RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	NOTCH2NL	Q7Z3S9	236 aa		12.24	□□□□□ -0.45
PNKP-205	ENST00000595081		F8W1H4	67 aa		12.23	□□□□□ -0.45
PNKP-205	ENST00000595081	LINC00313	P59037	77 aa		12.23	□□□□□ -0.45
PNKP-205	ENST00000595081	NREP	Q16612	68 aa		12.22	□□□□□ -0.45
PNKP-205	ENST00000595081		Q75L30	129 aa		12.22	□□□□□ -0.45
PNKP-205	ENST00000595081		A0A1B0GVX0	72 aa		12.21	□□□□□ -0.45
PNKP-205	ENST00000595081	C20orf166-AS1	Q96NR2	134 aa		12.18	□□□□□ -0.46
PNKP-205	ENST00000595081	KRTAP16-1	A8MUX0	517 aa		12.17	□□□□□ -0.46
PNKP-205	ENST00000595081		A8MUU9	505 aa		12.16	□□□□□ -0.46
PNKP-205	ENST00000595081	ETDB	Q3ZM63	59 aa		12.16	□□□□□ -0.46
PNKP-205	ENST00000595081		A8MWP4	228 aa		12.14	□□□□□ -0.47
PNKP-205	ENST00000595081	NDUFB1	O75438	58 aa		12.14	□□□□□ -0.47
PNKP-205	ENST00000595081	C8orf87	E5RJ46	101 aa		12.13	□□□□□ -0.47
PNKP-205	ENST00000595081	IGKV3D-7	A0A0C4DH55	119 aa		12.12	□□□□□ -0.47
PNKP-205	ENST00000595081	ATP11AUN	Q6ZP68	121 aa		12.12	□□□□□ -0.47
PNKP-205	ENST00000595081		A0A0U1RQV1	116 aa		12.11	□□□□□ -0.47
PNKP-205	ENST00000595081		Q6ZVQ6	151 aa		12.1	□□□□□ -0.47
PNKP-205	ENST00000595081		A0A1B0GV90	55 aa		12.08	□□□□□ -0.48
PNKP-205	ENST00000595081	LINC00846	Q9NV44	126 aa		12.07	□□□□□ -0.48
PNKP-205	ENST00000595081	FAT4	Q6V0I7	4981 aa		12.05	□□□□□ -0.48
PNKP-205	ENST00000595081	PRR15	Q8IV56	129 aa		12.05	□□□□□ -0.48
PNKP-205	ENST00000595081	C8orf17	Q9NRJ1	99 aa		12.05	□□□□□ -0.48
PNKP-205	ENST00000595081	BPY2	O14599	106 aa		12.04	□□□□□ -0.48
PNKP-205	ENST00000595081		K7EQZ3	153 aa		12.02	□□□□□ -0.49
PNKP-205	ENST00000595081	UBL5	Q9BZL1	73 aa		12	□□□□□ -0.49
PNKP-205	ENST00000595081	MMP24-AS1	A0A0U1RRL7	71 aa		11.95	□□□□□ -0.5
PNKP-205	ENST00000595081		Q8N9L7	120 aa		11.95	□□□□□ -0.5
PNKP-205	ENST00000595081		Q8N9P0	234 aa	Predicted RBP	11.92	□□□□□ -0.5
PNKP-205	ENST00000595081	KRTAP19-2	Q3LHN2	52 aa		11.9	□□□□□ -0.5
PNKP-205	ENST00000595081	TMEM254	Q8TBM7	123 aa		11.88	□□□□□ -0.51
PNKP-205	ENST00000595081	hDV103S1	A0JD37	113 aa		11.86	□□□□□ -0.51
PNKP-205	ENST00000595081	LCE2A	Q5TA79	106 aa	Predicted RBP	11.86	□□□□□ -0.51
PNKP-205	ENST00000595081	LCE2C	Q5TA81	110 aa		11.86	□□□□□ -0.51
PNKP-205	ENST00000595081	MRPL34	Q9BQ48	92 aa	Known RBP	11.86	□□□□□ -0.51
PNKP-205	ENST00000595081	ZCCHC13	Q8WW36	166 aa	Known RBP	11.85	□□□□□ -0.51
PNKP-205	ENST00000595081	WFDC13	Q8IUB5	93 aa		11.82	□□□□□ -0.52
PNKP-205	ENST00000595081	ACYP1	P07311	99 aa		11.8	□□□□□ -0.52
PNKP-205	ENST00000595081	FAM240A	A0A1B0GVK7	77 aa		11.79	□□□□□ -0.52
PNKP-205	ENST00000595081	CASC2	Q6XLA1	102 aa		11.78	□□□□□ -0.52
PNKP-205	ENST00000595081	NDUFS5	O43920	106 aa		11.77	□□□□□ -0.53
PNKP-205	ENST00000595081	CXCL6	P80162	114 aa		11.77	□□□□□ -0.53
PNKP-205	ENST00000595081	COX6B2	Q6YFQ2	88 aa		11.75	□□□□□ -0.53
PNKP-205	ENST00000595081	HCG22	E2RYF7	251 aa		11.72	□□□□□ -0.53
PNKP-205	ENST00000595081	MT1H	P80294	61 aa		11.68	□□□□□ -0.54
PNKP-205	ENST00000595081	SPINK7	P58062	85 aa		11.67	□□□□□ -0.54
PNKP-205	ENST00000595081	HRES1	P13985	223 aa		11.66	□□□□□ -0.54
PNKP-205	ENST00000595081	ATP5EP2	Q5VTU8	51 aa		11.62	□□□□□ -0.55
PNKP-205	ENST00000595081		Q5W150	140 aa		11.62	□□□□□ -0.55
PNKP-205	ENST00000595081	MPLKIP	Q8TAP9	179 aa		11.6	□□□□□ -0.55
PNKP-205	ENST00000595081	FLG	P20930	4061 aa	Predicted RBP	11.59	□□□□□ -0.55
PNKP-205	ENST00000595081	LINC00643	Q86TS7	51 aa		11.57	□□□□□ -0.56
PNKP-205	ENST00000595081		J3QR89	54 aa		11.55	□□□□□ -0.56
PNKP-205	ENST00000595081	RBM12B-AS1	Q9P1G2	102 aa		11.55	□□□□□ -0.56
PNKP-205	ENST00000595081	FAM236D	A0A1B0GTK5	79 aa		11.54	□□□□□ -0.56
PNKP-205	ENST00000595081	FAM236C	P0DP71	79 aa		11.54	□□□□□ -0.56
PNKP-205	ENST00000595081	HIST1H4A	P62805	103 aa	Known RBP	11.53	□□□□□ -0.56
PNKP-205	ENST00000595081	IGKV2D-30	A0A075B6S6	120 aa		11.5	□□□□□ -0.57
PNKP-205	ENST00000595081		M0R2T5	61 aa		11.5	□□□□□ -0.57
PNKP-205	ENST00000595081	IGKV2-30	P06310	120 aa		11.5	□□□□□ -0.57
PNKP-205	ENST00000595081	C7orf65	Q6ZTY9	151 aa		11.45	□□□□□ -0.58
PNKP-205	ENST00000595081	TP53AIP1	Q9HCN2	124 aa		11.45	□□□□□ -0.58
PNKP-205	ENST00000595081		A0A087WVE0	104 aa		11.44	□□□□□ -0.58
PNKP-205	ENST00000595081	KRTAP10-6	P60371	365 aa	Predicted RBP	11.39	□□□□□ -0.59
PNKP-205	ENST00000595081	LOR	P23490	312 aa	Predicted RBP	11.35	□□□□□ -0.59
PNKP-205	ENST00000595081		K7ERU9	68 aa		11.32	□□□□□ -0.6
PNKP-205	ENST00000595081	TRAV22	A0A0B4J277	110 aa		11.27	□□□□□ -0.61
PNKP-205	ENST00000595081	C4orf26	Q17RF5	130 aa		11.26	□□□□□ -0.61
PNKP-205	ENST00000595081	UQCRQ	O14949	82 aa		11.25	□□□□□ -0.61
PNKP-205	ENST00000595081	H1FX-AS1	Q4G0G2	97 aa		11.19	□□□□□ -0.62
PNKP-205	ENST00000595081	KRTAP9-2	Q9BYQ4	174 aa		11.19	□□□□□ -0.62
PNKP-205	ENST00000595081		H0Y9P7	68 aa		11.18	□□□□□ -0.62
PNKP-205	ENST00000595081	MT-ATP8	P03928	68 aa		11.18	□□□□□ -0.62
PNKP-205	ENST00000595081	CYP4F30P	Q9H0H9	118 aa		11.18	□□□□□ -0.62
PNKP-205	ENST00000595081	OCR1	Q9BZK8	76 aa		11.16	□□□□□ -0.62
PNKP-205	ENST00000595081	LOC101927531	A0A1B0GV80	90 aa		11.15	□□□□□ -0.62
PNKP-205	ENST00000595081	ATOX1	O00244	68 aa		11.12	□□□□□ -0.63
PNKP-205	ENST00000595081	KRTAP9-8	Q9BYQ0	159 aa		11.11	□□□□□ -0.63
PNKP-205	ENST00000595081	IMUP	Q9GZP8	106 aa		11.11	□□□□□ -0.63
PNKP-205	ENST00000595081	KRTAP3-1	Q9BYR8	98 aa		11.1	□□□□□ -0.63
PNKP-205	ENST00000595081	SCGB1A1	P11684	91 aa		11.08	□□□□□ -0.64
PNKP-205	ENST00000595081	C1orf64	Q8NEQ6	169 aa		11.08	□□□□□ -0.64
PNKP-205	ENST00000595081	LCE2D	Q5TA82	110 aa	Predicted RBP	11.07	□□□□□ -0.64
PNKP-205	ENST00000595081	LINC00208	Q96KT6	92 aa		11.04	□□□□□ -0.64
PNKP-205	ENST00000595081	MP68	P56378	58 aa		11.02	□□□□□ -0.65
PNKP-205	ENST00000595081	MT2A	P02795	61 aa		11.01	□□□□□ -0.65
PNKP-205	ENST00000595081	C5orf47	Q569G3	176 aa		10.99	□□□□□ -0.65
PNKP-205	ENST00000595081	FAM236A	A0A1B0GUQ0	79 aa		10.97	□□□□□ -0.65
PNKP-205	ENST00000595081	FAM236B	A0A1B0GV22	79 aa		10.97	□□□□□ -0.65
PNKP-205	ENST00000595081	MT1F	P04733	61 aa		10.94	□□□□□ -0.66
PNKP-205	ENST00000595081	KLKP1	Q107X0	134 aa		10.93	□□□□□ -0.66
PNKP-205	ENST00000595081		S4R3F8	94 aa		10.92	□□□□□ -0.66
PNKP-205	ENST00000595081		H3BPC8	53 aa		10.89	□□□□□ -0.67
PNKP-205	ENST00000595081	KRTAP10-10	P60014	251 aa		10.88	□□□□□ -0.67
PNKP-205	ENST00000595081	LCA10	Q71F78	164 aa		10.86	□□□□□ -0.67
PNKP-205	ENST00000595081	TRAV7	A0A075B6U4	112 aa		10.84	□□□□□ -0.67
PNKP-205	ENST00000595081	SMIM20	Q8N5G0	67 aa		10.84	□□□□□ -0.67
PNKP-205	ENST00000595081	KRTAP9-6	A0A140TA67	174 aa		10.8	□□□□□ -0.68
PNKP-205	ENST00000595081	CSAG1	Q6PB30	78 aa		10.76	□□□□□ -0.69
PNKP-205	ENST00000595081	KRTAP9-3	Q9BYQ3	159 aa		10.75	□□□□□ -0.69
PNKP-205	ENST00000595081	KRTAP3-3	Q9BYR6	98 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms