RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
GCDH-216ENST00000591470 LINC00336Q6ZUF6 198 aa10.95□□□□□ -0.66
GCDH-216ENST00000591470 Q5XG85 94 aa10.94□□□□□ -0.66
GCDH-216ENST00000591470 SPINK6Q6UWN8 80 aa10.93□□□□□ -0.66
GCDH-216ENST00000591470 NOTCH2NLQ7Z3S9 236 aa10.93□□□□□ -0.66
GCDH-216ENST00000591470 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
GCDH-216ENST00000591470 SMIM26A0A096LP01 95 aa10.91□□□□□ -0.66
GCDH-216ENST00000591470 C1orf64Q8NEQ6 169 aa10.91□□□□□ -0.66
GCDH-216ENST00000591470 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
GCDH-216ENST00000591470 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
GCDH-216ENST00000591470 C8orf87E5RJ46 101 aa10.86□□□□□ -0.67
GCDH-216ENST00000591470 FP248Q71RG6 208 aaPredicted RBP10.86□□□□□ -0.67
GCDH-216ENST00000591470 SPANXA2-OT1Q8N9U9 137 aa10.86□□□□□ -0.67
GCDH-216ENST00000591470 NDUFS5O43920 106 aa10.85□□□□□ -0.67
GCDH-216ENST00000591470 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
GCDH-216ENST00000591470 RYR3Q15413 4870 aa10.84□□□□□ -0.67
GCDH-216ENST00000591470 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
GCDH-216ENST00000591470 PLA2G1BP04054 148 aaKnown RBP10.82□□□□□ -0.68
GCDH-216ENST00000591470 C4orf26Q17RF5 130 aa10.82□□□□□ -0.68
GCDH-216ENST00000591470 LIMD2Q9BT23 127 aa10.81□□□□□ -0.68
GCDH-216ENST00000591470 PRR4Q16378 134 aa10.8□□□□□ -0.68
GCDH-216ENST00000591470 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
GCDH-216ENST00000591470 DYNC1H1Q14204 4646 aaKnown RBP10.78□□□□□ -0.68
GCDH-216ENST00000591470 PKHD1P08F94 4074 aa10.77□□□□□ -0.68
GCDH-216ENST00000591470 LINC00313P59037 77 aa10.75□□□□□ -0.69
GCDH-216ENST00000591470 KRTAP13-3Q3SY46 172 aa10.75□□□□□ -0.69
GCDH-216ENST00000591470 SPINK1P00995 79 aa10.73□□□□□ -0.69
GCDH-216ENST00000591470 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
GCDH-216ENST00000591470 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
GCDH-216ENST00000591470 Q5W150 140 aa10.72□□□□□ -0.69
GCDH-216ENST00000591470 SMR3BP02814 79 aaPredicted RBP10.7□□□□□ -0.7
GCDH-216ENST00000591470 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
GCDH-216ENST00000591470 PCOTHQ58A44 107 aa10.7□□□□□ -0.7
GCDH-216ENST00000591470 KRTAP10-4P60372 401 aaPredicted RBP10.69□□□□□ -0.7
GCDH-216ENST00000591470 LOC101927531A0A1B0GV80 90 aa10.68□□□□□ -0.7
GCDH-216ENST00000591470 KRTAP16-1A8MUX0 517 aa10.68□□□□□ -0.7
GCDH-216ENST00000591470 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
GCDH-216ENST00000591470 RPS29P62273 56 aaKnown RBP10.67□□□□□ -0.7
GCDH-216ENST00000591470 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.7
GCDH-216ENST00000591470 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.7
GCDH-216ENST00000591470 LINC00304Q8N9R0 145 aa10.64□□□□□ -0.71
GCDH-216ENST00000591470 SPAG11AQ6PDA7 123 aa10.64□□□□□ -0.71
GCDH-216ENST00000591470 SVIPQ8NHG7 77 aa10.64□□□□□ -0.71
GCDH-216ENST00000591470 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
GCDH-216ENST00000591470 Q1T7F1 81 aa10.61□□□□□ -0.71
GCDH-216ENST00000591470 COA5Q86WW8 74 aa10.56□□□□□ -0.72
GCDH-216ENST00000591470 FAT1Q14517 4588 aa10.52□□□□□ -0.73
GCDH-216ENST00000591470 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
GCDH-216ENST00000591470 PKHD1L1Q86WI1 4243 aa10.5□□□□□ -0.73
GCDH-216ENST00000591470 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
GCDH-216ENST00000591470 V9GYY9 64 aa10.49□□□□□ -0.73
GCDH-216ENST00000591470 HRES1P13985 223 aa10.47□□□□□ -0.73
GCDH-216ENST00000591470 EPPK1P58107 5090 aaKnown RBP10.46□□□□□ -0.73
GCDH-216ENST00000591470 DMAC1Q96GE9 116 aa10.38□□□□□ -0.75
GCDH-216ENST00000591470 PSPHP1O15172 72 aa10.38□□□□□ -0.75
GCDH-216ENST00000591470 ACYP2P14621 99 aa10.36□□□□□ -0.75
GCDH-216ENST00000591470 A8MUN3 132 aa10.35□□□□□ -0.75
GCDH-216ENST00000591470 IGKV2D-30A0A075B6S6 120 aa10.34□□□□□ -0.75
GCDH-216ENST00000591470 PRO0628Q9UI54 55 aa10.34□□□□□ -0.75
GCDH-216ENST00000591470 Q5VV11 94 aa10.31□□□□□ -0.76
GCDH-216ENST00000591470 C20orf166-AS1Q96NR2 134 aa10.31□□□□□ -0.76
GCDH-216ENST00000591470 A8MUU9 505 aa10.3□□□□□ -0.76
GCDH-216ENST00000591470 BRK1Q8WUW1 75 aa10.3□□□□□ -0.76
GCDH-216ENST00000591470 HSPG2P98160 4391 aa10.29□□□□□ -0.76
GCDH-216ENST00000591470 Q5VSD8 79 aa10.29□□□□□ -0.76
GCDH-216ENST00000591470 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
GCDH-216ENST00000591470 RYR1P21817 5038 aa10.29□□□□□ -0.76
GCDH-216ENST00000591470 KIAA1109Q2LD37 5005 aa10.28□□□□□ -0.76
GCDH-216ENST00000591470 C9orf92A6NGG3 77 aa10.27□□□□□ -0.76
GCDH-216ENST00000591470 PRR15LQ9BU68 103 aa10.27□□□□□ -0.76
GCDH-216ENST00000591470 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
GCDH-216ENST00000591470 C7orf65Q6ZTY9 151 aa10.26□□□□□ -0.77
GCDH-216ENST00000591470 KRTAP17-1Q9BYP8 105 aa10.25□□□□□ -0.77
GCDH-216ENST00000591470 Q8N1X5 172 aa10.25□□□□□ -0.77
GCDH-216ENST00000591470 Q75L30 129 aa10.22□□□□□ -0.77
GCDH-216ENST00000591470 FLG2Q5D862 2391 aaPredicted RBP10.2□□□□□ -0.78
GCDH-216ENST00000591470 CHKB-CPT1BH3BT56 60 aa10.19□□□□□ -0.78
GCDH-216ENST00000591470 TNXBP22105 4242 aa10.18□□□□□ -0.78
GCDH-216ENST00000591470 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
GCDH-216ENST00000591470 LRP1Q07954 4544 aaKnown RBP10.12□□□□□ -0.79
GCDH-216ENST00000591470 BIRC6Q9NR09 4857 aa10.11□□□□□ -0.79
GCDH-216ENST00000591470 A6NED7 52 aa10.04□□□□□ -0.8
GCDH-216ENST00000591470 SPINK7P58062 85 aa10.03□□□□□ -0.8
GCDH-216ENST00000591470 A8MU10 97 aa10□□□□□ -0.81
GCDH-216ENST00000591470 MT1HL1P0DM35 61 aa10□□□□□ -0.81
GCDH-216ENST00000591470 LCA10Q71F78 164 aa9.99□□□□□ -0.81
GCDH-216ENST00000591470 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
GCDH-216ENST00000591470 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
GCDH-216ENST00000591470 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.82
GCDH-216ENST00000591470 A0A1B0GU69 56 aa9.95□□□□□ -0.82
GCDH-216ENST00000591470 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
GCDH-216ENST00000591470 ATP11AUNQ6ZP68 121 aa9.92□□□□□ -0.82
GCDH-216ENST00000591470 HERC2O95714 4834 aa9.91□□□□□ -0.82
GCDH-216ENST00000591470 XP32Q5T750 250 aa9.91□□□□□ -0.82
GCDH-216ENST00000591470 MYCBP2O75592 4640 aa9.88□□□□□ -0.83
GCDH-216ENST00000591470 COX6B2Q6YFQ2 88 aa9.86□□□□□ -0.83
GCDH-216ENST00000591470 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
GCDH-216ENST00000591470 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
GCDH-216ENST00000591470 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
GCDH-216ENST00000591470 PMAIP1Q13794 54 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms