RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 IGHV6-1A0A0B4J1U7 121 aa7.69□□□□□ -1.18
LIG1-208ENST00000595758 F8W1H4 67 aa7.69□□□□□ -1.18
LIG1-208ENST00000595758 Q75L30 129 aa7.68□□□□□ -1.18
LIG1-208ENST00000595758 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
LIG1-208ENST00000595758 A0A1B0GVX0 72 aa7.67□□□□□ -1.18
LIG1-208ENST00000595758 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
LIG1-208ENST00000595758 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
LIG1-208ENST00000595758 NDUFB1O75438 58 aa7.65□□□□□ -1.18
LIG1-208ENST00000595758 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
LIG1-208ENST00000595758 A8MUU9 505 aa7.64□□□□□ -1.19
LIG1-208ENST00000595758 C8orf87E5RJ46 101 aa7.64□□□□□ -1.19
LIG1-208ENST00000595758 ATP11AUNQ6ZP68 121 aa7.64□□□□□ -1.19
LIG1-208ENST00000595758 A8MWP4 228 aa7.63□□□□□ -1.19
LIG1-208ENST00000595758 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
LIG1-208ENST00000595758 ETDBQ3ZM63 59 aa7.62□□□□□ -1.19
LIG1-208ENST00000595758 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
LIG1-208ENST00000595758 BPY2O14599 106 aa7.58□□□□□ -1.2
LIG1-208ENST00000595758 Q6ZVQ6 151 aa7.58□□□□□ -1.2
LIG1-208ENST00000595758 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
LIG1-208ENST00000595758 PRR15Q8IV56 129 aa7.57□□□□□ -1.2
LIG1-208ENST00000595758 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
LIG1-208ENST00000595758 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
LIG1-208ENST00000595758 UBL5Q9BZL1 73 aa7.55□□□□□ -1.2
LIG1-208ENST00000595758 A0A1B0GV90 55 aa7.54□□□□□ -1.2
LIG1-208ENST00000595758 K7EQZ3 153 aa7.52□□□□□ -1.21
LIG1-208ENST00000595758 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
LIG1-208ENST00000595758 Q8N9P0 234 aaPredicted RBP7.49□□□□□ -1.21
LIG1-208ENST00000595758 Q8N9L7 120 aa7.47□□□□□ -1.21
LIG1-208ENST00000595758 TMEM254Q8TBM7 123 aa7.46□□□□□ -1.22
LIG1-208ENST00000595758 hDV103S1A0JD37 113 aa7.45□□□□□ -1.22
LIG1-208ENST00000595758 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
LIG1-208ENST00000595758 MRPL34Q9BQ48 92 aaKnown RBP7.45□□□□□ -1.22
LIG1-208ENST00000595758 ACYP1P07311 99 aa7.44□□□□□ -1.22
LIG1-208ENST00000595758 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
LIG1-208ENST00000595758 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
LIG1-208ENST00000595758 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
LIG1-208ENST00000595758 FAM240AA0A1B0GVK7 77 aa7.41□□□□□ -1.22
LIG1-208ENST00000595758 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
LIG1-208ENST00000595758 CXCL6P80162 114 aa7.4□□□□□ -1.22
LIG1-208ENST00000595758 CASC2Q6XLA1 102 aa7.4□□□□□ -1.22
LIG1-208ENST00000595758 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.22
LIG1-208ENST00000595758 NDUFS5O43920 106 aa7.39□□□□□ -1.23
LIG1-208ENST00000595758 HCG22E2RYF7 251 aa7.36□□□□□ -1.23
LIG1-208ENST00000595758 SPINK7P58062 85 aa7.34□□□□□ -1.23
LIG1-208ENST00000595758 MT1HP80294 61 aa7.32□□□□□ -1.24
LIG1-208ENST00000595758 HRES1P13985 223 aa7.31□□□□□ -1.24
LIG1-208ENST00000595758 ATP5EP2Q5VTU8 51 aa7.31□□□□□ -1.24
LIG1-208ENST00000595758 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
LIG1-208ENST00000595758 J3QR89 54 aa7.28□□□□□ -1.24
LIG1-208ENST00000595758 Q5W150 140 aa7.28□□□□□ -1.24
LIG1-208ENST00000595758 MPLKIPQ8TAP9 179 aa7.28□□□□□ -1.24
LIG1-208ENST00000595758 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
LIG1-208ENST00000595758 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
LIG1-208ENST00000595758 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
LIG1-208ENST00000595758 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
LIG1-208ENST00000595758 M0R2T5 61 aa7.24□□□□□ -1.25
LIG1-208ENST00000595758 HIST1H4AP62805 103 aaKnown RBP7.24□□□□□ -1.25
LIG1-208ENST00000595758 IGKV2D-30A0A075B6S6 120 aa7.22□□□□□ -1.25
LIG1-208ENST00000595758 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
LIG1-208ENST00000595758 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
LIG1-208ENST00000595758 C7orf65Q6ZTY9 151 aa7.19□□□□□ -1.26
LIG1-208ENST00000595758 A0A087WVE0 104 aa7.15□□□□□ -1.26
LIG1-208ENST00000595758 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
LIG1-208ENST00000595758 K7ERU9 68 aa7.12□□□□□ -1.27
LIG1-208ENST00000595758 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
LIG1-208ENST00000595758 UQCRQO14949 82 aa7.08□□□□□ -1.28
LIG1-208ENST00000595758 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
LIG1-208ENST00000595758 C4orf26Q17RF5 130 aa7.06□□□□□ -1.28
LIG1-208ENST00000595758 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
LIG1-208ENST00000595758 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.29
LIG1-208ENST00000595758 H0Y9P7 68 aa7.02□□□□□ -1.29
LIG1-208ENST00000595758 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
LIG1-208ENST00000595758 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
LIG1-208ENST00000595758 ATOX1O00244 68 aa7.01□□□□□ -1.29
LIG1-208ENST00000595758 OCR1Q9BZK8 76 aa7□□□□□ -1.29
LIG1-208ENST00000595758 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
LIG1-208ENST00000595758 IMUPQ9GZP8 106 aa6.99□□□□□ -1.29
LIG1-208ENST00000595758 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
LIG1-208ENST00000595758 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
LIG1-208ENST00000595758 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
LIG1-208ENST00000595758 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
LIG1-208ENST00000595758 MP68P56378 58 aa6.95□□□□□ -1.3
LIG1-208ENST00000595758 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
LIG1-208ENST00000595758 C5orf47Q569G3 176 aa6.93□□□□□ -1.3
LIG1-208ENST00000595758 LINC00208Q96KT6 92 aa6.93□□□□□ -1.3
LIG1-208ENST00000595758 MT2AP02795 61 aa6.9□□□□□ -1.3
LIG1-208ENST00000595758 FAM236AA0A1B0GUQ0 79 aa6.87□□□□□ -1.31
LIG1-208ENST00000595758 FAM236BA0A1B0GV22 79 aa6.87□□□□□ -1.31
LIG1-208ENST00000595758 H3BPC8 53 aa6.86□□□□□ -1.31
LIG1-208ENST00000595758 S4R3F8 94 aa6.86□□□□□ -1.31
LIG1-208ENST00000595758 MT1FP04733 61 aa6.84□□□□□ -1.31
LIG1-208ENST00000595758 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
LIG1-208ENST00000595758 KLKP1Q107X0 134 aa6.84□□□□□ -1.31
LIG1-208ENST00000595758 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
LIG1-208ENST00000595758 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
LIG1-208ENST00000595758 LCA10Q71F78 164 aa6.81□□□□□ -1.32
LIG1-208ENST00000595758 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
LIG1-208ENST00000595758 A8MUN3 132 aa6.77□□□□□ -1.33
LIG1-208ENST00000595758 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
LIG1-208ENST00000595758 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms