RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
SPIDR-228ENST00000588781 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
SPIDR-228ENST00000588781 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
SPIDR-228ENST00000588781 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
SPIDR-228ENST00000588781 NDUFS5O43920 106 aa4.29□□□□□ -1.72
SPIDR-228ENST00000588781 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
SPIDR-228ENST00000588781 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
SPIDR-228ENST00000588781 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
SPIDR-228ENST00000588781 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
SPIDR-228ENST00000588781 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
SPIDR-228ENST00000588781 CIRBP-AS1Q8TBR5 109 aa4.26□□□□□ -1.73
SPIDR-228ENST00000588781 HERC1Q15751 4861 aa4.26□□□□□ -1.73
SPIDR-228ENST00000588781 PRR4Q16378 134 aa4.25□□□□□ -1.73
SPIDR-228ENST00000588781 KMT2AQ03164 3969 aa4.24□□□□□ -1.73
SPIDR-228ENST00000588781 LINC00336Q6ZUF6 198 aa4.24□□□□□ -1.73
SPIDR-228ENST00000588781 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SPIDR-228ENST00000588781 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
SPIDR-228ENST00000588781 C4orf48Q5BLP8 95 aa4.22□□□□□ -1.73
SPIDR-228ENST00000588781 SPINK6Q6UWN8 80 aa4.22□□□□□ -1.73
SPIDR-228ENST00000588781 Q6ZSA8 131 aa4.22□□□□□ -1.73
SPIDR-228ENST00000588781 ANAPC11Q9NYG5 84 aa4.22□□□□□ -1.73
SPIDR-228ENST00000588781 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
SPIDR-228ENST00000588781 VPS13DQ5THJ4 4388 aa4.21□□□□□ -1.73
SPIDR-228ENST00000588781 FAM229AH3BQW9 127 aa4.21□□□□□ -1.74
SPIDR-228ENST00000588781 LINC00313P59037 77 aa4.21□□□□□ -1.74
SPIDR-228ENST00000588781 PCOTHQ58A44 107 aa4.21□□□□□ -1.74
SPIDR-228ENST00000588781 COA5Q86WW8 74 aa4.21□□□□□ -1.74
SPIDR-228ENST00000588781 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
SPIDR-228ENST00000588781 DNAH6Q9C0G6 4158 aa4.18□□□□□ -1.74
SPIDR-228ENST00000588781 FAT2Q9NYQ8 4349 aa4.18□□□□□ -1.74
SPIDR-228ENST00000588781 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
SPIDR-228ENST00000588781 DNAH17Q9UFH2 4485 aa4.17□□□□□ -1.74
SPIDR-228ENST00000588781 PSPHP1O15172 72 aa4.17□□□□□ -1.74
SPIDR-228ENST00000588781 ACYP2P14621 99 aa4.17□□□□□ -1.74
SPIDR-228ENST00000588781 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
SPIDR-228ENST00000588781 HSPG2P98160 4391 aa4.17□□□□□ -1.74
SPIDR-228ENST00000588781 PKD1P98161 4303 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 SPINK1P00995 79 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
SPIDR-228ENST00000588781 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 PRR15LQ9BU68 103 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 DNAH2Q9P225 4427 aa4.16□□□□□ -1.74
SPIDR-228ENST00000588781 A8MUN3 132 aa4.15□□□□□ -1.75
SPIDR-228ENST00000588781 Q75L30 129 aa4.15□□□□□ -1.75
SPIDR-228ENST00000588781 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
SPIDR-228ENST00000588781 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
SPIDR-228ENST00000588781 A0A087X002 238 aa4.14□□□□□ -1.75
SPIDR-228ENST00000588781 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
SPIDR-228ENST00000588781 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
SPIDR-228ENST00000588781 KRTAP13-2Q52LG2 175 aa4.14□□□□□ -1.75
SPIDR-228ENST00000588781 NOTCH2NLQ7Z3S9 236 aa4.14□□□□□ -1.75
SPIDR-228ENST00000588781 UBR4Q5T4S7 5183 aa4.14□□□□□ -1.75
SPIDR-228ENST00000588781 Q5VV11 94 aa4.13□□□□□ -1.75
SPIDR-228ENST00000588781 PLA2G1BP04054 148 aaKnown RBP4.12□□□□□ -1.75
SPIDR-228ENST00000588781 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
SPIDR-228ENST00000588781 HRES1P13985 223 aa4.12□□□□□ -1.75
SPIDR-228ENST00000588781 Q5W150 140 aa4.12□□□□□ -1.75
SPIDR-228ENST00000588781 KRTAP1-4P0C5Y4 121 aa4.11□□□□□ -1.75
SPIDR-228ENST00000588781 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
SPIDR-228ENST00000588781 A6NED7 52 aa4.1□□□□□ -1.75
SPIDR-228ENST00000588781 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
SPIDR-228ENST00000588781 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
SPIDR-228ENST00000588781 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
SPIDR-228ENST00000588781 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
SPIDR-228ENST00000588781 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
SPIDR-228ENST00000588781 ATP11AUNQ6ZP68 121 aa4.07□□□□□ -1.76
SPIDR-228ENST00000588781 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
SPIDR-228ENST00000588781 DNAH8Q96JB1 4490 aa4.05□□□□□ -1.76
SPIDR-228ENST00000588781 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
SPIDR-228ENST00000588781 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
SPIDR-228ENST00000588781 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
SPIDR-228ENST00000588781 APOBP04114 4563 aaKnown RBP4.04□□□□□ -1.76
SPIDR-228ENST00000588781 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
SPIDR-228ENST00000588781 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
SPIDR-228ENST00000588781 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
SPIDR-228ENST00000588781 LRP1BQ9NZR2 4599 aa4.03□□□□□ -1.76
SPIDR-228ENST00000588781 A0A1B0GU69 56 aa4.02□□□□□ -1.77
SPIDR-228ENST00000588781 MYCBP2O75592 4640 aa4□□□□□ -1.77
SPIDR-228ENST00000588781 SEC61GP60059 68 aa3.99□□□□□ -1.77
SPIDR-228ENST00000588781 LCA10Q71F78 164 aa3.99□□□□□ -1.77
SPIDR-228ENST00000588781 A8MUU9 505 aa3.98□□□□□ -1.77
SPIDR-228ENST00000588781 Q8N1X5 172 aa3.98□□□□□ -1.77
SPIDR-228ENST00000588781 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
SPIDR-228ENST00000588781 DNAH5Q8TE73 4624 aa3.97□□□□□ -1.77
SPIDR-228ENST00000588781 UQCR11O14957 56 aa3.96□□□□□ -1.78
SPIDR-228ENST00000588781 SPINK7P58062 85 aa3.96□□□□□ -1.78
SPIDR-228ENST00000588781 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
SPIDR-228ENST00000588781 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
SPIDR-228ENST00000588781 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
SPIDR-228ENST00000588781 SMR3BP02814 79 aaPredicted RBP3.95□□□□□ -1.78
SPIDR-228ENST00000588781 FAT1Q14517 4588 aa3.94□□□□□ -1.78
SPIDR-228ENST00000588781 A6NN06 94 aa3.93□□□□□ -1.78
SPIDR-228ENST00000588781 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
SPIDR-228ENST00000588781 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
SPIDR-228ENST00000588781 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
SPIDR-228ENST00000588781 C9orf92A6NGG3 77 aa3.9□□□□□ -1.79
SPIDR-228ENST00000588781 A8MU10 97 aa3.89□□□□□ -1.79
SPIDR-228ENST00000588781 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms