RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 ATP5EP56381 51 aaPredicted RBP15.09■□□□□ 0.01
RUNDC3A-206ENST00000590941 DYNC1H1Q14204 4646 aaKnown RBP15.09■□□□□ 0.01
RUNDC3A-206ENST00000590941 FAM236DA0A1B0GTK5 79 aa15.09■□□□□ 0.01
RUNDC3A-206ENST00000590941 SPINK1P00995 79 aa15.09■□□□□ 0.01
RUNDC3A-206ENST00000590941 FAM236CP0DP71 79 aa15.09■□□□□ 0.01
RUNDC3A-206ENST00000590941 RPS29P62273 56 aaKnown RBP15.06■□□□□ 0
RUNDC3A-206ENST00000590941 SPAG11AQ6PDA7 123 aa15.06■□□□□ 0
RUNDC3A-206ENST00000590941 KMT2CQ8NEZ4 4911 aaKnown RBP15.06■□□□□ 0
RUNDC3A-206ENST00000590941 PKHD1P08F94 4074 aa15.05■□□□□ -0
RUNDC3A-206ENST00000590941 MRPL34Q9BQ48 92 aaKnown RBP15.05■□□□□ -0
RUNDC3A-206ENST00000590941 ZCCHC13Q8WW36 166 aaKnown RBP15.04■□□□□ -0
RUNDC3A-206ENST00000590941 VPS13BQ7Z7G8 4022 aa15.03■□□□□ -0
RUNDC3A-206ENST00000590941 KRTAP10-4P60372 401 aaPredicted RBP15.03■□□□□ -0
RUNDC3A-206ENST00000590941 RPS28P62857 69 aaKnown RBP15.03■□□□□ -0
RUNDC3A-206ENST00000590941 C1orf195Q5TG92 126 aa15.02□□□□□ -0.01
RUNDC3A-206ENST00000590941 H0Y9P7 68 aa15□□□□□ -0.01
RUNDC3A-206ENST00000590941 TRAV22A0A0B4J277 110 aa14.98□□□□□ -0.01
RUNDC3A-206ENST00000590941 LINC00304Q8N9R0 145 aa14.97□□□□□ -0.01
RUNDC3A-206ENST00000590941 PRR26Q8N8Z3 221 aa14.96□□□□□ -0.01
RUNDC3A-206ENST00000590941 FAM229AH3BQW9 127 aa14.93□□□□□ -0.02
RUNDC3A-206ENST00000590941 APOBP04114 4563 aaKnown RBP14.92□□□□□ -0.02
RUNDC3A-206ENST00000590941 NDUFS5O43920 106 aa14.92□□□□□ -0.02
RUNDC3A-206ENST00000590941 LINC00208Q96KT6 92 aa14.92□□□□□ -0.02
RUNDC3A-206ENST00000590941 LINC00313P59037 77 aa14.9□□□□□ -0.02
RUNDC3A-206ENST00000590941 NOTCH2NLQ7Z3S9 236 aa14.9□□□□□ -0.02
RUNDC3A-206ENST00000590941 SERP1Q9Y6X1 66 aa14.87□□□□□ -0.03
RUNDC3A-206ENST00000590941 C1orf64Q8NEQ6 169 aa14.84□□□□□ -0.03
RUNDC3A-206ENST00000590941 RYR3Q15413 4870 aa14.83□□□□□ -0.04
RUNDC3A-206ENST00000590941 Q8N9P0 234 aaPredicted RBP14.76□□□□□ -0.05
RUNDC3A-206ENST00000590941 SPANXA2-OT1Q8N9U9 137 aa14.74□□□□□ -0.05
RUNDC3A-206ENST00000590941 Q5VSD8 79 aa14.71□□□□□ -0.05
RUNDC3A-206ENST00000590941 CYP4F30PQ9H0H9 118 aa14.7□□□□□ -0.06
RUNDC3A-206ENST00000590941 LOC101927531A0A1B0GV80 90 aa14.69□□□□□ -0.06
RUNDC3A-206ENST00000590941 KRTAP16-1A8MUX0 517 aa14.68□□□□□ -0.06
RUNDC3A-206ENST00000590941 FAT1Q14517 4588 aa14.65□□□□□ -0.06
RUNDC3A-206ENST00000590941 KRTAP13-3Q3SY46 172 aa14.63□□□□□ -0.07
RUNDC3A-206ENST00000590941 OXTP01178 125 aa14.61□□□□□ -0.07
RUNDC3A-206ENST00000590941 PKHD1L1Q86WI1 4243 aa14.58□□□□□ -0.07
RUNDC3A-206ENST00000590941 Q5W150 140 aa14.58□□□□□ -0.08
RUNDC3A-206ENST00000590941 IGLV7-46A0A075B6I9 117 aa14.54□□□□□ -0.08
RUNDC3A-206ENST00000590941 SMIM26A0A096LP01 95 aa14.54□□□□□ -0.08
RUNDC3A-206ENST00000590941 KRTAP10-8P60410 259 aa14.51□□□□□ -0.09
RUNDC3A-206ENST00000590941 PCOTHQ58A44 107 aa14.5□□□□□ -0.09
RUNDC3A-206ENST00000590941 PRR4Q16378 134 aa14.46□□□□□ -0.09
RUNDC3A-206ENST00000590941 Q8N1X5 172 aa14.46□□□□□ -0.09
RUNDC3A-206ENST00000590941 HSPG2P98160 4391 aa14.43□□□□□ -0.1
RUNDC3A-206ENST00000590941 IGKV2-30P06310 120 aa14.42□□□□□ -0.1
RUNDC3A-206ENST00000590941 RYR1P21817 5038 aa14.38□□□□□ -0.11
RUNDC3A-206ENST00000590941 FP248Q71RG6 208 aaPredicted RBP14.36□□□□□ -0.11
RUNDC3A-206ENST00000590941 C20orf166-AS1Q96NR2 134 aa14.36□□□□□ -0.11
RUNDC3A-206ENST00000590941 RETNLBQ9BQ08 111 aa14.34□□□□□ -0.11
RUNDC3A-206ENST00000590941 EPPK1P58107 5090 aaKnown RBP14.34□□□□□ -0.11
RUNDC3A-206ENST00000590941 A8MUU9 505 aa14.33□□□□□ -0.12
RUNDC3A-206ENST00000590941 C9orf92A6NGG3 77 aa14.29□□□□□ -0.12
RUNDC3A-206ENST00000590941 FLG2Q5D862 2391 aaPredicted RBP14.27□□□□□ -0.13
RUNDC3A-206ENST00000590941 HRES1P13985 223 aa14.23□□□□□ -0.13
RUNDC3A-206ENST00000590941 COA5Q86WW8 74 aa14.23□□□□□ -0.13
RUNDC3A-206ENST00000590941 C7orf65Q6ZTY9 151 aa14.23□□□□□ -0.13
RUNDC3A-206ENST00000590941 IGKV2D-30A0A075B6S6 120 aa14.22□□□□□ -0.13
RUNDC3A-206ENST00000590941 KRTAP17-1Q9BYP8 105 aa14.22□□□□□ -0.13
RUNDC3A-206ENST00000590941 Q75L30 129 aa14.18□□□□□ -0.14
RUNDC3A-206ENST00000590941 V9GYY9 64 aa14.17□□□□□ -0.14
RUNDC3A-206ENST00000590941 ACYP2P14621 99 aa14.17□□□□□ -0.14
RUNDC3A-206ENST00000590941 DMAC1Q96GE9 116 aa14.16□□□□□ -0.14
RUNDC3A-206ENST00000590941 MT1HL1P0DM35 61 aa14.15□□□□□ -0.14
RUNDC3A-206ENST00000590941 Q1T7F1 81 aa14.15□□□□□ -0.14
RUNDC3A-206ENST00000590941 TNXBP22105 4242 aa14.14□□□□□ -0.15
RUNDC3A-206ENST00000590941 C4orf26Q17RF5 130 aa14.12□□□□□ -0.15
RUNDC3A-206ENST00000590941 MPLKIPQ8TAP9 179 aa14.11□□□□□ -0.15
RUNDC3A-206ENST00000590941 FAT3Q8TDW7 4589 aa14.08□□□□□ -0.15
RUNDC3A-206ENST00000590941 KIAA1109Q2LD37 5005 aa14.07□□□□□ -0.16
RUNDC3A-206ENST00000590941 LRP1Q07954 4544 aaKnown RBP14.07□□□□□ -0.16
RUNDC3A-206ENST00000590941 BIRC6Q9NR09 4857 aa14□□□□□ -0.17
RUNDC3A-206ENST00000590941 A8MUN3 132 aa13.98□□□□□ -0.17
RUNDC3A-206ENST00000590941 ATP11AUNQ6ZP68 121 aa13.95□□□□□ -0.18
RUNDC3A-206ENST00000590941 CHKB-CPT1BH3BT56 60 aa13.95□□□□□ -0.18
RUNDC3A-206ENST00000590941 RPL37P61927 97 aaKnown RBP13.94□□□□□ -0.18
RUNDC3A-206ENST00000590941 SPINK7P58062 85 aa13.89□□□□□ -0.19
RUNDC3A-206ENST00000590941 XP32Q5T750 250 aa13.88□□□□□ -0.19
RUNDC3A-206ENST00000590941 DMBT1Q9UGM3 2413 aaPredicted RBP13.87□□□□□ -0.19
RUNDC3A-206ENST00000590941 LINC01558Q9Y6Z2 57 aa13.82□□□□□ -0.2
RUNDC3A-206ENST00000590941 TPRXLQ17RH7 258 aa13.82□□□□□ -0.2
RUNDC3A-206ENST00000590941 KRTAP4-5Q9BYR2 181 aa13.79□□□□□ -0.2
RUNDC3A-206ENST00000590941 PSPHP1O15172 72 aa13.77□□□□□ -0.21
RUNDC3A-206ENST00000590941 PRR15LQ9BU68 103 aa13.75□□□□□ -0.21
RUNDC3A-206ENST00000590941 MYCBP2O75592 4640 aa13.73□□□□□ -0.21
RUNDC3A-206ENST00000590941 Q5VV11 94 aa13.69□□□□□ -0.22
RUNDC3A-206ENST00000590941 HERC2O95714 4834 aa13.68□□□□□ -0.22
RUNDC3A-206ENST00000590941 SPTSSBQ8NFR3 76 aa13.67□□□□□ -0.22
RUNDC3A-206ENST00000590941 COX6B2Q6YFQ2 88 aa13.66□□□□□ -0.22
RUNDC3A-206ENST00000590941 J3QL48 77 aa13.63□□□□□ -0.23
RUNDC3A-206ENST00000590941 SVIPQ8NHG7 77 aa13.6□□□□□ -0.23
RUNDC3A-206ENST00000590941 BRK1Q8WUW1 75 aa13.56□□□□□ -0.24
RUNDC3A-206ENST00000590941 KRTAP3-1Q9BYR8 98 aa13.56□□□□□ -0.24
RUNDC3A-206ENST00000590941 PRO0628Q9UI54 55 aa13.53□□□□□ -0.24
RUNDC3A-206ENST00000590941 A0A1B0GU69 56 aa13.5□□□□□ -0.25
RUNDC3A-206ENST00000590941 ABCA13Q86UQ4 5058 aa13.44□□□□□ -0.26
RUNDC3A-206ENST00000590941 A6NED7 52 aa13.43□□□□□ -0.26
RUNDC3A-206ENST00000590941 SEC61GP60059 68 aa13.37□□□□□ -0.27
RUNDC3A-206ENST00000590941 SEC61BP60468 96 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms