RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 WFDC13Q8IUB5 93 aa13.08□□□□□ -0.32
SPTBN4-210ENST00000596900 MMP24-AS1A0A0U1RRL7 71 aa13.06□□□□□ -0.32
SPTBN4-210ENST00000596900 C8orf17Q9NRJ1 99 aa13.06□□□□□ -0.32
SPTBN4-210ENST00000596900 SERP2Q8N6R1 65 aa13.03□□□□□ -0.32
SPTBN4-210ENST00000596900 hDV103S1A0JD37 113 aa13.02□□□□□ -0.32
SPTBN4-210ENST00000596900 KRTAP29-1A8MX34 341 aaPredicted RBP13.02□□□□□ -0.32
SPTBN4-210ENST00000596900 C8orf87E5RJ46 101 aa13.02□□□□□ -0.32
SPTBN4-210ENST00000596900 TRAV7A0A075B6U4 112 aa13□□□□□ -0.33
SPTBN4-210ENST00000596900 LRP1Q07954 4544 aaKnown RBP12.99□□□□□ -0.33
SPTBN4-210ENST00000596900 OXTP01178 125 aa12.99□□□□□ -0.33
SPTBN4-210ENST00000596900 FLG2Q5D862 2391 aaPredicted RBP12.98□□□□□ -0.33
SPTBN4-210ENST00000596900 COX7CP15954 63 aa12.97□□□□□ -0.33
SPTBN4-210ENST00000596900 OCR1Q9BZK8 76 aa12.96□□□□□ -0.33
SPTBN4-210ENST00000596900 LINC00313P59037 77 aa12.95□□□□□ -0.34
SPTBN4-210ENST00000596900 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
SPTBN4-210ENST00000596900 UQCRQO14949 82 aa12.94□□□□□ -0.34
SPTBN4-210ENST00000596900 TMEM254Q8TBM7 123 aa12.94□□□□□ -0.34
SPTBN4-210ENST00000596900 TNXBP22105 4242 aa12.94□□□□□ -0.34
SPTBN4-210ENST00000596900 KRTAP4-5Q9BYR2 181 aa12.93□□□□□ -0.34
SPTBN4-210ENST00000596900 NOTCH2NLQ7Z3S9 236 aa12.93□□□□□ -0.34
SPTBN4-210ENST00000596900 MT1HL1P0DM35 61 aa12.92□□□□□ -0.34
SPTBN4-210ENST00000596900 MRPL34Q9BQ48 92 aaKnown RBP12.92□□□□□ -0.34
SPTBN4-210ENST00000596900 BIRC6Q9NR09 4857 aa12.91□□□□□ -0.34
SPTBN4-210ENST00000596900 RETNLBQ9BQ08 111 aa12.86□□□□□ -0.35
SPTBN4-210ENST00000596900 CCDC179H3BU77 68 aa12.85□□□□□ -0.35
SPTBN4-210ENST00000596900 MYCBP2O75592 4640 aa12.85□□□□□ -0.35
SPTBN4-210ENST00000596900 TP53AIP1Q9HCN2 124 aa12.84□□□□□ -0.35
SPTBN4-210ENST00000596900 NDUFS5O43920 106 aa12.83□□□□□ -0.36
SPTBN4-210ENST00000596900 C5orf47Q569G3 176 aa12.79□□□□□ -0.36
SPTBN4-210ENST00000596900 FP248Q71RG6 208 aaPredicted RBP12.79□□□□□ -0.36
SPTBN4-210ENST00000596900 DMBT1Q9UGM3 2413 aaPredicted RBP12.78□□□□□ -0.36
SPTBN4-210ENST00000596900 C20orf197Q8N268 126 aa12.77□□□□□ -0.37
SPTBN4-210ENST00000596900 KRTAP16-1A8MUX0 517 aa12.76□□□□□ -0.37
SPTBN4-210ENST00000596900 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
SPTBN4-210ENST00000596900 HERC2O95714 4834 aa12.74□□□□□ -0.37
SPTBN4-210ENST00000596900 MP68P56378 58 aa12.73□□□□□ -0.37
SPTBN4-210ENST00000596900 TRAV22A0A0B4J277 110 aa12.71□□□□□ -0.37
SPTBN4-210ENST00000596900 KLKP1Q107X0 134 aa12.7□□□□□ -0.38
SPTBN4-210ENST00000596900 C9orf92A6NGG3 77 aa12.68□□□□□ -0.38
SPTBN4-210ENST00000596900 H0Y9P7 68 aa12.68□□□□□ -0.38
SPTBN4-210ENST00000596900 J3QL48 77 aa12.66□□□□□ -0.38
SPTBN4-210ENST00000596900 H3BPC8 53 aa12.65□□□□□ -0.38
SPTBN4-210ENST00000596900 SNURFQ9Y675 71 aa12.65□□□□□ -0.38
SPTBN4-210ENST00000596900 A0A0U1RQV1 116 aa12.65□□□□□ -0.38
SPTBN4-210ENST00000596900 IGLV7-46A0A075B6I9 117 aa12.64□□□□□ -0.39
SPTBN4-210ENST00000596900 ABCA13Q86UQ4 5058 aa12.62□□□□□ -0.39
SPTBN4-210ENST00000596900 LINC00208Q96KT6 92 aa12.6□□□□□ -0.39
SPTBN4-210ENST00000596900 NDUFC1O43677 76 aa12.59□□□□□ -0.39
SPTBN4-210ENST00000596900 PRR4Q16378 134 aa12.57□□□□□ -0.4
SPTBN4-210ENST00000596900 C20orf166-AS1Q96NR2 134 aa12.57□□□□□ -0.4
SPTBN4-210ENST00000596900 CYSTM1Q9H1C7 97 aa12.57□□□□□ -0.4
SPTBN4-210ENST00000596900 C1orf64Q8NEQ6 169 aa12.55□□□□□ -0.4
SPTBN4-210ENST00000596900 ZCCHC13Q8WW36 166 aaKnown RBP12.55□□□□□ -0.4
SPTBN4-210ENST00000596900 A8MUU9 505 aa12.54□□□□□ -0.4
SPTBN4-210ENST00000596900 Q5W150 140 aa12.54□□□□□ -0.4
SPTBN4-210ENST00000596900 KRTAP13-3Q3SY46 172 aa12.52□□□□□ -0.41
SPTBN4-210ENST00000596900 H7BZZ5 65 aa12.49□□□□□ -0.41
SPTBN4-210ENST00000596900 LOC101927531A0A1B0GV80 90 aa12.48□□□□□ -0.41
SPTBN4-210ENST00000596900 Q75L30 129 aa12.48□□□□□ -0.41
SPTBN4-210ENST00000596900 TMEM258P61165 79 aa12.46□□□□□ -0.42
SPTBN4-210ENST00000596900 TPRXLQ17RH7 258 aa12.44□□□□□ -0.42
SPTBN4-210ENST00000596900 XP32Q5T750 250 aa12.4□□□□□ -0.42
SPTBN4-210ENST00000596900 IGKV2-30P06310 120 aa12.36□□□□□ -0.43
SPTBN4-210ENST00000596900 RPL37P61927 97 aaKnown RBP12.36□□□□□ -0.43
SPTBN4-210ENST00000596900 CYP4F30PQ9H0H9 118 aa12.35□□□□□ -0.43
SPTBN4-210ENST00000596900 ATP11AUNQ6ZP68 121 aa12.34□□□□□ -0.43
SPTBN4-210ENST00000596900 FAM236DA0A1B0GTK5 79 aa12.32□□□□□ -0.44
SPTBN4-210ENST00000596900 FAM236CP0DP71 79 aa12.32□□□□□ -0.44
SPTBN4-210ENST00000596900 PCOTHQ58A44 107 aa12.32□□□□□ -0.44
SPTBN4-210ENST00000596900 ATP5EP56381 51 aaPredicted RBP12.31□□□□□ -0.44
SPTBN4-210ENST00000596900 IGKV2D-30A0A075B6S6 120 aa12.3□□□□□ -0.44
SPTBN4-210ENST00000596900 C7orf65Q6ZTY9 151 aa12.29□□□□□ -0.44
SPTBN4-210ENST00000596900 SPANXA2-OT1Q8N9U9 137 aa12.27□□□□□ -0.45
SPTBN4-210ENST00000596900 PCLOQ9Y6V0 5065 aa12.23□□□□□ -0.45
SPTBN4-210ENST00000596900 HRES1P13985 223 aa12.14□□□□□ -0.47
SPTBN4-210ENST00000596900 SPINK7P58062 85 aa12.14□□□□□ -0.47
SPTBN4-210ENST00000596900 LPAP08519 4548 aa12.07□□□□□ -0.48
SPTBN4-210ENST00000596900 SERP1Q9Y6X1 66 aa12.05□□□□□ -0.48
SPTBN4-210ENST00000596900 SEC61BP60468 96 aaKnown RBP12.04□□□□□ -0.48
SPTBN4-210ENST00000596900 LRP2P98164 4655 aa12.01□□□□□ -0.49
SPTBN4-210ENST00000596900 RPS28P62857 69 aaKnown RBP12.01□□□□□ -0.49
SPTBN4-210ENST00000596900 DMAC1Q96GE9 116 aa11.98□□□□□ -0.49
SPTBN4-210ENST00000596900 C4orf26Q17RF5 130 aa11.96□□□□□ -0.49
SPTBN4-210ENST00000596900 ACYP2P14621 99 aa11.94□□□□□ -0.5
SPTBN4-210ENST00000596900 HERC1Q15751 4861 aa11.92□□□□□ -0.5
SPTBN4-210ENST00000596900 A8MUN3 132 aa11.91□□□□□ -0.5
SPTBN4-210ENST00000596900 COA5Q86WW8 74 aa11.87□□□□□ -0.51
SPTBN4-210ENST00000596900 COX6B2Q6YFQ2 88 aa11.85□□□□□ -0.51
SPTBN4-210ENST00000596900 HMCN2Q8NDA2 5059 aa11.8□□□□□ -0.52
SPTBN4-210ENST00000596900 CHKB-CPT1BH3BT56 60 aa11.77□□□□□ -0.53
SPTBN4-210ENST00000596900 KRTAP3-1Q9BYR8 98 aa11.74□□□□□ -0.53
SPTBN4-210ENST00000596900 SMIM26A0A096LP01 95 aa11.74□□□□□ -0.53
SPTBN4-210ENST00000596900 RBM12B-AS1Q9P1G2 102 aa11.74□□□□□ -0.53
SPTBN4-210ENST00000596900 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
SPTBN4-210ENST00000596900 MUC17Q685J3 4493 aa11.68□□□□□ -0.54
SPTBN4-210ENST00000596900 KRTAP4-1Q9BYQ7 146 aa11.63□□□□□ -0.55
SPTBN4-210ENST00000596900 H1FX-AS1Q4G0G2 97 aa11.57□□□□□ -0.56
SPTBN4-210ENST00000596900 SPTSSBQ8NFR3 76 aa11.57□□□□□ -0.56
SPTBN4-210ENST00000596900 V9GYY9 64 aa11.53□□□□□ -0.56
SPTBN4-210ENST00000596900 Q1T7F1 81 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms