RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 KRTAP19-1Q8IUB9 90 aa10.72□□□□□ -0.69
DDX39A-215ENST00000590696 UBE2V1Q13404 147 aa10.71□□□□□ -0.69
DDX39A-215ENST00000590696 A0A1B0GVX0 72 aa10.7□□□□□ -0.7
DDX39A-215ENST00000590696 C8orf87E5RJ46 101 aa10.7□□□□□ -0.7
DDX39A-215ENST00000590696 HSD52Q0P140 79 aa10.7□□□□□ -0.7
DDX39A-215ENST00000590696 VPS25Q9BRG1 176 aa10.7□□□□□ -0.7
DDX39A-215ENST00000590696 MTURNQ8N3F0 131 aa10.67□□□□□ -0.7
DDX39A-215ENST00000590696 ZCCHC13Q8WW36 166 aaKnown RBP10.65□□□□□ -0.7
DDX39A-215ENST00000590696 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
DDX39A-215ENST00000590696 DSCR8Q96T75 97 aa10.62□□□□□ -0.71
DDX39A-215ENST00000590696 SPINK7P58062 85 aa10.61□□□□□ -0.71
DDX39A-215ENST00000590696 J3KT08 172 aa10.59□□□□□ -0.71
DDX39A-215ENST00000590696 PYY3Q5JQD4 70 aa10.58□□□□□ -0.72
DDX39A-215ENST00000590696 SCGB1C2P0DMR2 95 aa10.57□□□□□ -0.72
DDX39A-215ENST00000590696 C9JAW5 83 aa10.54□□□□□ -0.72
DDX39A-215ENST00000590696 C21orf62-AS1Q17RA5 79 aa10.54□□□□□ -0.72
DDX39A-215ENST00000590696 Q8N9P0 234 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-215ENST00000590696 Q6ZQT0 140 aa10.53□□□□□ -0.72
DDX39A-215ENST00000590696 NDUFB1O75438 58 aa10.52□□□□□ -0.73
DDX39A-215ENST00000590696 BAALC-AS2P0C853 105 aa10.52□□□□□ -0.73
DDX39A-215ENST00000590696 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
DDX39A-215ENST00000590696 WFDC13Q8IUB5 93 aa10.48□□□□□ -0.73
DDX39A-215ENST00000590696 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
DDX39A-215ENST00000590696 C8orf17Q9NRJ1 99 aa10.47□□□□□ -0.73
DDX39A-215ENST00000590696 A8MWP4 228 aa10.46□□□□□ -0.73
DDX39A-215ENST00000590696 LINC00846Q9NV44 126 aa10.46□□□□□ -0.73
DDX39A-215ENST00000590696 KRTAP19-6Q3LI70 58 aa10.44□□□□□ -0.74
DDX39A-215ENST00000590696 MACF1Q9UPN3 7388 aaKnown RBP10.42□□□□□ -0.74
DDX39A-215ENST00000590696 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
DDX39A-215ENST00000590696 JMJD7-PLA2G4BH0Y9G9 81 aa10.38□□□□□ -0.75
DDX39A-215ENST00000590696 Q6ZVQ6 151 aa10.38□□□□□ -0.75
DDX39A-215ENST00000590696 SYNE2Q8WXH0 6885 aaKnown RBP10.37□□□□□ -0.75
DDX39A-215ENST00000590696 A0A1B0GW54 56 aa10.37□□□□□ -0.75
DDX39A-215ENST00000590696 LOC110117498A0A087WWA1 95 aa10.36□□□□□ -0.75
DDX39A-215ENST00000590696 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
DDX39A-215ENST00000590696 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
DDX39A-215ENST00000590696 PDE6GP18545 87 aa10.31□□□□□ -0.76
DDX39A-215ENST00000590696 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
DDX39A-215ENST00000590696 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
DDX39A-215ENST00000590696 MRPL34Q9BQ48 92 aaKnown RBP10.28□□□□□ -0.76
DDX39A-215ENST00000590696 NREPQ16612 68 aa10.27□□□□□ -0.77
DDX39A-215ENST00000590696 H1FX-AS1Q4G0G2 97 aa10.27□□□□□ -0.77
DDX39A-215ENST00000590696 TMEM254Q8TBM7 123 aa10.27□□□□□ -0.77
DDX39A-215ENST00000590696 MMP24-AS1A0A0U1RRL7 71 aa10.26□□□□□ -0.77
DDX39A-215ENST00000590696 TMA7Q9Y2S6 64 aaKnown RBP10.24□□□□□ -0.77
DDX39A-215ENST00000590696 M0R143 59 aa10.21□□□□□ -0.77
DDX39A-215ENST00000590696 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
DDX39A-215ENST00000590696 NDUFS5O43920 106 aa10.2□□□□□ -0.78
DDX39A-215ENST00000590696 K7EQZ3 153 aa10.17□□□□□ -0.78
DDX39A-215ENST00000590696 IGKV2D-30A0A075B6S6 120 aa10.14□□□□□ -0.79
DDX39A-215ENST00000590696 IGKV2-30P06310 120 aa10.14□□□□□ -0.79
DDX39A-215ENST00000590696 KRTAP6-3Q3LI67 103 aa10.13□□□□□ -0.79
DDX39A-215ENST00000590696 Q5W150 140 aa10.1□□□□□ -0.79
DDX39A-215ENST00000590696 C7orf65Q6ZTY9 151 aa10.1□□□□□ -0.79
DDX39A-215ENST00000590696 BPY2O14599 106 aa10.04□□□□□ -0.8
DDX39A-215ENST00000590696 C4orf26Q17RF5 130 aa10□□□□□ -0.81
DDX39A-215ENST00000590696 H3BT86 120 aa9.99□□□□□ -0.81
DDX39A-215ENST00000590696 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
DDX39A-215ENST00000590696 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
DDX39A-215ENST00000590696 BATFQ16520 125 aa9.97□□□□□ -0.81
DDX39A-215ENST00000590696 Q8N9L7 120 aa9.97□□□□□ -0.81
DDX39A-215ENST00000590696 C5orf47Q569G3 176 aa9.93□□□□□ -0.82
DDX39A-215ENST00000590696 TSTD3H0UI37 97 aa9.91□□□□□ -0.82
DDX39A-215ENST00000590696 FAM236AA0A1B0GUQ0 79 aa9.9□□□□□ -0.82
DDX39A-215ENST00000590696 FAM236BA0A1B0GV22 79 aa9.9□□□□□ -0.82
DDX39A-215ENST00000590696 C9orf118A6NHY6 69 aa9.9□□□□□ -0.82
DDX39A-215ENST00000590696 CXCL6P80162 114 aa9.89□□□□□ -0.83
DDX39A-215ENST00000590696 SMIM6P0DI80 62 aa9.88□□□□□ -0.83
DDX39A-215ENST00000590696 A0A1W2PPM0 123 aa9.87□□□□□ -0.83
DDX39A-215ENST00000590696 A6NN06 94 aa9.86□□□□□ -0.83
DDX39A-215ENST00000590696 KRTAP3-1Q9BYR8 98 aa9.85□□□□□ -0.83
DDX39A-215ENST00000590696 TAX1BP3O14907 124 aa9.84□□□□□ -0.83
DDX39A-215ENST00000590696 MT1BP07438 61 aa9.84□□□□□ -0.83
DDX39A-215ENST00000590696 S4R3F8 94 aa9.83□□□□□ -0.84
DDX39A-215ENST00000590696 Q5VV11 94 aa9.81□□□□□ -0.84
DDX39A-215ENST00000590696 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
DDX39A-215ENST00000590696 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
DDX39A-215ENST00000590696 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
DDX39A-215ENST00000590696 LCA10Q71F78 164 aa9.77□□□□□ -0.85
DDX39A-215ENST00000590696 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
DDX39A-215ENST00000590696 NEBP20929 6669 aa9.75□□□□□ -0.85
DDX39A-215ENST00000590696 MUC12Q9UKN1 5478 aa9.73□□□□□ -0.85
DDX39A-215ENST00000590696 SMCPP49901 116 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-215ENST00000590696 UBL5Q9BZL1 73 aa9.72□□□□□ -0.85
DDX39A-215ENST00000590696 SPCS1Q9Y6A9 102 aa9.7□□□□□ -0.86
DDX39A-215ENST00000590696 KRTAP10-5P60370 271 aa9.68□□□□□ -0.86
DDX39A-215ENST00000590696 KLKP1Q107X0 134 aa9.66□□□□□ -0.86
DDX39A-215ENST00000590696 TP53AIP1Q9HCN2 124 aa9.62□□□□□ -0.87
DDX39A-215ENST00000590696 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
DDX39A-215ENST00000590696 PRO0461Q9UI25 63 aa9.57□□□□□ -0.88
DDX39A-215ENST00000590696 KRTAP5-9P26371 169 aa9.53□□□□□ -0.88
DDX39A-215ENST00000590696 KRTAP20-1Q3LI63 56 aa9.53□□□□□ -0.88
DDX39A-215ENST00000590696 IMUPQ9GZP8 106 aa9.49□□□□□ -0.89
DDX39A-215ENST00000590696 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
DDX39A-215ENST00000590696 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
DDX39A-215ENST00000590696 A0A087WVE0 104 aa9.48□□□□□ -0.89
DDX39A-215ENST00000590696 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
DDX39A-215ENST00000590696 K7EP34 96 aa9.47□□□□□ -0.89
DDX39A-215ENST00000590696 KMT2DO14686 5537 aa9.45□□□□□ -0.9
DDX39A-215ENST00000590696 COL5A1-AS1Q5SY13 56 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms