RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 MT-ATP8P03928 68 aa9.47□□□□□ -0.89
AP3D1-211ENST00000591650 Q6ZVQ6 151 aa9.47□□□□□ -0.89
AP3D1-211ENST00000591650 XP32Q5T750 250 aa9.46□□□□□ -0.9
AP3D1-211ENST00000591650 J3KT08 172 aa9.45□□□□□ -0.9
AP3D1-211ENST00000591650 MUC17Q685J3 4493 aa9.43□□□□□ -0.9
AP3D1-211ENST00000591650 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
AP3D1-211ENST00000591650 DSCR10P59022 87 aa9.41□□□□□ -0.9
AP3D1-211ENST00000591650 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
AP3D1-211ENST00000591650 UBL5Q9BZL1 73 aa9.4□□□□□ -0.9
AP3D1-211ENST00000591650 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
AP3D1-211ENST00000591650 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
AP3D1-211ENST00000591650 IGKV3D-7A0A0C4DH55 119 aa9.39□□□□□ -0.91
AP3D1-211ENST00000591650 A8MWP4 228 aa9.39□□□□□ -0.91
AP3D1-211ENST00000591650 BPY2O14599 106 aa9.38□□□□□ -0.91
AP3D1-211ENST00000591650 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
AP3D1-211ENST00000591650 NDUFB1O75438 58 aa9.35□□□□□ -0.91
AP3D1-211ENST00000591650 K7EQZ3 153 aa9.34□□□□□ -0.91
AP3D1-211ENST00000591650 LINC00313P59037 77 aa9.34□□□□□ -0.91
AP3D1-211ENST00000591650 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
AP3D1-211ENST00000591650 PRR15Q8IV56 129 aa9.33□□□□□ -0.92
AP3D1-211ENST00000591650 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
AP3D1-211ENST00000591650 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
AP3D1-211ENST00000591650 Q8N9L7 120 aa9.32□□□□□ -0.92
AP3D1-211ENST00000591650 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
AP3D1-211ENST00000591650 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
AP3D1-211ENST00000591650 MMP24-AS1A0A0U1RRL7 71 aa9.27□□□□□ -0.93
AP3D1-211ENST00000591650 Q75L30 129 aa9.27□□□□□ -0.93
AP3D1-211ENST00000591650 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
AP3D1-211ENST00000591650 A8MUU9 505 aa9.26□□□□□ -0.93
AP3D1-211ENST00000591650 ANAPC13Q9BS18 74 aa9.26□□□□□ -0.93
AP3D1-211ENST00000591650 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
AP3D1-211ENST00000591650 CXCL6P80162 114 aa9.24□□□□□ -0.93
AP3D1-211ENST00000591650 MUC2Q02817 5179 aa9.23□□□□□ -0.93
AP3D1-211ENST00000591650 PCOTHQ58A44 107 aa9.23□□□□□ -0.93
AP3D1-211ENST00000591650 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
AP3D1-211ENST00000591650 hDV103S1A0JD37 113 aa9.18□□□□□ -0.94
AP3D1-211ENST00000591650 WFDC13Q8IUB5 93 aa9.18□□□□□ -0.94
AP3D1-211ENST00000591650 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
AP3D1-211ENST00000591650 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
AP3D1-211ENST00000591650 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
AP3D1-211ENST00000591650 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
AP3D1-211ENST00000591650 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
AP3D1-211ENST00000591650 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
AP3D1-211ENST00000591650 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
AP3D1-211ENST00000591650 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
AP3D1-211ENST00000591650 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
AP3D1-211ENST00000591650 ATOX1O00244 68 aa9.09□□□□□ -0.95
AP3D1-211ENST00000591650 HIST1H4AP62805 103 aaKnown RBP9.09□□□□□ -0.95
AP3D1-211ENST00000591650 NDUFS5O43920 106 aa9.07□□□□□ -0.96
AP3D1-211ENST00000591650 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
AP3D1-211ENST00000591650 A0A087WVE0 104 aa9.05□□□□□ -0.96
AP3D1-211ENST00000591650 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
AP3D1-211ENST00000591650 CCDC179H3BU77 68 aa9□□□□□ -0.97
AP3D1-211ENST00000591650 UQCRQO14949 82 aa8.99□□□□□ -0.97
AP3D1-211ENST00000591650 COX7CP15954 63 aa8.97□□□□□ -0.97
AP3D1-211ENST00000591650 Q5W150 140 aa8.97□□□□□ -0.97
AP3D1-211ENST00000591650 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
AP3D1-211ENST00000591650 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
AP3D1-211ENST00000591650 KRTAP19-2Q3LHN2 52 aa8.89□□□□□ -0.99
AP3D1-211ENST00000591650 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
AP3D1-211ENST00000591650 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
AP3D1-211ENST00000591650 SPINK7P58062 85 aa8.88□□□□□ -0.99
AP3D1-211ENST00000591650 HRES1P13985 223 aa8.86□□□□□ -0.99
AP3D1-211ENST00000591650 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
AP3D1-211ENST00000591650 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
AP3D1-211ENST00000591650 IGKV2-30P06310 120 aa8.84□□□□□ -0.99
AP3D1-211ENST00000591650 LCE2CQ5TA81 110 aa8.83□□□□□ -1
AP3D1-211ENST00000591650 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
AP3D1-211ENST00000591650 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
AP3D1-211ENST00000591650 OCR1Q9BZK8 76 aa8.8□□□□□ -1
AP3D1-211ENST00000591650 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
AP3D1-211ENST00000591650 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
AP3D1-211ENST00000591650 COX6B2Q6YFQ2 88 aa8.76□□□□□ -1.01
AP3D1-211ENST00000591650 H0Y9P7 68 aa8.74□□□□□ -1.01
AP3D1-211ENST00000591650 FLGP20930 4061 aaPredicted RBP8.73□□□□□ -1.01
AP3D1-211ENST00000591650 TMEM258P61165 79 aa8.72□□□□□ -1.01
AP3D1-211ENST00000591650 C20orf197Q8N268 126 aa8.71□□□□□ -1.01
AP3D1-211ENST00000591650 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.01
AP3D1-211ENST00000591650 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
AP3D1-211ENST00000591650 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
AP3D1-211ENST00000591650 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
AP3D1-211ENST00000591650 KRTAP9-2Q9BYQ4 174 aa8.68□□□□□ -1.02
AP3D1-211ENST00000591650 MT1HP80294 61 aa8.67□□□□□ -1.02
AP3D1-211ENST00000591650 NDUFC1O43677 76 aa8.66□□□□□ -1.02
AP3D1-211ENST00000591650 KLKP1Q107X0 134 aa8.66□□□□□ -1.02
AP3D1-211ENST00000591650 CYP4F30PQ9H0H9 118 aa8.66□□□□□ -1.02
AP3D1-211ENST00000591650 MP68P56378 58 aa8.64□□□□□ -1.03
AP3D1-211ENST00000591650 LINC00208Q96KT6 92 aa8.64□□□□□ -1.03
AP3D1-211ENST00000591650 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
AP3D1-211ENST00000591650 C4orf26Q17RF5 130 aa8.63□□□□□ -1.03
AP3D1-211ENST00000591650 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
AP3D1-211ENST00000591650 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
AP3D1-211ENST00000591650 SNURFQ9Y675 71 aa8.59□□□□□ -1.03
AP3D1-211ENST00000591650 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
AP3D1-211ENST00000591650 H7BZZ5 65 aa8.56□□□□□ -1.04
AP3D1-211ENST00000591650 H3BPC8 53 aa8.55□□□□□ -1.04
AP3D1-211ENST00000591650 ATP5EP56381 51 aaPredicted RBP8.55□□□□□ -1.04
AP3D1-211ENST00000591650 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
AP3D1-211ENST00000591650 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
AP3D1-211ENST00000591650 M0R2T5 61 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms