RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 NOTCH2NLQ7Z3S9 236 aa12.2□□□□□ -0.46
SNRNP70-204ENST00000595231 A8MWP4 228 aa12.19□□□□□ -0.46
SNRNP70-204ENST00000595231 MUC17Q685J3 4493 aa12.19□□□□□ -0.46
SNRNP70-204ENST00000595231 LINC00313P59037 77 aa12.19□□□□□ -0.46
SNRNP70-204ENST00000595231 UBL5Q9BZL1 73 aa12.18□□□□□ -0.46
SNRNP70-204ENST00000595231 IGKV3D-7A0A0C4DH55 119 aa12.17□□□□□ -0.46
SNRNP70-204ENST00000595231 RNF213Q63HN8 5207 aa12.16□□□□□ -0.46
SNRNP70-204ENST00000595231 BPY2O14599 106 aa12.16□□□□□ -0.46
SNRNP70-204ENST00000595231 NDUFB1O75438 58 aa12.16□□□□□ -0.46
SNRNP70-204ENST00000595231 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
SNRNP70-204ENST00000595231 KRTAP16-1A8MUX0 517 aa12.13□□□□□ -0.47
SNRNP70-204ENST00000595231 ACYP1P07311 99 aa12.13□□□□□ -0.47
SNRNP70-204ENST00000595231 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
SNRNP70-204ENST00000595231 C8orf87E5RJ46 101 aa12.12□□□□□ -0.47
SNRNP70-204ENST00000595231 RPL37P61927 97 aaKnown RBP12.12□□□□□ -0.47
SNRNP70-204ENST00000595231 SEC61BP60468 96 aaKnown RBP12.1□□□□□ -0.47
SNRNP70-204ENST00000595231 K7EQZ3 153 aa12.1□□□□□ -0.47
SNRNP70-204ENST00000595231 MUC2Q02817 5179 aa12.09□□□□□ -0.47
SNRNP70-204ENST00000595231 Q75L30 129 aa12.09□□□□□ -0.47
SNRNP70-204ENST00000595231 C20orf166-AS1Q96NR2 134 aa12.09□□□□□ -0.47
SNRNP70-204ENST00000595231 A8MUU9 505 aa12.06□□□□□ -0.48
SNRNP70-204ENST00000595231 C8orf17Q9NRJ1 99 aa12.06□□□□□ -0.48
SNRNP70-204ENST00000595231 Q8N9L7 120 aa12.04□□□□□ -0.48
SNRNP70-204ENST00000595231 PCOTHQ58A44 107 aa12.03□□□□□ -0.48
SNRNP70-204ENST00000595231 MMP24-AS1A0A0U1RRL7 71 aa12□□□□□ -0.49
SNRNP70-204ENST00000595231 CXCL6P80162 114 aa11.99□□□□□ -0.49
SNRNP70-204ENST00000595231 KRTAP4-1Q9BYQ7 146 aa11.98□□□□□ -0.49
SNRNP70-204ENST00000595231 J3QR89 54 aa11.96□□□□□ -0.5
SNRNP70-204ENST00000595231 ATP11AUNQ6ZP68 121 aa11.94□□□□□ -0.5
SNRNP70-204ENST00000595231 Q8N9P0 234 aaPredicted RBP11.94□□□□□ -0.5
SNRNP70-204ENST00000595231 hDV103S1A0JD37 113 aa11.91□□□□□ -0.5
SNRNP70-204ENST00000595231 TMEM254Q8TBM7 123 aa11.91□□□□□ -0.5
SNRNP70-204ENST00000595231 MRPL34Q9BQ48 92 aaKnown RBP11.89□□□□□ -0.51
SNRNP70-204ENST00000595231 K7ERU9 68 aa11.87□□□□□ -0.51
SNRNP70-204ENST00000595231 LINC00643Q86TS7 51 aa11.87□□□□□ -0.51
SNRNP70-204ENST00000595231 ATP5EP2Q5VTU8 51 aa11.87□□□□□ -0.51
SNRNP70-204ENST00000595231 WFDC13Q8IUB5 93 aa11.87□□□□□ -0.51
SNRNP70-204ENST00000595231 CASC2Q6XLA1 102 aa11.85□□□□□ -0.51
SNRNP70-204ENST00000595231 HCG22E2RYF7 251 aa11.84□□□□□ -0.51
SNRNP70-204ENST00000595231 ZCCHC13Q8WW36 166 aaKnown RBP11.78□□□□□ -0.52
SNRNP70-204ENST00000595231 NDUFS5O43920 106 aa11.75□□□□□ -0.53
SNRNP70-204ENST00000595231 HIST1H4AP62805 103 aaKnown RBP11.74□□□□□ -0.53
SNRNP70-204ENST00000595231 A0A087WVE0 104 aa11.67□□□□□ -0.54
SNRNP70-204ENST00000595231 Q5W150 140 aa11.65□□□□□ -0.54
SNRNP70-204ENST00000595231 FAT4Q6V0I7 4981 aa11.65□□□□□ -0.54
SNRNP70-204ENST00000595231 KRTAP19-2Q3LHN2 52 aa11.62□□□□□ -0.55
SNRNP70-204ENST00000595231 A0A0U1RQV1 116 aa11.6□□□□□ -0.55
SNRNP70-204ENST00000595231 SPINK7P58062 85 aa11.58□□□□□ -0.56
SNRNP70-204ENST00000595231 TP53AIP1Q9HCN2 124 aa11.57□□□□□ -0.56
SNRNP70-204ENST00000595231 MT-ATP8P03928 68 aa11.56□□□□□ -0.56
SNRNP70-204ENST00000595231 LCE2CQ5TA81 110 aa11.55□□□□□ -0.56
SNRNP70-204ENST00000595231 HRES1P13985 223 aa11.52□□□□□ -0.56
SNRNP70-204ENST00000595231 IMUPQ9GZP8 106 aa11.51□□□□□ -0.57
SNRNP70-204ENST00000595231 MPLKIPQ8TAP9 179 aa11.49□□□□□ -0.57
SNRNP70-204ENST00000595231 IGKV2D-30A0A075B6S6 120 aa11.44□□□□□ -0.58
SNRNP70-204ENST00000595231 IGKV2-30P06310 120 aa11.44□□□□□ -0.58
SNRNP70-204ENST00000595231 C7orf65Q6ZTY9 151 aa11.42□□□□□ -0.58
SNRNP70-204ENST00000595231 LCE2AQ5TA79 106 aaPredicted RBP11.41□□□□□ -0.58
SNRNP70-204ENST00000595231 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
SNRNP70-204ENST00000595231 UQCRQO14949 82 aa11.4□□□□□ -0.58
SNRNP70-204ENST00000595231 OCR1Q9BZK8 76 aa11.4□□□□□ -0.59
SNRNP70-204ENST00000595231 TRAV22A0A0B4J277 110 aa11.39□□□□□ -0.59
SNRNP70-204ENST00000595231 RBM12B-AS1Q9P1G2 102 aa11.37□□□□□ -0.59
SNRNP70-204ENST00000595231 FLGP20930 4061 aaPredicted RBP11.34□□□□□ -0.59
SNRNP70-204ENST00000595231 MT1HP80294 61 aa11.33□□□□□ -0.6
SNRNP70-204ENST00000595231 SCGB1A1P11684 91 aa11.33□□□□□ -0.6
SNRNP70-204ENST00000595231 FAM236AA0A1B0GUQ0 79 aa11.3□□□□□ -0.6
SNRNP70-204ENST00000595231 FAM236BA0A1B0GV22 79 aa11.3□□□□□ -0.6
SNRNP70-204ENST00000595231 H0Y9P7 68 aa11.3□□□□□ -0.6
SNRNP70-204ENST00000595231 FAM236DA0A1B0GTK5 79 aa11.29□□□□□ -0.6
SNRNP70-204ENST00000595231 FAM236CP0DP71 79 aa11.29□□□□□ -0.6
SNRNP70-204ENST00000595231 ATOX1O00244 68 aa11.27□□□□□ -0.61
SNRNP70-204ENST00000595231 CYP4F30PQ9H0H9 118 aa11.27□□□□□ -0.61
SNRNP70-204ENST00000595231 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
SNRNP70-204ENST00000595231 C5orf47Q569G3 176 aa11.22□□□□□ -0.61
SNRNP70-204ENST00000595231 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
SNRNP70-204ENST00000595231 C1orf64Q8NEQ6 169 aa11.19□□□□□ -0.62
SNRNP70-204ENST00000595231 MP68P56378 58 aa11.18□□□□□ -0.62
SNRNP70-204ENST00000595231 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
SNRNP70-204ENST00000595231 SMIM20Q8N5G0 67 aa11.15□□□□□ -0.62
SNRNP70-204ENST00000595231 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
SNRNP70-204ENST00000595231 M0R2T5 61 aa11.11□□□□□ -0.63
SNRNP70-204ENST00000595231 H3BPC8 53 aa11.11□□□□□ -0.63
SNRNP70-204ENST00000595231 KRTAP3-1Q9BYR8 98 aa11.11□□□□□ -0.63
SNRNP70-204ENST00000595231 H1FX-AS1Q4G0G2 97 aa11.09□□□□□ -0.63
SNRNP70-204ENST00000595231 KLKP1Q107X0 134 aa11.07□□□□□ -0.64
SNRNP70-204ENST00000595231 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
SNRNP70-204ENST00000595231 LORP23490 312 aaPredicted RBP11□□□□□ -0.65
SNRNP70-204ENST00000595231 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
SNRNP70-204ENST00000595231 SNURFQ9Y675 71 aa10.87□□□□□ -0.67
SNRNP70-204ENST00000595231 ANAPC13Q9BS18 74 aa10.86□□□□□ -0.67
SNRNP70-204ENST00000595231 C20orf197Q8N268 126 aa10.85□□□□□ -0.67
SNRNP70-204ENST00000595231 KRTAP9-8Q9BYQ0 159 aa10.84□□□□□ -0.67
SNRNP70-204ENST00000595231 S4R3F8 94 aa10.83□□□□□ -0.68
SNRNP70-204ENST00000595231 A8MUN3 132 aa10.82□□□□□ -0.68
SNRNP70-204ENST00000595231 COX7CP15954 63 aa10.82□□□□□ -0.68
SNRNP70-204ENST00000595231 LCA10Q71F78 164 aa10.81□□□□□ -0.68
SNRNP70-204ENST00000595231 KRTAP3-3Q9BYR6 98 aa10.76□□□□□ -0.69
SNRNP70-204ENST00000595231 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
SNRNP70-204ENST00000595231 MT2AP02795 61 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms