76 aa10.53□□□□□ -0.72
IRF3-220ENST00000598108 FCGBPQ9Y6R7 5405 aaPredicted RBP10.52□□□□□ -0.73
IRF3-220ENST00000598108 LINC00208Q96KT6 92 aa10.48□□□□□ -0.73
IRF3-220ENST00000598108 KLKP1Q107X0 134 aa10.45□□□□□ -0.74
IRF3-220ENST00000598108 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
IRF3-220ENST00000598108 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
IRF3-220ENST00000598108 MP68P56378 58 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms