RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 A0A1B0GVX0 72 aa12□□□□□ -0.49
CHMP2A-204ENST00000597848 LINC00313P59037 77 aa12□□□□□ -0.49
CHMP2A-204ENST00000597848 UBL5Q9BZL1 73 aa11.99□□□□□ -0.49
CHMP2A-204ENST00000597848 SEC61BP60468 96 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-204ENST00000597848 A8MWP4 228 aa11.97□□□□□ -0.49
CHMP2A-204ENST00000597848 BPY2O14599 106 aa11.96□□□□□ -0.49
CHMP2A-204ENST00000597848 NOTCH2NLQ7Z3S9 236 aa11.95□□□□□ -0.5
CHMP2A-204ENST00000597848 IGKV3D-7A0A0C4DH55 119 aa11.93□□□□□ -0.5
CHMP2A-204ENST00000597848 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
CHMP2A-204ENST00000597848 RPL37P61927 97 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-204ENST00000597848 PRR15Q8IV56 129 aa11.89□□□□□ -0.51
CHMP2A-204ENST00000597848 ACYP1P07311 99 aa11.88□□□□□ -0.51
CHMP2A-204ENST00000597848 PCOTHQ58A44 107 aa11.88□□□□□ -0.51
CHMP2A-204ENST00000597848 Q75L30 129 aa11.88□□□□□ -0.51
CHMP2A-204ENST00000597848 C8orf17Q9NRJ1 99 aa11.86□□□□□ -0.51
CHMP2A-204ENST00000597848 KRTAP16-1A8MUX0 517 aa11.85□□□□□ -0.51
CHMP2A-204ENST00000597848 K7EQZ3 153 aa11.85□□□□□ -0.51
CHMP2A-204ENST00000597848 C20orf166-AS1Q96NR2 134 aa11.85□□□□□ -0.51
CHMP2A-204ENST00000597848 FAM240AA0A1B0GVK7 77 aa11.84□□□□□ -0.51
CHMP2A-204ENST00000597848 A8MUU9 505 aa11.83□□□□□ -0.52
CHMP2A-204ENST00000597848 RNF213Q63HN8 5207 aa11.82□□□□□ -0.52
CHMP2A-204ENST00000597848 ATP11AUNQ6ZP68 121 aa11.82□□□□□ -0.52
CHMP2A-204ENST00000597848 Q8N9L7 120 aa11.81□□□□□ -0.52
CHMP2A-204ENST00000597848 MUC17Q685J3 4493 aa11.79□□□□□ -0.52
CHMP2A-204ENST00000597848 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
CHMP2A-204ENST00000597848 J3QR89 54 aa11.76□□□□□ -0.53
CHMP2A-204ENST00000597848 CXCL6P80162 114 aa11.74□□□□□ -0.53
CHMP2A-204ENST00000597848 hDV103S1A0JD37 113 aa11.72□□□□□ -0.53
CHMP2A-204ENST00000597848 KRTAP4-1Q9BYQ7 146 aa11.72□□□□□ -0.53
CHMP2A-204ENST00000597848 TMEM254Q8TBM7 123 aa11.71□□□□□ -0.53
CHMP2A-204ENST00000597848 WFDC13Q8IUB5 93 aa11.69□□□□□ -0.54
CHMP2A-204ENST00000597848 MRPL34Q9BQ48 92 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-204ENST00000597848 Q8N9P0 234 aaPredicted RBP11.68□□□□□ -0.54
CHMP2A-204ENST00000597848 CASC2Q6XLA1 102 aa11.67□□□□□ -0.54
CHMP2A-204ENST00000597848 ATP5EP2Q5VTU8 51 aa11.65□□□□□ -0.54
CHMP2A-204ENST00000597848 NDUFS5O43920 106 aa11.63□□□□□ -0.55
CHMP2A-204ENST00000597848 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
CHMP2A-204ENST00000597848 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
CHMP2A-204ENST00000597848 ZCCHC13Q8WW36 166 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-204ENST00000597848 MUC2Q02817 5179 aa11.58□□□□□ -0.55
CHMP2A-204ENST00000597848 A0A0U1RQV1 116 aa11.56□□□□□ -0.56
CHMP2A-204ENST00000597848 HIST1H4AP62805 103 aaKnown RBP11.56□□□□□ -0.56
CHMP2A-204ENST00000597848 K7ERU9 68 aa11.55□□□□□ -0.56
CHMP2A-204ENST00000597848 A0A087WVE0 104 aa11.42□□□□□ -0.58
CHMP2A-204ENST00000597848 Q5W150 140 aa11.41□□□□□ -0.58
CHMP2A-204ENST00000597848 SPINK7P58062 85 aa11.4□□□□□ -0.58
CHMP2A-204ENST00000597848 TP53AIP1Q9HCN2 124 aa11.37□□□□□ -0.59
CHMP2A-204ENST00000597848 COX6B2Q6YFQ2 88 aa11.35□□□□□ -0.59
CHMP2A-204ENST00000597848 KRTAP19-2Q3LHN2 52 aa11.33□□□□□ -0.6
CHMP2A-204ENST00000597848 HRES1P13985 223 aa11.3□□□□□ -0.6
CHMP2A-204ENST00000597848 FAT4Q6V0I7 4981 aa11.3□□□□□ -0.6
CHMP2A-204ENST00000597848 IGKV2D-30A0A075B6S6 120 aa11.29□□□□□ -0.6
CHMP2A-204ENST00000597848 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
CHMP2A-204ENST00000597848 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
CHMP2A-204ENST00000597848 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
CHMP2A-204ENST00000597848 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
CHMP2A-204ENST00000597848 C7orf65Q6ZTY9 151 aa11.25□□□□□ -0.61
CHMP2A-204ENST00000597848 IMUPQ9GZP8 106 aa11.24□□□□□ -0.61
CHMP2A-204ENST00000597848 FAM236DA0A1B0GTK5 79 aa11.23□□□□□ -0.61
CHMP2A-204ENST00000597848 FAM236CP0DP71 79 aa11.23□□□□□ -0.61
CHMP2A-204ENST00000597848 UQCRQO14949 82 aa11.21□□□□□ -0.61
CHMP2A-204ENST00000597848 MPLKIPQ8TAP9 179 aa11.21□□□□□ -0.61
CHMP2A-204ENST00000597848 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
CHMP2A-204ENST00000597848 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
CHMP2A-204ENST00000597848 LCE2AQ5TA79 106 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-204ENST00000597848 MT1HP80294 61 aa11.13□□□□□ -0.63
CHMP2A-204ENST00000597848 H0Y9P7 68 aa11.12□□□□□ -0.63
CHMP2A-204ENST00000597848 OCR1Q9BZK8 76 aa11.12□□□□□ -0.63
CHMP2A-204ENST00000597848 ATOX1O00244 68 aa11.08□□□□□ -0.64
CHMP2A-204ENST00000597848 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
CHMP2A-204ENST00000597848 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
CHMP2A-204ENST00000597848 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
CHMP2A-204ENST00000597848 M0R2T5 61 aa11.06□□□□□ -0.64
CHMP2A-204ENST00000597848 CYP4F30PQ9H0H9 118 aa11.05□□□□□ -0.64
CHMP2A-204ENST00000597848 MP68P56378 58 aa11.03□□□□□ -0.64
CHMP2A-204ENST00000597848 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
CHMP2A-204ENST00000597848 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
CHMP2A-204ENST00000597848 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
CHMP2A-204ENST00000597848 LINC00208Q96KT6 92 aa11□□□□□ -0.65
CHMP2A-204ENST00000597848 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.65
CHMP2A-204ENST00000597848 FLGP20930 4061 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-204ENST00000597848 H1FX-AS1Q4G0G2 97 aa10.93□□□□□ -0.66
CHMP2A-204ENST00000597848 TRAV7A0A075B6U4 112 aa10.91□□□□□ -0.66
CHMP2A-204ENST00000597848 H3BPC8 53 aa10.9□□□□□ -0.66
CHMP2A-204ENST00000597848 KRTAP10-6P60371 365 aaPredicted RBP10.84□□□□□ -0.67
CHMP2A-204ENST00000597848 KLKP1Q107X0 134 aa10.83□□□□□ -0.68
CHMP2A-204ENST00000597848 KRTAP3-1Q9BYR8 98 aa10.83□□□□□ -0.68
CHMP2A-204ENST00000597848 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-204ENST00000597848 SERP2Q8N6R1 65 aa10.75□□□□□ -0.69
CHMP2A-204ENST00000597848 S4R3F8 94 aa10.7□□□□□ -0.7
CHMP2A-204ENST00000597848 SNURFQ9Y675 71 aa10.66□□□□□ -0.7
CHMP2A-204ENST00000597848 C20orf197Q8N268 126 aa10.64□□□□□ -0.71
CHMP2A-204ENST00000597848 A8MUN3 132 aa10.63□□□□□ -0.71
CHMP2A-204ENST00000597848 LCA10Q71F78 164 aa10.61□□□□□ -0.71
CHMP2A-204ENST00000597848 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
CHMP2A-204ENST00000597848 COX7CP15954 63 aa10.57□□□□□ -0.72
CHMP2A-204ENST00000597848 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
CHMP2A-204ENST00000597848 MT2AP02795 61 aa10.53□□□□□ -0.72
CHMP2A-204ENST00000597848 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
CHMP2A-204ENST00000597848 ANAPC13Q9BS18 74 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms