RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
CXXC1-212ENST00000589940 Q8N9L7 120 aa9.94□□□□□ -0.82
CXXC1-212ENST00000589940 HIST1H4AP62805 103 aaKnown RBP9.94□□□□□ -0.82
CXXC1-212ENST00000589940 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
CXXC1-212ENST00000589940 A8MWP4 228 aa9.92□□□□□ -0.82
CXXC1-212ENST00000589940 K7EQZ3 153 aa9.91□□□□□ -0.82
CXXC1-212ENST00000589940 COX7CP15954 63 aa9.91□□□□□ -0.82
CXXC1-212ENST00000589940 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.83
CXXC1-212ENST00000589940 A0A087WVE0 104 aa9.88□□□□□ -0.83
CXXC1-212ENST00000589940 NDUFB1O75438 58 aa9.88□□□□□ -0.83
CXXC1-212ENST00000589940 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
CXXC1-212ENST00000589940 RPS28P62857 69 aaKnown RBP9.87□□□□□ -0.83
CXXC1-212ENST00000589940 PRR15Q8IV56 129 aa9.87□□□□□ -0.83
CXXC1-212ENST00000589940 ATOX1O00244 68 aa9.85□□□□□ -0.83
CXXC1-212ENST00000589940 A0A1B0GVX0 72 aa9.84□□□□□ -0.83
CXXC1-212ENST00000589940 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
CXXC1-212ENST00000589940 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
CXXC1-212ENST00000589940 TMEM258P61165 79 aa9.78□□□□□ -0.84
CXXC1-212ENST00000589940 HCG22E2RYF7 251 aa9.78□□□□□ -0.84
CXXC1-212ENST00000589940 CYSTM1Q9H1C7 97 aa9.76□□□□□ -0.85
CXXC1-212ENST00000589940 MMP24-AS1A0A0U1RRL7 71 aa9.76□□□□□ -0.85
CXXC1-212ENST00000589940 J3QL48 77 aa9.76□□□□□ -0.85
CXXC1-212ENST00000589940 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
CXXC1-212ENST00000589940 PCLOQ9Y6V0 5065 aa9.75□□□□□ -0.85
CXXC1-212ENST00000589940 SERP2Q8N6R1 65 aa9.75□□□□□ -0.85
CXXC1-212ENST00000589940 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
CXXC1-212ENST00000589940 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
CXXC1-212ENST00000589940 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
CXXC1-212ENST00000589940 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
CXXC1-212ENST00000589940 hDV103S1A0JD37 113 aa9.71□□□□□ -0.86
CXXC1-212ENST00000589940 LINC00313P59037 77 aa9.71□□□□□ -0.86
CXXC1-212ENST00000589940 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
CXXC1-212ENST00000589940 TMEM254Q8TBM7 123 aa9.66□□□□□ -0.86
CXXC1-212ENST00000589940 C4orf26Q17RF5 130 aa9.65□□□□□ -0.86
CXXC1-212ENST00000589940 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
CXXC1-212ENST00000589940 IGLV7-46A0A075B6I9 117 aa9.63□□□□□ -0.87
CXXC1-212ENST00000589940 KRTAP16-1A8MUX0 517 aa9.62□□□□□ -0.87
CXXC1-212ENST00000589940 C9orf92A6NGG3 77 aa9.6□□□□□ -0.87
CXXC1-212ENST00000589940 PRR4Q16378 134 aa9.6□□□□□ -0.87
CXXC1-212ENST00000589940 OCR1Q9BZK8 76 aa9.59□□□□□ -0.87
CXXC1-212ENST00000589940 NDUFS5O43920 106 aa9.56□□□□□ -0.88
CXXC1-212ENST00000589940 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
CXXC1-212ENST00000589940 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
CXXC1-212ENST00000589940 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
CXXC1-212ENST00000589940 TP53AIP1Q9HCN2 124 aa9.52□□□□□ -0.88
CXXC1-212ENST00000589940 FAM236DA0A1B0GTK5 79 aa9.52□□□□□ -0.89
CXXC1-212ENST00000589940 FAM236CP0DP71 79 aa9.52□□□□□ -0.89
CXXC1-212ENST00000589940 HERC1Q15751 4861 aa9.51□□□□□ -0.89
CXXC1-212ENST00000589940 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
CXXC1-212ENST00000589940 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
CXXC1-212ENST00000589940 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
CXXC1-212ENST00000589940 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
CXXC1-212ENST00000589940 A8MUU9 505 aa9.47□□□□□ -0.89
CXXC1-212ENST00000589940 PRO0628Q9UI54 55 aa9.46□□□□□ -0.89
CXXC1-212ENST00000589940 H7BZZ5 65 aa9.45□□□□□ -0.9
CXXC1-212ENST00000589940 XP32Q5T750 250 aa9.44□□□□□ -0.9
CXXC1-212ENST00000589940 Q75L30 129 aa9.43□□□□□ -0.9
CXXC1-212ENST00000589940 TRAV22A0A0B4J277 110 aa9.42□□□□□ -0.9
CXXC1-212ENST00000589940 LPAP08519 4548 aa9.42□□□□□ -0.9
CXXC1-212ENST00000589940 KLKP1Q107X0 134 aa9.4□□□□□ -0.9
CXXC1-212ENST00000589940 Q5W150 140 aa9.4□□□□□ -0.9
CXXC1-212ENST00000589940 H0Y9P7 68 aa9.4□□□□□ -0.91
CXXC1-212ENST00000589940 MP68P56378 58 aa9.39□□□□□ -0.91
CXXC1-212ENST00000589940 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
CXXC1-212ENST00000589940 HMCN2Q8NDA2 5059 aa9.37□□□□□ -0.91
CXXC1-212ENST00000589940 RPL37P61927 97 aaKnown RBP9.37□□□□□ -0.91
CXXC1-212ENST00000589940 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
CXXC1-212ENST00000589940 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
CXXC1-212ENST00000589940 LRP2P98164 4655 aa9.34□□□□□ -0.91
CXXC1-212ENST00000589940 H3BPC8 53 aa9.33□□□□□ -0.92
CXXC1-212ENST00000589940 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
CXXC1-212ENST00000589940 LINC00208Q96KT6 92 aa9.32□□□□□ -0.92
CXXC1-212ENST00000589940 NDUFC1O43677 76 aa9.31□□□□□ -0.92
CXXC1-212ENST00000589940 ATP11AUNQ6ZP68 121 aa9.31□□□□□ -0.92
CXXC1-212ENST00000589940 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
CXXC1-212ENST00000589940 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
CXXC1-212ENST00000589940 LOC101927531A0A1B0GV80 90 aa9.27□□□□□ -0.93
CXXC1-212ENST00000589940 IGKV2-30P06310 120 aa9.23□□□□□ -0.93
CXXC1-212ENST00000589940 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
CXXC1-212ENST00000589940 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.94
CXXC1-212ENST00000589940 CYP4F30PQ9H0H9 118 aa9.21□□□□□ -0.94
CXXC1-212ENST00000589940 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
CXXC1-212ENST00000589940 C7orf65Q6ZTY9 151 aa9.19□□□□□ -0.94
CXXC1-212ENST00000589940 SEC61BP60468 96 aaKnown RBP9.16□□□□□ -0.94
CXXC1-212ENST00000589940 SPINK7P58062 85 aa9.15□□□□□ -0.95
CXXC1-212ENST00000589940 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
CXXC1-212ENST00000589940 V9GYY9 64 aa9.14□□□□□ -0.95
CXXC1-212ENST00000589940 MUC17Q685J3 4493 aa9.14□□□□□ -0.95
CXXC1-212ENST00000589940 SEC61GP60059 68 aa9.08□□□□□ -0.96
CXXC1-212ENST00000589940 HRES1P13985 223 aa9.05□□□□□ -0.96
CXXC1-212ENST00000589940 SPANXA2-OT1Q8N9U9 137 aa9.03□□□□□ -0.96
CXXC1-212ENST00000589940 UBR4Q5T4S7 5183 aa8.96□□□□□ -0.98
CXXC1-212ENST00000589940 Q1T7F1 81 aa8.96□□□□□ -0.98
CXXC1-212ENST00000589940 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
CXXC1-212ENST00000589940 PMAIP1Q13794 54 aa8.92□□□□□ -0.98
CXXC1-212ENST00000589940 MUC2Q02817 5179 aa8.91□□□□□ -0.98
CXXC1-212ENST00000589940 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
CXXC1-212ENST00000589940 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
CXXC1-212ENST00000589940 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
CXXC1-212ENST00000589940 A8MUN3 132 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms