RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 H3BT86 120 aa9.18□□□□□ -0.94
H3F3B-207ENST00000589417 NOTCH2NLQ7Z3S9 236 aa9.17□□□□□ -0.94
H3F3B-207ENST00000589417 C14orf132Q9NPU4 83 aa9.16□□□□□ -0.94
H3F3B-207ENST00000589417 A0A1B0GVX0 72 aa9.15□□□□□ -0.94
H3F3B-207ENST00000589417 C8orf87E5RJ46 101 aa9.15□□□□□ -0.94
H3F3B-207ENST00000589417 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
H3F3B-207ENST00000589417 MT1HP80294 61 aa9.13□□□□□ -0.95
H3F3B-207ENST00000589417 COL5A1-AS1Q5SY13 56 aa9.11□□□□□ -0.95
H3F3B-207ENST00000589417 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
H3F3B-207ENST00000589417 A8MWP4 228 aa9.07□□□□□ -0.96
H3F3B-207ENST00000589417 NDUFB1O75438 58 aa9.07□□□□□ -0.96
H3F3B-207ENST00000589417 MTURNQ8N3F0 131 aa9.06□□□□□ -0.96
H3F3B-207ENST00000589417 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
H3F3B-207ENST00000589417 NREPQ16612 68 aa9.04□□□□□ -0.96
H3F3B-207ENST00000589417 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
H3F3B-207ENST00000589417 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
H3F3B-207ENST00000589417 SMCPP49901 116 aaPredicted RBP9.02□□□□□ -0.97
H3F3B-207ENST00000589417 Q8N9P0 234 aaPredicted RBP9.02□□□□□ -0.97
H3F3B-207ENST00000589417 KRTAP9-2Q9BYQ4 174 aa9.02□□□□□ -0.97
H3F3B-207ENST00000589417 PRR15Q8IV56 129 aa9□□□□□ -0.97
H3F3B-207ENST00000589417 C8orf17Q9NRJ1 99 aa9□□□□□ -0.97
H3F3B-207ENST00000589417 PRO0461Q9UI25 63 aa9□□□□□ -0.97
H3F3B-207ENST00000589417 K7EP34 96 aa8.98□□□□□ -0.97
H3F3B-207ENST00000589417 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
H3F3B-207ENST00000589417 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
H3F3B-207ENST00000589417 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
H3F3B-207ENST00000589417 KRTAP10-6P60371 365 aaPredicted RBP8.93□□□□□ -0.98
H3F3B-207ENST00000589417 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
H3F3B-207ENST00000589417 Q6ZVQ6 151 aa8.92□□□□□ -0.98
H3F3B-207ENST00000589417 HRES1P13985 223 aa8.91□□□□□ -0.98
H3F3B-207ENST00000589417 GTF2H5Q6ZYL4 71 aa8.9□□□□□ -0.98
H3F3B-207ENST00000589417 MMP24-AS1A0A0U1RRL7 71 aa8.89□□□□□ -0.99
H3F3B-207ENST00000589417 PCP4L1A6NKN8 68 aa8.89□□□□□ -0.99
H3F3B-207ENST00000589417 M0R2T5 61 aa8.89□□□□□ -0.99
H3F3B-207ENST00000589417 BPY2O14599 106 aa8.89□□□□□ -0.99
H3F3B-207ENST00000589417 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
H3F3B-207ENST00000589417 K7EQZ3 153 aa8.88□□□□□ -0.99
H3F3B-207ENST00000589417 F8W1H4 67 aa8.86□□□□□ -0.99
H3F3B-207ENST00000589417 MRPL34Q9BQ48 92 aaKnown RBP8.86□□□□□ -0.99
H3F3B-207ENST00000589417 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
H3F3B-207ENST00000589417 RBM12B-AS1Q9P1G2 102 aa8.84□□□□□ -0.99
H3F3B-207ENST00000589417 SPINK7P58062 85 aa8.83□□□□□ -1
H3F3B-207ENST00000589417 LINC00846Q9NV44 126 aa8.82□□□□□ -1
H3F3B-207ENST00000589417 UBL5Q9BZL1 73 aa8.8□□□□□ -1
H3F3B-207ENST00000589417 FAM236DA0A1B0GTK5 79 aa8.76□□□□□ -1.01
H3F3B-207ENST00000589417 FAM236CP0DP71 79 aa8.76□□□□□ -1.01
H3F3B-207ENST00000589417 ETDBQ3ZM63 59 aa8.75□□□□□ -1.01
H3F3B-207ENST00000589417 Q8N9L7 120 aa8.75□□□□□ -1.01
H3F3B-207ENST00000589417 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
H3F3B-207ENST00000589417 NDUFS5O43920 106 aa8.7□□□□□ -1.02
H3F3B-207ENST00000589417 KRTAP9-8Q9BYQ0 159 aa8.7□□□□□ -1.02
H3F3B-207ENST00000589417 WFDC13Q8IUB5 93 aa8.69□□□□□ -1.02
H3F3B-207ENST00000589417 Q5W150 140 aa8.67□□□□□ -1.02
H3F3B-207ENST00000589417 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
H3F3B-207ENST00000589417 CXCL6P80162 114 aa8.66□□□□□ -1.02
H3F3B-207ENST00000589417 HCG22E2RYF7 251 aa8.65□□□□□ -1.02
H3F3B-207ENST00000589417 ACYP1P07311 99 aa8.61□□□□□ -1.03
H3F3B-207ENST00000589417 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
H3F3B-207ENST00000589417 FSIP2Q5CZC0 6907 aa8.58□□□□□ -1.04
H3F3B-207ENST00000589417 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
H3F3B-207ENST00000589417 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
H3F3B-207ENST00000589417 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
H3F3B-207ENST00000589417 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
H3F3B-207ENST00000589417 MT2AP02795 61 aa8.55□□□□□ -1.04
H3F3B-207ENST00000589417 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
H3F3B-207ENST00000589417 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
H3F3B-207ENST00000589417 ATP5EP2Q5VTU8 51 aa8.48□□□□□ -1.05
H3F3B-207ENST00000589417 MT1FP04733 61 aa8.47□□□□□ -1.05
H3F3B-207ENST00000589417 A0A1B0GV90 55 aa8.45□□□□□ -1.06
H3F3B-207ENST00000589417 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
H3F3B-207ENST00000589417 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
H3F3B-207ENST00000589417 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
H3F3B-207ENST00000589417 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
H3F3B-207ENST00000589417 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
H3F3B-207ENST00000589417 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
H3F3B-207ENST00000589417 USH2AO75445 5202 aa8.32□□□□□ -1.08
H3F3B-207ENST00000589417 TRAV22A0A0B4J277 110 aa8.32□□□□□ -1.08
H3F3B-207ENST00000589417 CYP4F30PQ9H0H9 118 aa8.32□□□□□ -1.08
H3F3B-207ENST00000589417 LCE2BO14633 110 aa8.31□□□□□ -1.08
H3F3B-207ENST00000589417 C1orf64Q8NEQ6 169 aa8.3□□□□□ -1.08
H3F3B-207ENST00000589417 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
H3F3B-207ENST00000589417 UQCRQO14949 82 aa8.29□□□□□ -1.08
H3F3B-207ENST00000589417 J3QR89 54 aa8.26□□□□□ -1.09
H3F3B-207ENST00000589417 A0A087WVE0 104 aa8.25□□□□□ -1.09
H3F3B-207ENST00000589417 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
H3F3B-207ENST00000589417 ATOX1O00244 68 aa8.23□□□□□ -1.09
H3F3B-207ENST00000589417 S4R3F8 94 aa8.21□□□□□ -1.1
H3F3B-207ENST00000589417 H0Y9P7 68 aa8.19□□□□□ -1.1
H3F3B-207ENST00000589417 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
H3F3B-207ENST00000589417 LCA10Q71F78 164 aa8.17□□□□□ -1.1
H3F3B-207ENST00000589417 OCR1Q9BZK8 76 aa8.17□□□□□ -1.1
H3F3B-207ENST00000589417 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
H3F3B-207ENST00000589417 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
H3F3B-207ENST00000589417 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
H3F3B-207ENST00000589417 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
H3F3B-207ENST00000589417 MP68P56378 58 aa8.07□□□□□ -1.12
H3F3B-207ENST00000589417 A8MUN3 132 aa8.05□□□□□ -1.12
H3F3B-207ENST00000589417 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
H3F3B-207ENST00000589417 H3BPC8 53 aa8.04□□□□□ -1.12
H3F3B-207ENST00000589417 KRTAP19-6Q3LI70 58 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms