RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 A0A1B0GVX0 72 aa5.12□□□□□ -1.59
PNKP-208ENST00000596624 CCKP06307 115 aa5.12□□□□□ -1.59
PNKP-208ENST00000596624 UBE2V1Q13404 147 aa5.12□□□□□ -1.59
PNKP-208ENST00000596624 DEFB116Q30KQ4 102 aa5.12□□□□□ -1.59
PNKP-208ENST00000596624 SPATA45Q537H7 98 aa5.12□□□□□ -1.59
PNKP-208ENST00000596624 MTURNQ8N3F0 131 aa5.12□□□□□ -1.59
PNKP-208ENST00000596624 TRACP01848 142 aa5.11□□□□□ -1.59
PNKP-208ENST00000596624 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
PNKP-208ENST00000596624 LINC00846Q9NV44 126 aa5.11□□□□□ -1.59
PNKP-208ENST00000596624 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
PNKP-208ENST00000596624 M0R143 59 aa5.1□□□□□ -1.59
PNKP-208ENST00000596624 DNAL4O96015 105 aa5.1□□□□□ -1.59
PNKP-208ENST00000596624 SPINK7P58062 85 aa5.1□□□□□ -1.59
PNKP-208ENST00000596624 Q8N9P0 234 aaPredicted RBP5.1□□□□□ -1.59
PNKP-208ENST00000596624 A8MWP4 228 aa5.08□□□□□ -1.6
PNKP-208ENST00000596624 VAMP8Q9BV40 100 aa5.08□□□□□ -1.6
PNKP-208ENST00000596624 J3KT08 172 aa5.06□□□□□ -1.6
PNKP-208ENST00000596624 C21orf62-AS1Q17RA5 79 aa5.06□□□□□ -1.6
PNKP-208ENST00000596624 A0A1B0GV72 72 aa5.05□□□□□ -1.6
PNKP-208ENST00000596624 COX6CP09669 75 aa5.05□□□□□ -1.6
PNKP-208ENST00000596624 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
PNKP-208ENST00000596624 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
PNKP-208ENST00000596624 HSD52Q0P140 79 aa5.04□□□□□ -1.6
PNKP-208ENST00000596624 A0A1B0GV90 55 aa5.03□□□□□ -1.6
PNKP-208ENST00000596624 PSMB2P49721 201 aa5.03□□□□□ -1.6
PNKP-208ENST00000596624 Q6ZQT0 140 aa5.03□□□□□ -1.6
PNKP-208ENST00000596624 K7ERJ3 54 aa5.02□□□□□ -1.61
PNKP-208ENST00000596624 COL5A1-AS1Q5SY13 56 aa5.02□□□□□ -1.61
PNKP-208ENST00000596624 DSCR8Q96T75 97 aa5.01□□□□□ -1.61
PNKP-208ENST00000596624 A0A1B0GW54 56 aa5□□□□□ -1.61
PNKP-208ENST00000596624 WFDC13Q8IUB5 93 aa5□□□□□ -1.61
PNKP-208ENST00000596624 UQCR10Q9UDW1 63 aa5□□□□□ -1.61
PNKP-208ENST00000596624 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
PNKP-208ENST00000596624 C9JAW5 83 aa4.98□□□□□ -1.61
PNKP-208ENST00000596624 NDUFB1O75438 58 aa4.98□□□□□ -1.61
PNKP-208ENST00000596624 VPS25Q9BRG1 176 aa4.98□□□□□ -1.61
PNKP-208ENST00000596624 IGKV3D-7A0A0C4DH55 119 aa4.97□□□□□ -1.61
PNKP-208ENST00000596624 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.62
PNKP-208ENST00000596624 LOC110117498A0A087WWA1 95 aa4.95□□□□□ -1.62
PNKP-208ENST00000596624 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
PNKP-208ENST00000596624 Q6ZVQ6 151 aa4.95□□□□□ -1.62
PNKP-208ENST00000596624 PRR15Q8IV56 129 aa4.93□□□□□ -1.62
PNKP-208ENST00000596624 JMJD7-PLA2G4BH0Y9G9 81 aa4.92□□□□□ -1.62
PNKP-208ENST00000596624 SCGB1C2P0DMR2 95 aa4.92□□□□□ -1.62
PNKP-208ENST00000596624 PDE6GP18545 87 aa4.92□□□□□ -1.62
PNKP-208ENST00000596624 TMEM254Q8TBM7 123 aa4.91□□□□□ -1.62
PNKP-208ENST00000596624 NEBP20929 6669 aa4.91□□□□□ -1.62
PNKP-208ENST00000596624 MMP24-AS1A0A0U1RRL7 71 aa4.9□□□□□ -1.63
PNKP-208ENST00000596624 LYRM7Q5U5X0 104 aa4.9□□□□□ -1.63
PNKP-208ENST00000596624 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
PNKP-208ENST00000596624 K7ERU9 68 aa4.89□□□□□ -1.63
PNKP-208ENST00000596624 PCP4P48539 62 aa4.89□□□□□ -1.63
PNKP-208ENST00000596624 ATXN8Q156A1 80 aa4.86□□□□□ -1.63
PNKP-208ENST00000596624 GTF2H5Q6ZYL4 71 aa4.86□□□□□ -1.63
PNKP-208ENST00000596624 hDV103S1A0JD37 113 aa4.84□□□□□ -1.63
PNKP-208ENST00000596624 BATFQ16520 125 aa4.84□□□□□ -1.63
PNKP-208ENST00000596624 NREPQ16612 68 aa4.84□□□□□ -1.63
PNKP-208ENST00000596624 C14orf132Q9NPU4 83 aa4.84□□□□□ -1.63
PNKP-208ENST00000596624 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
PNKP-208ENST00000596624 MT1BP07438 61 aa4.83□□□□□ -1.64
PNKP-208ENST00000596624 Q5W150 140 aa4.83□□□□□ -1.64
PNKP-208ENST00000596624 K7EQZ3 153 aa4.82□□□□□ -1.64
PNKP-208ENST00000596624 SCGB1A1P11684 91 aa4.82□□□□□ -1.64
PNKP-208ENST00000596624 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
PNKP-208ENST00000596624 C7orf65Q6ZTY9 151 aa4.82□□□□□ -1.64
PNKP-208ENST00000596624 J3QR89 54 aa4.81□□□□□ -1.64
PNKP-208ENST00000596624 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
PNKP-208ENST00000596624 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
PNKP-208ENST00000596624 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
PNKP-208ENST00000596624 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
PNKP-208ENST00000596624 A6NN06 94 aa4.78□□□□□ -1.64
PNKP-208ENST00000596624 TAX1BP3O14907 124 aa4.78□□□□□ -1.64
PNKP-208ENST00000596624 NDUFS5O43920 106 aa4.77□□□□□ -1.65
PNKP-208ENST00000596624 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
PNKP-208ENST00000596624 NAA38Q9BRA0 125 aaKnown RBP4.77□□□□□ -1.65
PNKP-208ENST00000596624 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
PNKP-208ENST00000596624 F8W1H4 67 aa4.76□□□□□ -1.65
PNKP-208ENST00000596624 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
PNKP-208ENST00000596624 C4orf26Q17RF5 130 aa4.76□□□□□ -1.65
PNKP-208ENST00000596624 Q5VV11 94 aa4.75□□□□□ -1.65
PNKP-208ENST00000596624 K7EP34 96 aa4.74□□□□□ -1.65
PNKP-208ENST00000596624 BPY2O14599 106 aa4.73□□□□□ -1.65
PNKP-208ENST00000596624 H3BT86 120 aa4.72□□□□□ -1.65
PNKP-208ENST00000596624 CXCL6P80162 114 aa4.72□□□□□ -1.65
PNKP-208ENST00000596624 C5orf47Q569G3 176 aa4.72□□□□□ -1.65
PNKP-208ENST00000596624 A0A1W2PPM0 123 aa4.71□□□□□ -1.66
PNKP-208ENST00000596624 HCG22E2RYF7 251 aa4.71□□□□□ -1.66
PNKP-208ENST00000596624 CASC2Q6XLA1 102 aa4.71□□□□□ -1.66
PNKP-208ENST00000596624 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
PNKP-208ENST00000596624 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
PNKP-208ENST00000596624 SPCS1Q9Y6A9 102 aa4.69□□□□□ -1.66
PNKP-208ENST00000596624 KMT2DO14686 5537 aa4.68□□□□□ -1.66
PNKP-208ENST00000596624 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
PNKP-208ENST00000596624 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
PNKP-208ENST00000596624 Q8N9L7 120 aa4.68□□□□□ -1.66
PNKP-208ENST00000596624 S4R3F8 94 aa4.68□□□□□ -1.66
PNKP-208ENST00000596624 KLKP1Q107X0 134 aa4.67□□□□□ -1.66
PNKP-208ENST00000596624 LCA10Q71F78 164 aa4.67□□□□□ -1.66
PNKP-208ENST00000596624 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
PNKP-208ENST00000596624 C1orf64Q8NEQ6 169 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms