RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 J3KT08 172 aa11.87□□□□□ -0.51
R3HDM4-204ENST00000589428 DSCR10P59022 87 aa11.86□□□□□ -0.51
R3HDM4-204ENST00000589428 IGKV3D-7A0A0C4DH55 119 aa11.84□□□□□ -0.51
R3HDM4-204ENST00000589428 CXCL6P80162 114 aa11.84□□□□□ -0.51
R3HDM4-204ENST00000589428 ATP5EP2Q5VTU8 51 aa11.83□□□□□ -0.52
R3HDM4-204ENST00000589428 UBR4Q5T4S7 5183 aa11.83□□□□□ -0.52
R3HDM4-204ENST00000589428 A8MWP4 228 aa11.8□□□□□ -0.52
R3HDM4-204ENST00000589428 KRTAP13-3Q3SY46 172 aa11.8□□□□□ -0.52
R3HDM4-204ENST00000589428 Q8N9L7 120 aa11.8□□□□□ -0.52
R3HDM4-204ENST00000589428 K7EQZ3 153 aa11.79□□□□□ -0.52
R3HDM4-204ENST00000589428 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
R3HDM4-204ENST00000589428 PRR15Q8IV56 129 aa11.74□□□□□ -0.53
R3HDM4-204ENST00000589428 NDUFB1O75438 58 aa11.74□□□□□ -0.53
R3HDM4-204ENST00000589428 IGHV6-1A0A0B4J1U7 121 aa11.73□□□□□ -0.53
R3HDM4-204ENST00000589428 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
R3HDM4-204ENST00000589428 HIST1H4AP62805 103 aaKnown RBP11.68□□□□□ -0.54
R3HDM4-204ENST00000589428 NOTCH2NLQ7Z3S9 236 aa11.68□□□□□ -0.54
R3HDM4-204ENST00000589428 IMUPQ9GZP8 106 aa11.68□□□□□ -0.54
R3HDM4-204ENST00000589428 C9orf92A6NGG3 77 aa11.67□□□□□ -0.54
R3HDM4-204ENST00000589428 A0A087WVE0 104 aa11.64□□□□□ -0.55
R3HDM4-204ENST00000589428 C8orf17Q9NRJ1 99 aa11.64□□□□□ -0.55
R3HDM4-204ENST00000589428 MMP24-AS1A0A0U1RRL7 71 aa11.63□□□□□ -0.55
R3HDM4-204ENST00000589428 XP32Q5T750 250 aa11.63□□□□□ -0.55
R3HDM4-204ENST00000589428 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
R3HDM4-204ENST00000589428 PCP4P48539 62 aa11.62□□□□□ -0.55
R3HDM4-204ENST00000589428 LINC00313P59037 77 aa11.61□□□□□ -0.55
R3HDM4-204ENST00000589428 MUC17Q685J3 4493 aa11.59□□□□□ -0.55
R3HDM4-204ENST00000589428 HCG22E2RYF7 251 aa11.58□□□□□ -0.56
R3HDM4-204ENST00000589428 WFDC13Q8IUB5 93 aa11.57□□□□□ -0.56
R3HDM4-204ENST00000589428 KRTAP16-1A8MUX0 517 aa11.56□□□□□ -0.56
R3HDM4-204ENST00000589428 RNF213Q63HN8 5207 aa11.55□□□□□ -0.56
R3HDM4-204ENST00000589428 hDV103S1A0JD37 113 aa11.55□□□□□ -0.56
R3HDM4-204ENST00000589428 CASC2Q6XLA1 102 aa11.55□□□□□ -0.56
R3HDM4-204ENST00000589428 SEC61BP60468 96 aaKnown RBP11.54□□□□□ -0.56
R3HDM4-204ENST00000589428 TMEM254Q8TBM7 123 aa11.51□□□□□ -0.57
R3HDM4-204ENST00000589428 FAM236AA0A1B0GUQ0 79 aa11.49□□□□□ -0.57
R3HDM4-204ENST00000589428 FAM236BA0A1B0GV22 79 aa11.49□□□□□ -0.57
R3HDM4-204ENST00000589428 MRPL34Q9BQ48 92 aaKnown RBP11.48□□□□□ -0.57
R3HDM4-204ENST00000589428 Q8N9P0 234 aaPredicted RBP11.43□□□□□ -0.58
R3HDM4-204ENST00000589428 RPL37P61927 97 aaKnown RBP11.43□□□□□ -0.58
R3HDM4-204ENST00000589428 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
R3HDM4-204ENST00000589428 A8MUU9 505 aa11.4□□□□□ -0.58
R3HDM4-204ENST00000589428 ANAPC13Q9BS18 74 aa11.4□□□□□ -0.58
R3HDM4-204ENST00000589428 MUC2Q02817 5179 aa11.39□□□□□ -0.59
R3HDM4-204ENST00000589428 PCOTHQ58A44 107 aa11.38□□□□□ -0.59
R3HDM4-204ENST00000589428 NDUFS5O43920 106 aa11.38□□□□□ -0.59
R3HDM4-204ENST00000589428 Q75L30 129 aa11.38□□□□□ -0.59
R3HDM4-204ENST00000589428 ATOX1O00244 68 aa11.34□□□□□ -0.59
R3HDM4-204ENST00000589428 A0A0U1RQV1 116 aa11.31□□□□□ -0.6
R3HDM4-204ENST00000589428 OCR1Q9BZK8 76 aa11.3□□□□□ -0.6
R3HDM4-204ENST00000589428 ATP11AUNQ6ZP68 121 aa11.29□□□□□ -0.6
R3HDM4-204ENST00000589428 KRTAP4-1Q9BYQ7 146 aa11.28□□□□□ -0.6
R3HDM4-204ENST00000589428 TP53AIP1Q9HCN2 124 aa11.27□□□□□ -0.61
R3HDM4-204ENST00000589428 ZCCHC13Q8WW36 166 aaKnown RBP11.24□□□□□ -0.61
R3HDM4-204ENST00000589428 Q5W150 140 aa11.23□□□□□ -0.61
R3HDM4-204ENST00000589428 UQCRQO14949 82 aa11.21□□□□□ -0.62
R3HDM4-204ENST00000589428 SMIM20Q8N5G0 67 aa11.2□□□□□ -0.62
R3HDM4-204ENST00000589428 SERP2Q8N6R1 65 aa11.2□□□□□ -0.62
R3HDM4-204ENST00000589428 CCDC179H3BU77 68 aa11.19□□□□□ -0.62
R3HDM4-204ENST00000589428 COX7CP15954 63 aa11.18□□□□□ -0.62
R3HDM4-204ENST00000589428 TRAV7A0A075B6U4 112 aa11.18□□□□□ -0.62
R3HDM4-204ENST00000589428 TRAV22A0A0B4J277 110 aa11.16□□□□□ -0.62
R3HDM4-204ENST00000589428 H0Y9P7 68 aa11.11□□□□□ -0.63
R3HDM4-204ENST00000589428 FAT4Q6V0I7 4981 aa11.1□□□□□ -0.63
R3HDM4-204ENST00000589428 C5orf47Q569G3 176 aa11.09□□□□□ -0.63
R3HDM4-204ENST00000589428 MP68P56378 58 aa11.05□□□□□ -0.64
R3HDM4-204ENST00000589428 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
R3HDM4-204ENST00000589428 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
R3HDM4-204ENST00000589428 IGKV2-30P06310 120 aa11.01□□□□□ -0.65
R3HDM4-204ENST00000589428 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
R3HDM4-204ENST00000589428 SPINK7P58062 85 aa10.98□□□□□ -0.65
R3HDM4-204ENST00000589428 LOC101927531A0A1B0GV80 90 aa10.98□□□□□ -0.65
R3HDM4-204ENST00000589428 H3BPC8 53 aa10.97□□□□□ -0.65
R3HDM4-204ENST00000589428 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
R3HDM4-204ENST00000589428 C20orf197Q8N268 126 aa10.97□□□□□ -0.65
R3HDM4-204ENST00000589428 KRTAP19-2Q3LHN2 52 aa10.94□□□□□ -0.66
R3HDM4-204ENST00000589428 CYP4F30PQ9H0H9 118 aa10.94□□□□□ -0.66
R3HDM4-204ENST00000589428 COX6B2Q6YFQ2 88 aa10.93□□□□□ -0.66
R3HDM4-204ENST00000589428 CYSTM1Q9H1C7 97 aa10.93□□□□□ -0.66
R3HDM4-204ENST00000589428 SNURFQ9Y675 71 aa10.92□□□□□ -0.66
R3HDM4-204ENST00000589428 LCE2AQ5TA79 106 aaPredicted RBP10.91□□□□□ -0.66
R3HDM4-204ENST00000589428 KLKP1Q107X0 134 aa10.89□□□□□ -0.67
R3HDM4-204ENST00000589428 LCE2CQ5TA81 110 aa10.89□□□□□ -0.67
R3HDM4-204ENST00000589428 HRES1P13985 223 aa10.84□□□□□ -0.67
R3HDM4-204ENST00000589428 H7BZZ5 65 aa10.78□□□□□ -0.68
R3HDM4-204ENST00000589428 RBM12B-AS1Q9P1G2 102 aa10.78□□□□□ -0.68
R3HDM4-204ENST00000589428 MT1HP80294 61 aa10.77□□□□□ -0.69
R3HDM4-204ENST00000589428 NDUFC1O43677 76 aa10.76□□□□□ -0.69
R3HDM4-204ENST00000589428 MPLKIPQ8TAP9 179 aa10.76□□□□□ -0.69
R3HDM4-204ENST00000589428 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
R3HDM4-204ENST00000589428 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
R3HDM4-204ENST00000589428 C4orf26Q17RF5 130 aa10.75□□□□□ -0.69
R3HDM4-204ENST00000589428 TMEM258P61165 79 aa10.74□□□□□ -0.69
R3HDM4-204ENST00000589428 FLGP20930 4061 aaPredicted RBP10.69□□□□□ -0.7
R3HDM4-204ENST00000589428 M0R2T5 61 aa10.67□□□□□ -0.7
R3HDM4-204ENST00000589428 KRTAP3-1Q9BYR8 98 aa10.61□□□□□ -0.71
R3HDM4-204ENST00000589428 SPANXA2-OT1Q8N9U9 137 aa10.59□□□□□ -0.71
R3HDM4-204ENST00000589428 ATP5EP56381 51 aaPredicted RBP10.54□□□□□ -0.72
R3HDM4-204ENST00000589428 DMAC1Q96GE9 116 aa10.53□□□□□ -0.72
R3HDM4-204ENST00000589428 A8MUN3 132 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms