RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
VMP1-207ENST00000588131 Q5XG85 94 aa6.46□□□□□ -1.38
VMP1-207ENST00000588131 Q96NJ1 140 aa6.46□□□□□ -1.38
VMP1-207ENST00000588131 LIMD2Q9BT23 127 aa6.46□□□□□ -1.38
VMP1-207ENST00000588131 SS18L2Q9UHA2 77 aa6.46□□□□□ -1.38
VMP1-207ENST00000588131 DEFB116Q30KQ4 102 aa6.45□□□□□ -1.38
VMP1-207ENST00000588131 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
VMP1-207ENST00000588131 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
VMP1-207ENST00000588131 LINC00643Q86TS7 51 aa6.42□□□□□ -1.38
VMP1-207ENST00000588131 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
VMP1-207ENST00000588131 C1orf195Q5TG92 126 aa6.41□□□□□ -1.38
VMP1-207ENST00000588131 BPY2O14599 106 aa6.4□□□□□ -1.38
VMP1-207ENST00000588131 IGKV4-1P06312 121 aa6.39□□□□□ -1.39
VMP1-207ENST00000588131 DSCR10P59022 87 aa6.39□□□□□ -1.39
VMP1-207ENST00000588131 SIGMAR1Q99720 223 aa6.39□□□□□ -1.39
VMP1-207ENST00000588131 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
VMP1-207ENST00000588131 J3KT08 172 aa6.37□□□□□ -1.39
VMP1-207ENST00000588131 MT-ATP8P03928 68 aa6.37□□□□□ -1.39
VMP1-207ENST00000588131 CXCL6P80162 114 aa6.37□□□□□ -1.39
VMP1-207ENST00000588131 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
VMP1-207ENST00000588131 Q8N9L7 120 aa6.37□□□□□ -1.39
VMP1-207ENST00000588131 A8MWP4 228 aa6.34□□□□□ -1.39
VMP1-207ENST00000588131 K7EQZ3 153 aa6.34□□□□□ -1.39
VMP1-207ENST00000588131 DMBT1Q9UGM3 2413 aaPredicted RBP6.32□□□□□ -1.4
VMP1-207ENST00000588131 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
VMP1-207ENST00000588131 PRR15Q8IV56 129 aa6.31□□□□□ -1.4
VMP1-207ENST00000588131 A0A087WVE0 104 aa6.3□□□□□ -1.4
VMP1-207ENST00000588131 NDUFB1O75438 58 aa6.3□□□□□ -1.4
VMP1-207ENST00000588131 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
VMP1-207ENST00000588131 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
VMP1-207ENST00000588131 FP248Q71RG6 208 aaPredicted RBP6.28□□□□□ -1.4
VMP1-207ENST00000588131 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
VMP1-207ENST00000588131 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
VMP1-207ENST00000588131 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
VMP1-207ENST00000588131 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
VMP1-207ENST00000588131 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
VMP1-207ENST00000588131 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
VMP1-207ENST00000588131 PRR4Q16378 134 aa6.25□□□□□ -1.41
VMP1-207ENST00000588131 WFDC13Q8IUB5 93 aa6.24□□□□□ -1.41
VMP1-207ENST00000588131 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
VMP1-207ENST00000588131 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
VMP1-207ENST00000588131 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
VMP1-207ENST00000588131 LINC00313P59037 77 aa6.22□□□□□ -1.41
VMP1-207ENST00000588131 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
VMP1-207ENST00000588131 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
VMP1-207ENST00000588131 hDV103S1A0JD37 113 aa6.2□□□□□ -1.42
VMP1-207ENST00000588131 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
VMP1-207ENST00000588131 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
VMP1-207ENST00000588131 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
VMP1-207ENST00000588131 TMEM254Q8TBM7 123 aa6.18□□□□□ -1.42
VMP1-207ENST00000588131 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
VMP1-207ENST00000588131 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
VMP1-207ENST00000588131 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
VMP1-207ENST00000588131 LPAP08519 4548 aa6.15□□□□□ -1.43
VMP1-207ENST00000588131 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
VMP1-207ENST00000588131 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
VMP1-207ENST00000588131 H3BS24 57 aa6.12□□□□□ -1.43
VMP1-207ENST00000588131 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
VMP1-207ENST00000588131 A8MUU9 505 aa6.11□□□□□ -1.43
VMP1-207ENST00000588131 NDUFS5O43920 106 aa6.11□□□□□ -1.43
VMP1-207ENST00000588131 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
VMP1-207ENST00000588131 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
VMP1-207ENST00000588131 ATOX1O00244 68 aa6.08□□□□□ -1.44
VMP1-207ENST00000588131 Q75L30 129 aa6.08□□□□□ -1.44
VMP1-207ENST00000588131 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
VMP1-207ENST00000588131 Q5W150 140 aa6.05□□□□□ -1.44
VMP1-207ENST00000588131 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
VMP1-207ENST00000588131 RNF213Q63HN8 5207 aa6.05□□□□□ -1.44
VMP1-207ENST00000588131 TRAV7A0A075B6U4 112 aa6.04□□□□□ -1.44
VMP1-207ENST00000588131 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
VMP1-207ENST00000588131 UQCRQO14949 82 aa6.03□□□□□ -1.44
VMP1-207ENST00000588131 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
VMP1-207ENST00000588131 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
VMP1-207ENST00000588131 LRP2P98164 4655 aa6.02□□□□□ -1.45
VMP1-207ENST00000588131 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
VMP1-207ENST00000588131 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
VMP1-207ENST00000588131 ANAPC13Q9BS18 74 aa6□□□□□ -1.45
VMP1-207ENST00000588131 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
VMP1-207ENST00000588131 H0Y9P7 68 aa5.99□□□□□ -1.45
VMP1-207ENST00000588131 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
VMP1-207ENST00000588131 ATP11AUNQ6ZP68 121 aa5.99□□□□□ -1.45
VMP1-207ENST00000588131 PCOTHQ58A44 107 aa5.98□□□□□ -1.45
VMP1-207ENST00000588131 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
VMP1-207ENST00000588131 COX7CP15954 63 aa5.97□□□□□ -1.45
VMP1-207ENST00000588131 C5orf47Q569G3 176 aa5.96□□□□□ -1.46
VMP1-207ENST00000588131 MP68P56378 58 aa5.95□□□□□ -1.46
VMP1-207ENST00000588131 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
VMP1-207ENST00000588131 LINC00208Q96KT6 92 aa5.94□□□□□ -1.46
VMP1-207ENST00000588131 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
VMP1-207ENST00000588131 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
VMP1-207ENST00000588131 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
VMP1-207ENST00000588131 C1orf64Q8NEQ6 169 aa5.92□□□□□ -1.46
VMP1-207ENST00000588131 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
VMP1-207ENST00000588131 CCDC179H3BU77 68 aa5.91□□□□□ -1.46
VMP1-207ENST00000588131 SNURFQ9Y675 71 aa5.91□□□□□ -1.46
VMP1-207ENST00000588131 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.46
VMP1-207ENST00000588131 H3BPC8 53 aa5.9□□□□□ -1.46
VMP1-207ENST00000588131 SPINK7P58062 85 aa5.89□□□□□ -1.47
VMP1-207ENST00000588131 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
VMP1-207ENST00000588131 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms