RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CCKP06307 115 aa5.81□□□□□ -1.48
LIG1-210ENST00000596332 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
LIG1-210ENST00000596332 C14orf132Q9NPU4 83 aa5.8□□□□□ -1.48
LIG1-210ENST00000596332 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
LIG1-210ENST00000596332 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
LIG1-210ENST00000596332 ATOX1O00244 68 aa5.79□□□□□ -1.48
LIG1-210ENST00000596332 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
LIG1-210ENST00000596332 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
LIG1-210ENST00000596332 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
LIG1-210ENST00000596332 UQCRQO14949 82 aa5.78□□□□□ -1.48
LIG1-210ENST00000596332 DSCR8Q96T75 97 aa5.78□□□□□ -1.48
LIG1-210ENST00000596332 XP32Q5T750 250 aa5.77□□□□□ -1.49
LIG1-210ENST00000596332 PDE6GP18545 87 aa5.76□□□□□ -1.49
LIG1-210ENST00000596332 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
LIG1-210ENST00000596332 SS18L2Q9UHA2 77 aa5.75□□□□□ -1.49
LIG1-210ENST00000596332 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
LIG1-210ENST00000596332 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
LIG1-210ENST00000596332 COX7CP15954 63 aa5.73□□□□□ -1.49
LIG1-210ENST00000596332 DEFB116Q30KQ4 102 aa5.73□□□□□ -1.49
LIG1-210ENST00000596332 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
LIG1-210ENST00000596332 A0A1B0GW54 56 aa5.72□□□□□ -1.49
LIG1-210ENST00000596332 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
LIG1-210ENST00000596332 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
LIG1-210ENST00000596332 MUC2Q02817 5179 aa5.71□□□□□ -1.49
LIG1-210ENST00000596332 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
LIG1-210ENST00000596332 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
LIG1-210ENST00000596332 IGKV3D-7A0A0C4DH55 119 aa5.68□□□□□ -1.5
LIG1-210ENST00000596332 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
LIG1-210ENST00000596332 IGKV4-1P06312 121 aa5.68□□□□□ -1.5
LIG1-210ENST00000596332 SMIM20Q8N5G0 67 aa5.68□□□□□ -1.5
LIG1-210ENST00000596332 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
LIG1-210ENST00000596332 DSCR10P59022 87 aa5.65□□□□□ -1.5
LIG1-210ENST00000596332 TMEM258P61165 79 aa5.64□□□□□ -1.51
LIG1-210ENST00000596332 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
LIG1-210ENST00000596332 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
LIG1-210ENST00000596332 A8MUU9 505 aa5.63□□□□□ -1.51
LIG1-210ENST00000596332 CXCL6P80162 114 aa5.63□□□□□ -1.51
LIG1-210ENST00000596332 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
LIG1-210ENST00000596332 A0A1B0GVX0 72 aa5.62□□□□□ -1.51
LIG1-210ENST00000596332 J3KT08 172 aa5.62□□□□□ -1.51
LIG1-210ENST00000596332 NREPQ16612 68 aa5.62□□□□□ -1.51
LIG1-210ENST00000596332 PCOTHQ58A44 107 aa5.62□□□□□ -1.51
LIG1-210ENST00000596332 Q6ZVQ6 151 aa5.62□□□□□ -1.51
LIG1-210ENST00000596332 LINC00313P59037 77 aa5.61□□□□□ -1.51
LIG1-210ENST00000596332 Q75L30 129 aa5.61□□□□□ -1.51
LIG1-210ENST00000596332 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
LIG1-210ENST00000596332 A8MWP4 228 aa5.6□□□□□ -1.51
LIG1-210ENST00000596332 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
LIG1-210ENST00000596332 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
LIG1-210ENST00000596332 A0A087WVE0 104 aa5.59□□□□□ -1.51
LIG1-210ENST00000596332 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
LIG1-210ENST00000596332 K7EQZ3 153 aa5.57□□□□□ -1.52
LIG1-210ENST00000596332 KRTAP19-2Q3LHN2 52 aa5.57□□□□□ -1.52
LIG1-210ENST00000596332 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
LIG1-210ENST00000596332 C8orf17Q9NRJ1 99 aa5.56□□□□□ -1.52
LIG1-210ENST00000596332 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
LIG1-210ENST00000596332 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
LIG1-210ENST00000596332 NDUFC1O43677 76 aa5.54□□□□□ -1.52
LIG1-210ENST00000596332 Q8N9L7 120 aa5.54□□□□□ -1.52
LIG1-210ENST00000596332 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
LIG1-210ENST00000596332 BPY2O14599 106 aa5.53□□□□□ -1.52
LIG1-210ENST00000596332 NDUFB1O75438 58 aa5.52□□□□□ -1.53
LIG1-210ENST00000596332 ATP5EP56381 51 aaPredicted RBP5.51□□□□□ -1.53
LIG1-210ENST00000596332 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
LIG1-210ENST00000596332 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
LIG1-210ENST00000596332 FAM236DA0A1B0GTK5 79 aa5.48□□□□□ -1.53
LIG1-210ENST00000596332 FAM236CP0DP71 79 aa5.48□□□□□ -1.53
LIG1-210ENST00000596332 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
LIG1-210ENST00000596332 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
LIG1-210ENST00000596332 MRPL34Q9BQ48 92 aaKnown RBP5.47□□□□□ -1.53
LIG1-210ENST00000596332 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
LIG1-210ENST00000596332 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
LIG1-210ENST00000596332 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
LIG1-210ENST00000596332 H7BZZ5 65 aa5.44□□□□□ -1.54
LIG1-210ENST00000596332 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
LIG1-210ENST00000596332 C5orf47Q569G3 176 aa5.43□□□□□ -1.54
LIG1-210ENST00000596332 Q5W150 140 aa5.43□□□□□ -1.54
LIG1-210ENST00000596332 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
LIG1-210ENST00000596332 CASC2Q6XLA1 102 aa5.42□□□□□ -1.54
LIG1-210ENST00000596332 MPLKIPQ8TAP9 179 aa5.42□□□□□ -1.54
LIG1-210ENST00000596332 HRES1P13985 223 aa5.41□□□□□ -1.54
LIG1-210ENST00000596332 HCG22E2RYF7 251 aa5.4□□□□□ -1.54
LIG1-210ENST00000596332 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
LIG1-210ENST00000596332 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
LIG1-210ENST00000596332 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
LIG1-210ENST00000596332 A0A0U1RQV1 116 aa5.37□□□□□ -1.55
LIG1-210ENST00000596332 MT1HP80294 61 aa5.37□□□□□ -1.55
LIG1-210ENST00000596332 SPINK7P58062 85 aa5.36□□□□□ -1.55
LIG1-210ENST00000596332 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
LIG1-210ENST00000596332 NDUFS5O43920 106 aa5.33□□□□□ -1.56
LIG1-210ENST00000596332 H3BPC8 53 aa5.3□□□□□ -1.56
LIG1-210ENST00000596332 MP68P56378 58 aa5.29□□□□□ -1.56
LIG1-210ENST00000596332 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
LIG1-210ENST00000596332 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
LIG1-210ENST00000596332 TP53AIP1Q9HCN2 124 aa5.26□□□□□ -1.57
LIG1-210ENST00000596332 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
LIG1-210ENST00000596332 IGKV2D-30A0A075B6S6 120 aa5.24□□□□□ -1.57
LIG1-210ENST00000596332 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
LIG1-210ENST00000596332 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
LIG1-210ENST00000596332 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms