RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 J3KT08 172 aa11.81□□□□□ -0.52
LSM4-204ENST00000594828 KRTAP9-8Q9BYQ0 159 aa11.8□□□□□ -0.52
LSM4-204ENST00000594828 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
LSM4-204ENST00000594828 M0R143 59 aa11.79□□□□□ -0.52
LSM4-204ENST00000594828 HRES1P13985 223 aa11.79□□□□□ -0.52
LSM4-204ENST00000594828 Q6ZQT0 140 aa11.79□□□□□ -0.52
LSM4-204ENST00000594828 ATXN8Q156A1 80 aa11.78□□□□□ -0.52
LSM4-204ENST00000594828 MPLKIPQ8TAP9 179 aa11.78□□□□□ -0.52
LSM4-204ENST00000594828 NAA38Q9BRA0 125 aaKnown RBP11.77□□□□□ -0.53
LSM4-204ENST00000594828 JMJD7-PLA2G4BH0Y9G9 81 aa11.75□□□□□ -0.53
LSM4-204ENST00000594828 NDUFB1O75438 58 aa11.73□□□□□ -0.53
LSM4-204ENST00000594828 LOC110117498A0A087WWA1 95 aa11.7□□□□□ -0.54
LSM4-204ENST00000594828 ZCCHC13Q8WW36 166 aaKnown RBP11.7□□□□□ -0.54
LSM4-204ENST00000594828 A0A1B0GW54 56 aa11.69□□□□□ -0.54
LSM4-204ENST00000594828 PDE6GP18545 87 aa11.67□□□□□ -0.54
LSM4-204ENST00000594828 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
LSM4-204ENST00000594828 A8MWP4 228 aa11.64□□□□□ -0.55
LSM4-204ENST00000594828 MTURNQ8N3F0 131 aa11.64□□□□□ -0.55
LSM4-204ENST00000594828 SPINK7P58062 85 aa11.63□□□□□ -0.55
LSM4-204ENST00000594828 C14orf132Q9NPU4 83 aa11.63□□□□□ -0.55
LSM4-204ENST00000594828 SMIM6P0DI80 62 aa11.62□□□□□ -0.55
LSM4-204ENST00000594828 C8orf17Q9NRJ1 99 aa11.62□□□□□ -0.55
LSM4-204ENST00000594828 MT2AP02795 61 aa11.61□□□□□ -0.55
LSM4-204ENST00000594828 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
LSM4-204ENST00000594828 IGKV3D-7A0A0C4DH55 119 aa11.59□□□□□ -0.55
LSM4-204ENST00000594828 NREPQ16612 68 aa11.55□□□□□ -0.56
LSM4-204ENST00000594828 BATFQ16520 125 aa11.54□□□□□ -0.56
LSM4-204ENST00000594828 Q6ZVQ6 151 aa11.54□□□□□ -0.56
LSM4-204ENST00000594828 TSTD3H0UI37 97 aa11.53□□□□□ -0.56
LSM4-204ENST00000594828 PRR15Q8IV56 129 aa11.53□□□□□ -0.56
LSM4-204ENST00000594828 MT1FP04733 61 aa11.52□□□□□ -0.57
LSM4-204ENST00000594828 USH2AO75445 5202 aa11.49□□□□□ -0.57
LSM4-204ENST00000594828 KRTAP10-10P60014 251 aa11.49□□□□□ -0.57
LSM4-204ENST00000594828 WFDC13Q8IUB5 93 aa11.46□□□□□ -0.57
LSM4-204ENST00000594828 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
LSM4-204ENST00000594828 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
LSM4-204ENST00000594828 H3BT86 120 aa11.43□□□□□ -0.58
LSM4-204ENST00000594828 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
LSM4-204ENST00000594828 MRPL34Q9BQ48 92 aaKnown RBP11.43□□□□□ -0.58
LSM4-204ENST00000594828 KRTAP9-3Q9BYQ3 159 aa11.43□□□□□ -0.58
LSM4-204ENST00000594828 LCE2BO14633 110 aa11.4□□□□□ -0.58
LSM4-204ENST00000594828 SSPOA2VEC9 5147 aa11.39□□□□□ -0.59
LSM4-204ENST00000594828 A0A1W2PPM0 123 aa11.38□□□□□ -0.59
LSM4-204ENST00000594828 TAX1BP3O14907 124 aa11.38□□□□□ -0.59
LSM4-204ENST00000594828 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
LSM4-204ENST00000594828 K7EQZ3 153 aa11.37□□□□□ -0.59
LSM4-204ENST00000594828 NDUFS5O43920 106 aa11.35□□□□□ -0.59
LSM4-204ENST00000594828 BPY2O14599 106 aa11.32□□□□□ -0.6
LSM4-204ENST00000594828 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.31□□□□□ -0.6
LSM4-204ENST00000594828 LOC105371267A0A1B0GV96 52 aa11.29□□□□□ -0.6
LSM4-204ENST00000594828 KRTAP19-1Q8IUB9 90 aa11.26□□□□□ -0.61
LSM4-204ENST00000594828 H1FX-AS1Q4G0G2 97 aa11.23□□□□□ -0.61
LSM4-204ENST00000594828 SPCS1Q9Y6A9 102 aa11.22□□□□□ -0.61
LSM4-204ENST00000594828 IGKV2D-30A0A075B6S6 120 aa11.21□□□□□ -0.61
LSM4-204ENST00000594828 KRTAP9-7A8MTY7 169 aa11.21□□□□□ -0.61
LSM4-204ENST00000594828 IGKV2-30P06310 120 aa11.21□□□□□ -0.61
LSM4-204ENST00000594828 Q5W150 140 aa11.2□□□□□ -0.62
LSM4-204ENST00000594828 Q8N9L7 120 aa11.2□□□□□ -0.62
LSM4-204ENST00000594828 CASC2Q6XLA1 102 aa11.18□□□□□ -0.62
LSM4-204ENST00000594828 FCGBPQ9Y6R7 5405 aaPredicted RBP11.17□□□□□ -0.62
LSM4-204ENST00000594828 C7orf65Q6ZTY9 151 aa11.17□□□□□ -0.62
LSM4-204ENST00000594828 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
LSM4-204ENST00000594828 HCG22E2RYF7 251 aa11.14□□□□□ -0.63
LSM4-204ENST00000594828 CXCL6P80162 114 aa11.07□□□□□ -0.64
LSM4-204ENST00000594828 UBL5Q9BZL1 73 aa11.07□□□□□ -0.64
LSM4-204ENST00000594828 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
LSM4-204ENST00000594828 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
LSM4-204ENST00000594828 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
LSM4-204ENST00000594828 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
LSM4-204ENST00000594828 KRTAP19-6Q3LI70 58 aa11.02□□□□□ -0.65
LSM4-204ENST00000594828 K7EP34 96 aa11□□□□□ -0.65
LSM4-204ENST00000594828 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
LSM4-204ENST00000594828 C5orf47Q569G3 176 aa10.85□□□□□ -0.67
LSM4-204ENST00000594828 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
LSM4-204ENST00000594828 TP53AIP1Q9HCN2 124 aa10.84□□□□□ -0.67
LSM4-204ENST00000594828 MACF1Q9UPN3 7388 aaKnown RBP10.83□□□□□ -0.68
LSM4-204ENST00000594828 C1orf64Q8NEQ6 169 aa10.82□□□□□ -0.68
LSM4-204ENST00000594828 F8W1H4 67 aa10.81□□□□□ -0.68
LSM4-204ENST00000594828 S4R3F8 94 aa10.8□□□□□ -0.68
LSM4-204ENST00000594828 ETDBQ3ZM63 59 aa10.78□□□□□ -0.68
LSM4-204ENST00000594828 FAM236AA0A1B0GUQ0 79 aa10.76□□□□□ -0.69
LSM4-204ENST00000594828 FAM236BA0A1B0GV22 79 aa10.76□□□□□ -0.69
LSM4-204ENST00000594828 CSAG1Q6PB30 78 aa10.75□□□□□ -0.69
LSM4-204ENST00000594828 LCA10Q71F78 164 aa10.72□□□□□ -0.69
LSM4-204ENST00000594828 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
LSM4-204ENST00000594828 PCP4L1A6NKN8 68 aa10.68□□□□□ -0.7
LSM4-204ENST00000594828 CYP4F30PQ9H0H9 118 aa10.64□□□□□ -0.71
LSM4-204ENST00000594828 TRAV22A0A0B4J277 110 aa10.57□□□□□ -0.72
LSM4-204ENST00000594828 SPRR2GQ9BYE4 73 aa10.57□□□□□ -0.72
LSM4-204ENST00000594828 ACYP1P07311 99 aa10.56□□□□□ -0.72
LSM4-204ENST00000594828 KRTAP6-3Q3LI67 103 aa10.55□□□□□ -0.72
LSM4-204ENST00000594828 Q5VV11 94 aa10.55□□□□□ -0.72
LSM4-204ENST00000594828 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
LSM4-204ENST00000594828 LOC101927531A0A1B0GV80 90 aa10.54□□□□□ -0.72
LSM4-204ENST00000594828 MT1BP07438 61 aa10.54□□□□□ -0.72
LSM4-204ENST00000594828 KLKP1Q107X0 134 aa10.52□□□□□ -0.73
LSM4-204ENST00000594828 KRTAP19-8Q3LI54 63 aa10.51□□□□□ -0.73
LSM4-204ENST00000594828 A6NN06 94 aa10.49□□□□□ -0.73
LSM4-204ENST00000594828 ATP5EP2Q5VTU8 51 aa10.48□□□□□ -0.73
LSM4-204ENST00000594828 A0A087WVE0 104 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms