RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 A8MWP4 228 aa6.66□□□□□ -1.34
DNMT1-218ENST00000589294 BPY2O14599 106 aa6.66□□□□□ -1.34
DNMT1-218ENST00000589294 LINC00313P59037 77 aa6.66□□□□□ -1.34
DNMT1-218ENST00000589294 J3QR89 54 aa6.65□□□□□ -1.34
DNMT1-218ENST00000589294 XP32Q5T750 250 aa6.65□□□□□ -1.34
DNMT1-218ENST00000589294 IGHV6-1A0A0B4J1U7 121 aa6.64□□□□□ -1.35
DNMT1-218ENST00000589294 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
DNMT1-218ENST00000589294 C8orf87E5RJ46 101 aa6.63□□□□□ -1.35
DNMT1-218ENST00000589294 DSCR10P59022 87 aa6.63□□□□□ -1.35
DNMT1-218ENST00000589294 PRR15Q8IV56 129 aa6.63□□□□□ -1.35
DNMT1-218ENST00000589294 CXCL6P80162 114 aa6.6□□□□□ -1.35
DNMT1-218ENST00000589294 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
DNMT1-218ENST00000589294 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
DNMT1-218ENST00000589294 K7EQZ3 153 aa6.57□□□□□ -1.36
DNMT1-218ENST00000589294 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
DNMT1-218ENST00000589294 Q75L30 129 aa6.57□□□□□ -1.36
DNMT1-218ENST00000589294 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
DNMT1-218ENST00000589294 C8orf17Q9NRJ1 99 aa6.57□□□□□ -1.36
DNMT1-218ENST00000589294 A8MUU9 505 aa6.56□□□□□ -1.36
DNMT1-218ENST00000589294 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
DNMT1-218ENST00000589294 RPL37P61927 97 aaKnown RBP6.56□□□□□ -1.36
DNMT1-218ENST00000589294 K7ERU9 68 aa6.55□□□□□ -1.36
DNMT1-218ENST00000589294 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
DNMT1-218ENST00000589294 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
DNMT1-218ENST00000589294 Q8N9L7 120 aa6.54□□□□□ -1.36
DNMT1-218ENST00000589294 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
DNMT1-218ENST00000589294 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
DNMT1-218ENST00000589294 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
DNMT1-218ENST00000589294 ATP11AUNQ6ZP68 121 aa6.51□□□□□ -1.37
DNMT1-218ENST00000589294 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
DNMT1-218ENST00000589294 TMEM254Q8TBM7 123 aa6.51□□□□□ -1.37
DNMT1-218ENST00000589294 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
DNMT1-218ENST00000589294 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
DNMT1-218ENST00000589294 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
DNMT1-218ENST00000589294 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
DNMT1-218ENST00000589294 HCG22E2RYF7 251 aa6.47□□□□□ -1.37
DNMT1-218ENST00000589294 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
DNMT1-218ENST00000589294 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
DNMT1-218ENST00000589294 MUC2Q02817 5179 aa6.44□□□□□ -1.38
DNMT1-218ENST00000589294 NDUFS5O43920 106 aa6.41□□□□□ -1.38
DNMT1-218ENST00000589294 ZCCHC13Q8WW36 166 aaKnown RBP6.41□□□□□ -1.38
DNMT1-218ENST00000589294 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
DNMT1-218ENST00000589294 IMUPQ9GZP8 106 aa6.38□□□□□ -1.39
DNMT1-218ENST00000589294 TP53AIP1Q9HCN2 124 aa6.37□□□□□ -1.39
DNMT1-218ENST00000589294 A0A087WVE0 104 aa6.36□□□□□ -1.39
DNMT1-218ENST00000589294 MT-ATP8P03928 68 aa6.34□□□□□ -1.39
DNMT1-218ENST00000589294 Q5W150 140 aa6.32□□□□□ -1.4
DNMT1-218ENST00000589294 SPINK7P58062 85 aa6.3□□□□□ -1.4
DNMT1-218ENST00000589294 A0A0U1RQV1 116 aa6.29□□□□□ -1.4
DNMT1-218ENST00000589294 UQCRQO14949 82 aa6.27□□□□□ -1.41
DNMT1-218ENST00000589294 SCGB1A1P11684 91 aa6.26□□□□□ -1.41
DNMT1-218ENST00000589294 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
DNMT1-218ENST00000589294 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
DNMT1-218ENST00000589294 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
DNMT1-218ENST00000589294 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
DNMT1-218ENST00000589294 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
DNMT1-218ENST00000589294 HRES1P13985 223 aa6.22□□□□□ -1.41
DNMT1-218ENST00000589294 ATOX1O00244 68 aa6.21□□□□□ -1.42
DNMT1-218ENST00000589294 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
DNMT1-218ENST00000589294 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 C5orf47Q569G3 176 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 SMIM20Q8N5G0 67 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 RBM12B-AS1Q9P1G2 102 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
DNMT1-218ENST00000589294 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
DNMT1-218ENST00000589294 H0Y9P7 68 aa6.18□□□□□ -1.42
DNMT1-218ENST00000589294 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
DNMT1-218ENST00000589294 MP68P56378 58 aa6.17□□□□□ -1.42
DNMT1-218ENST00000589294 COX6B2Q6YFQ2 88 aa6.17□□□□□ -1.42
DNMT1-218ENST00000589294 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
DNMT1-218ENST00000589294 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.42
DNMT1-218ENST00000589294 H3BPC8 53 aa6.14□□□□□ -1.43
DNMT1-218ENST00000589294 C1orf64Q8NEQ6 169 aa6.14□□□□□ -1.43
DNMT1-218ENST00000589294 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
DNMT1-218ENST00000589294 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
DNMT1-218ENST00000589294 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
DNMT1-218ENST00000589294 LINC00208Q96KT6 92 aa6.12□□□□□ -1.43
DNMT1-218ENST00000589294 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
DNMT1-218ENST00000589294 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
DNMT1-218ENST00000589294 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
DNMT1-218ENST00000589294 MT1HP80294 61 aa6.06□□□□□ -1.44
DNMT1-218ENST00000589294 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
DNMT1-218ENST00000589294 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
DNMT1-218ENST00000589294 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
DNMT1-218ENST00000589294 M0R2T5 61 aa6□□□□□ -1.45
DNMT1-218ENST00000589294 COX7CP15954 63 aa5.97□□□□□ -1.45
DNMT1-218ENST00000589294 C20orf197Q8N268 126 aa5.97□□□□□ -1.45
DNMT1-218ENST00000589294 A8MUN3 132 aa5.96□□□□□ -1.46
DNMT1-218ENST00000589294 SNURFQ9Y675 71 aa5.95□□□□□ -1.46
DNMT1-218ENST00000589294 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
DNMT1-218ENST00000589294 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.46
DNMT1-218ENST00000589294 S4R3F8 94 aa5.9□□□□□ -1.46
DNMT1-218ENST00000589294 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
DNMT1-218ENST00000589294 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
DNMT1-218ENST00000589294 NDUFC1O43677 76 aa5.87□□□□□ -1.47
DNMT1-218ENST00000589294 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
DNMT1-218ENST00000589294 LCA10Q71F78 164 aa5.86□□□□□ -1.47
DNMT1-218ENST00000589294 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms