RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 MPLKIPQ8TAP9 179 aa9.69□□□□□ -0.86
CCDC130-209ENST00000588809 J3KT08 172 aa9.68□□□□□ -0.86
CCDC130-209ENST00000588809 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
CCDC130-209ENST00000588809 HRES1P13985 223 aa9.66□□□□□ -0.86
CCDC130-209ENST00000588809 KRTAP9-8Q9BYQ0 159 aa9.66□□□□□ -0.86
CCDC130-209ENST00000588809 JMJD7-PLA2G4BH0Y9G9 81 aa9.65□□□□□ -0.86
CCDC130-209ENST00000588809 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
CCDC130-209ENST00000588809 NAA38Q9BRA0 125 aaKnown RBP9.65□□□□□ -0.86
CCDC130-209ENST00000588809 LOC110117498A0A087WWA1 95 aa9.64□□□□□ -0.87
CCDC130-209ENST00000588809 A0A1B0GW54 56 aa9.64□□□□□ -0.87
CCDC130-209ENST00000588809 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
CCDC130-209ENST00000588809 FAM236DA0A1B0GTK5 79 aa9.6□□□□□ -0.87
CCDC130-209ENST00000588809 FAM236CP0DP71 79 aa9.6□□□□□ -0.87
CCDC130-209ENST00000588809 PDE6GP18545 87 aa9.6□□□□□ -0.87
CCDC130-209ENST00000588809 NDUFB1O75438 58 aa9.58□□□□□ -0.88
CCDC130-209ENST00000588809 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
CCDC130-209ENST00000588809 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
CCDC130-209ENST00000588809 LYRM7Q5U5X0 104 aa9.57□□□□□ -0.88
CCDC130-209ENST00000588809 A8MWP4 228 aa9.56□□□□□ -0.88
CCDC130-209ENST00000588809 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
CCDC130-209ENST00000588809 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
CCDC130-209ENST00000588809 TSTD3H0UI37 97 aa9.52□□□□□ -0.89
CCDC130-209ENST00000588809 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.89
CCDC130-209ENST00000588809 MT2AP02795 61 aa9.5□□□□□ -0.89
CCDC130-209ENST00000588809 SPINK7P58062 85 aa9.5□□□□□ -0.89
CCDC130-209ENST00000588809 USH2AO75445 5202 aa9.48□□□□□ -0.89
CCDC130-209ENST00000588809 MTURNQ8N3F0 131 aa9.48□□□□□ -0.89
CCDC130-209ENST00000588809 BATFQ16520 125 aa9.46□□□□□ -0.9
CCDC130-209ENST00000588809 PRR15Q8IV56 129 aa9.46□□□□□ -0.9
CCDC130-209ENST00000588809 NREPQ16612 68 aa9.45□□□□□ -0.9
CCDC130-209ENST00000588809 Q6ZVQ6 151 aa9.45□□□□□ -0.9
CCDC130-209ENST00000588809 H3BT86 120 aa9.43□□□□□ -0.9
CCDC130-209ENST00000588809 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
CCDC130-209ENST00000588809 MT1FP04733 61 aa9.42□□□□□ -0.9
CCDC130-209ENST00000588809 SSPOA2VEC9 5147 aa9.42□□□□□ -0.9
CCDC130-209ENST00000588809 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
CCDC130-209ENST00000588809 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
CCDC130-209ENST00000588809 TAX1BP3O14907 124 aa9.39□□□□□ -0.91
CCDC130-209ENST00000588809 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
CCDC130-209ENST00000588809 LOC105371267A0A1B0GV96 52 aa9.37□□□□□ -0.91
CCDC130-209ENST00000588809 MRPL34Q9BQ48 92 aaKnown RBP9.37□□□□□ -0.91
CCDC130-209ENST00000588809 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
CCDC130-209ENST00000588809 K7EQZ3 153 aa9.35□□□□□ -0.91
CCDC130-209ENST00000588809 KRTAP9-3Q9BYQ3 159 aa9.35□□□□□ -0.91
CCDC130-209ENST00000588809 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
CCDC130-209ENST00000588809 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
CCDC130-209ENST00000588809 LCE2BO14633 110 aa9.31□□□□□ -0.92
CCDC130-209ENST00000588809 BPY2O14599 106 aa9.28□□□□□ -0.92
CCDC130-209ENST00000588809 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
CCDC130-209ENST00000588809 NDUFS5O43920 106 aa9.23□□□□□ -0.93
CCDC130-209ENST00000588809 FCGBPQ9Y6R7 5405 aaPredicted RBP9.21□□□□□ -0.93
CCDC130-209ENST00000588809 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
CCDC130-209ENST00000588809 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
CCDC130-209ENST00000588809 Q5W150 140 aa9.19□□□□□ -0.94
CCDC130-209ENST00000588809 H1FX-AS1Q4G0G2 97 aa9.18□□□□□ -0.94
CCDC130-209ENST00000588809 Q8N9L7 120 aa9.18□□□□□ -0.94
CCDC130-209ENST00000588809 CASC2Q6XLA1 102 aa9.16□□□□□ -0.94
CCDC130-209ENST00000588809 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
CCDC130-209ENST00000588809 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
CCDC130-209ENST00000588809 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
CCDC130-209ENST00000588809 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
CCDC130-209ENST00000588809 PRO0461Q9UI25 63 aa9.14□□□□□ -0.95
CCDC130-209ENST00000588809 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
CCDC130-209ENST00000588809 HCG22E2RYF7 251 aa9.11□□□□□ -0.95
CCDC130-209ENST00000588809 LINC00846Q9NV44 126 aa9.1□□□□□ -0.95
CCDC130-209ENST00000588809 KRTAP9-7A8MTY7 169 aa9.09□□□□□ -0.95
CCDC130-209ENST00000588809 CXCL6P80162 114 aa9.09□□□□□ -0.95
CCDC130-209ENST00000588809 K7EP34 96 aa9.08□□□□□ -0.96
CCDC130-209ENST00000588809 UBL5Q9BZL1 73 aa9.08□□□□□ -0.96
CCDC130-209ENST00000588809 KRTAP19-6Q3LI70 58 aa9.02□□□□□ -0.97
CCDC130-209ENST00000588809 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
CCDC130-209ENST00000588809 MACF1Q9UPN3 7388 aaKnown RBP8.99□□□□□ -0.97
CCDC130-209ENST00000588809 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
CCDC130-209ENST00000588809 F8W1H4 67 aa8.92□□□□□ -0.98
CCDC130-209ENST00000588809 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
CCDC130-209ENST00000588809 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
CCDC130-209ENST00000588809 ETDBQ3ZM63 59 aa8.88□□□□□ -0.99
CCDC130-209ENST00000588809 SYNE2Q8WXH0 6885 aaKnown RBP8.87□□□□□ -0.99
CCDC130-209ENST00000588809 C5orf47Q569G3 176 aa8.84□□□□□ -0.99
CCDC130-209ENST00000588809 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
CCDC130-209ENST00000588809 S4R3F8 94 aa8.83□□□□□ -1
CCDC130-209ENST00000588809 PCP4L1A6NKN8 68 aa8.82□□□□□ -1
CCDC130-209ENST00000588809 LCA10Q71F78 164 aa8.78□□□□□ -1
CCDC130-209ENST00000588809 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
CCDC130-209ENST00000588809 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
CCDC130-209ENST00000588809 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
CCDC130-209ENST00000588809 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
CCDC130-209ENST00000588809 ACYP1P07311 99 aa8.71□□□□□ -1.02
CCDC130-209ENST00000588809 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
CCDC130-209ENST00000588809 FAM240AA0A1B0GVK7 77 aa8.68□□□□□ -1.02
CCDC130-209ENST00000588809 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
CCDC130-209ENST00000588809 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
CCDC130-209ENST00000588809 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
CCDC130-209ENST00000588809 ATP5EP2Q5VTU8 51 aa8.66□□□□□ -1.02
CCDC130-209ENST00000588809 MT1BP07438 61 aa8.64□□□□□ -1.03
CCDC130-209ENST00000588809 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
CCDC130-209ENST00000588809 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
CCDC130-209ENST00000588809 Q5VV11 94 aa8.6□□□□□ -1.03
CCDC130-209ENST00000588809 KRTAP6-3Q3LI67 103 aa8.59□□□□□ -1.03
CCDC130-209ENST00000588809 A0A087WVE0 104 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms