RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
LIG1-215ENST00000597901 Q6ZQT0 140 aa7.62□□□□□ -1.19
LIG1-215ENST00000597901 J3KT08 172 aa7.6□□□□□ -1.19
LIG1-215ENST00000597901 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
LIG1-215ENST00000597901 HRES1P13985 223 aa7.58□□□□□ -1.2
LIG1-215ENST00000597901 MPLKIPQ8TAP9 179 aa7.57□□□□□ -1.2
LIG1-215ENST00000597901 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
LIG1-215ENST00000597901 LOC110117498A0A087WWA1 95 aa7.56□□□□□ -1.2
LIG1-215ENST00000597901 FAM236DA0A1B0GTK5 79 aa7.56□□□□□ -1.2
LIG1-215ENST00000597901 FAM236CP0DP71 79 aa7.56□□□□□ -1.2
LIG1-215ENST00000597901 A0A1B0GW54 56 aa7.55□□□□□ -1.2
LIG1-215ENST00000597901 NDUFB1O75438 58 aa7.55□□□□□ -1.2
LIG1-215ENST00000597901 RBM12B-AS1Q9P1G2 102 aa7.55□□□□□ -1.2
LIG1-215ENST00000597901 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
LIG1-215ENST00000597901 PDE6GP18545 87 aa7.54□□□□□ -1.2
LIG1-215ENST00000597901 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
LIG1-215ENST00000597901 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
LIG1-215ENST00000597901 C14orf132Q9NPU4 83 aa7.51□□□□□ -1.21
LIG1-215ENST00000597901 A8MWP4 228 aa7.5□□□□□ -1.21
LIG1-215ENST00000597901 IGKV3D-7A0A0C4DH55 119 aa7.49□□□□□ -1.21
LIG1-215ENST00000597901 SPINK7P58062 85 aa7.49□□□□□ -1.21
LIG1-215ENST00000597901 LYRM7Q5U5X0 104 aa7.49□□□□□ -1.21
LIG1-215ENST00000597901 C8orf17Q9NRJ1 99 aa7.49□□□□□ -1.21
LIG1-215ENST00000597901 BATFQ16520 125 aa7.48□□□□□ -1.21
LIG1-215ENST00000597901 TSTD3H0UI37 97 aa7.47□□□□□ -1.21
LIG1-215ENST00000597901 NREPQ16612 68 aa7.46□□□□□ -1.22
LIG1-215ENST00000597901 MT2AP02795 61 aa7.44□□□□□ -1.22
LIG1-215ENST00000597901 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
LIG1-215ENST00000597901 MTURNQ8N3F0 131 aa7.44□□□□□ -1.22
LIG1-215ENST00000597901 C9orf118A6NHY6 69 aa7.43□□□□□ -1.22
LIG1-215ENST00000597901 Q6ZVQ6 151 aa7.43□□□□□ -1.22
LIG1-215ENST00000597901 TAX1BP3O14907 124 aa7.4□□□□□ -1.22
LIG1-215ENST00000597901 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
LIG1-215ENST00000597901 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
LIG1-215ENST00000597901 H3BT86 120 aa7.38□□□□□ -1.23
LIG1-215ENST00000597901 MT1FP04733 61 aa7.38□□□□□ -1.23
LIG1-215ENST00000597901 MRPL34Q9BQ48 92 aaKnown RBP7.37□□□□□ -1.23
LIG1-215ENST00000597901 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
LIG1-215ENST00000597901 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
LIG1-215ENST00000597901 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
LIG1-215ENST00000597901 USH2AO75445 5202 aa7.34□□□□□ -1.23
LIG1-215ENST00000597901 WFDC13Q8IUB5 93 aa7.34□□□□□ -1.23
LIG1-215ENST00000597901 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
LIG1-215ENST00000597901 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
LIG1-215ENST00000597901 K7EQZ3 153 aa7.33□□□□□ -1.24
LIG1-215ENST00000597901 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
LIG1-215ENST00000597901 BPY2O14599 106 aa7.31□□□□□ -1.24
LIG1-215ENST00000597901 LCE2BO14633 110 aa7.3□□□□□ -1.24
LIG1-215ENST00000597901 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
LIG1-215ENST00000597901 NDUFS5O43920 106 aa7.29□□□□□ -1.24
LIG1-215ENST00000597901 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
LIG1-215ENST00000597901 SPCS1Q9Y6A9 102 aa7.28□□□□□ -1.24
LIG1-215ENST00000597901 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
LIG1-215ENST00000597901 Q5W150 140 aa7.25□□□□□ -1.25
LIG1-215ENST00000597901 Q8N9L7 120 aa7.23□□□□□ -1.25
LIG1-215ENST00000597901 H1FX-AS1Q4G0G2 97 aa7.22□□□□□ -1.25
LIG1-215ENST00000597901 LINC00846Q9NV44 126 aa7.22□□□□□ -1.25
LIG1-215ENST00000597901 CASC2Q6XLA1 102 aa7.21□□□□□ -1.26
LIG1-215ENST00000597901 IGKV2D-30A0A075B6S6 120 aa7.2□□□□□ -1.26
LIG1-215ENST00000597901 IGKV2-30P06310 120 aa7.2□□□□□ -1.26
LIG1-215ENST00000597901 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
LIG1-215ENST00000597901 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
LIG1-215ENST00000597901 COL5A1-AS1Q5SY13 56 aa7.18□□□□□ -1.26
LIG1-215ENST00000597901 PRO0461Q9UI25 63 aa7.18□□□□□ -1.26
LIG1-215ENST00000597901 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
LIG1-215ENST00000597901 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
LIG1-215ENST00000597901 K7EP34 96 aa7.13□□□□□ -1.27
LIG1-215ENST00000597901 CXCL6P80162 114 aa7.13□□□□□ -1.27
LIG1-215ENST00000597901 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
LIG1-215ENST00000597901 C4orf26Q17RF5 130 aa7.1□□□□□ -1.27
LIG1-215ENST00000597901 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
LIG1-215ENST00000597901 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
LIG1-215ENST00000597901 F8W1H4 67 aa7.03□□□□□ -1.28
LIG1-215ENST00000597901 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
LIG1-215ENST00000597901 PCP4L1A6NKN8 68 aa7.01□□□□□ -1.29
LIG1-215ENST00000597901 ETDBQ3ZM63 59 aa6.99□□□□□ -1.29
LIG1-215ENST00000597901 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
LIG1-215ENST00000597901 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
LIG1-215ENST00000597901 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
LIG1-215ENST00000597901 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.29
LIG1-215ENST00000597901 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
LIG1-215ENST00000597901 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
LIG1-215ENST00000597901 S4R3F8 94 aa6.92□□□□□ -1.3
LIG1-215ENST00000597901 LCA10Q71F78 164 aa6.89□□□□□ -1.31
LIG1-215ENST00000597901 FAM236AA0A1B0GUQ0 79 aa6.87□□□□□ -1.31
LIG1-215ENST00000597901 FAM236BA0A1B0GV22 79 aa6.87□□□□□ -1.31
LIG1-215ENST00000597901 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
LIG1-215ENST00000597901 ACYP1P07311 99 aa6.85□□□□□ -1.31
LIG1-215ENST00000597901 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
LIG1-215ENST00000597901 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
LIG1-215ENST00000597901 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
LIG1-215ENST00000597901 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
LIG1-215ENST00000597901 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
LIG1-215ENST00000597901 A0A087WVE0 104 aa6.77□□□□□ -1.33
LIG1-215ENST00000597901 FAM240AA0A1B0GVK7 77 aa6.77□□□□□ -1.33
LIG1-215ENST00000597901 MT1BP07438 61 aa6.77□□□□□ -1.33
LIG1-215ENST00000597901 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.33
LIG1-215ENST00000597901 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
LIG1-215ENST00000597901 ATP5EP2Q5VTU8 51 aa6.76□□□□□ -1.33
LIG1-215ENST00000597901 UQCRQO14949 82 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms