RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 CRCT1Q9UGL9 99 aa10.18□□□□□ -0.78
TRAPPC6A-203ENST00000587818 BATFQ16520 125 aa10.17□□□□□ -0.78
TRAPPC6A-203ENST00000587818 C8orf87E5RJ46 101 aa10.15□□□□□ -0.78
TRAPPC6A-203ENST00000587818 JMJD7-PLA2G4BH0Y9G9 81 aa10.14□□□□□ -0.79
TRAPPC6A-203ENST00000587818 J3KT08 172 aa10.12□□□□□ -0.79
TRAPPC6A-203ENST00000587818 C14orf132Q9NPU4 83 aa10.12□□□□□ -0.79
TRAPPC6A-203ENST00000587818 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
TRAPPC6A-203ENST00000587818 TSTD3H0UI37 97 aa10.11□□□□□ -0.79
TRAPPC6A-203ENST00000587818 C21orf62-AS1Q17RA5 79 aa10.11□□□□□ -0.79
TRAPPC6A-203ENST00000587818 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
TRAPPC6A-203ENST00000587818 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
TRAPPC6A-203ENST00000587818 HRES1P13985 223 aa10.09□□□□□ -0.79
TRAPPC6A-203ENST00000587818 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
TRAPPC6A-203ENST00000587818 NDUFB1O75438 58 aa10.07□□□□□ -0.8
TRAPPC6A-203ENST00000587818 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
TRAPPC6A-203ENST00000587818 PDE6GP18545 87 aa10.05□□□□□ -0.8
TRAPPC6A-203ENST00000587818 MPLKIPQ8TAP9 179 aa10.04□□□□□ -0.8
TRAPPC6A-203ENST00000587818 ZCCHC13Q8WW36 166 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6A-203ENST00000587818 IGKV3D-7A0A0C4DH55 119 aa10.03□□□□□ -0.8
TRAPPC6A-203ENST00000587818 C8orf17Q9NRJ1 99 aa10.03□□□□□ -0.8
TRAPPC6A-203ENST00000587818 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
TRAPPC6A-203ENST00000587818 A0A1B0GW54 56 aa10.02□□□□□ -0.81
TRAPPC6A-203ENST00000587818 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
TRAPPC6A-203ENST00000587818 A8MWP4 228 aa10.02□□□□□ -0.81
TRAPPC6A-203ENST00000587818 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
TRAPPC6A-203ENST00000587818 TAX1BP3O14907 124 aa10.01□□□□□ -0.81
TRAPPC6A-203ENST00000587818 MTURNQ8N3F0 131 aa10.01□□□□□ -0.81
TRAPPC6A-203ENST00000587818 NREPQ16612 68 aa10□□□□□ -0.81
TRAPPC6A-203ENST00000587818 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC6A-203ENST00000587818 SPINK7P58062 85 aa9.98□□□□□ -0.81
TRAPPC6A-203ENST00000587818 A0A1W2PPM0 123 aa9.96□□□□□ -0.82
TRAPPC6A-203ENST00000587818 PRR15Q8IV56 129 aa9.94□□□□□ -0.82
TRAPPC6A-203ENST00000587818 Q6ZVQ6 151 aa9.93□□□□□ -0.82
TRAPPC6A-203ENST00000587818 H3BT86 120 aa9.92□□□□□ -0.82
TRAPPC6A-203ENST00000587818 MT2AP02795 61 aa9.88□□□□□ -0.83
TRAPPC6A-203ENST00000587818 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
TRAPPC6A-203ENST00000587818 USH2AO75445 5202 aa9.85□□□□□ -0.83
TRAPPC6A-203ENST00000587818 K7EQZ3 153 aa9.85□□□□□ -0.83
TRAPPC6A-203ENST00000587818 MRPL34Q9BQ48 92 aaKnown RBP9.85□□□□□ -0.83
TRAPPC6A-203ENST00000587818 SPCS1Q9Y6A9 102 aa9.84□□□□□ -0.83
TRAPPC6A-203ENST00000587818 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
TRAPPC6A-203ENST00000587818 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
TRAPPC6A-203ENST00000587818 hDV103S1A0JD37 113 aa9.8□□□□□ -0.84
TRAPPC6A-203ENST00000587818 BPY2O14599 106 aa9.8□□□□□ -0.84
TRAPPC6A-203ENST00000587818 MT1FP04733 61 aa9.8□□□□□ -0.84
TRAPPC6A-203ENST00000587818 SMCPP49901 116 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC6A-203ENST00000587818 NDUFS5O43920 106 aa9.79□□□□□ -0.84
TRAPPC6A-203ENST00000587818 KRTAP10-10P60014 251 aa9.76□□□□□ -0.85
TRAPPC6A-203ENST00000587818 Q8N9L7 120 aa9.76□□□□□ -0.85
TRAPPC6A-203ENST00000587818 SSPOA2VEC9 5147 aa9.75□□□□□ -0.85
TRAPPC6A-203ENST00000587818 COL5A1-AS1Q5SY13 56 aa9.71□□□□□ -0.86
TRAPPC6A-203ENST00000587818 Q5W150 140 aa9.71□□□□□ -0.86
TRAPPC6A-203ENST00000587818 KRTAP9-3Q9BYQ3 159 aa9.7□□□□□ -0.86
TRAPPC6A-203ENST00000587818 LCE2BO14633 110 aa9.69□□□□□ -0.86
TRAPPC6A-203ENST00000587818 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
TRAPPC6A-203ENST00000587818 IGKV2D-30A0A075B6S6 120 aa9.66□□□□□ -0.86
TRAPPC6A-203ENST00000587818 K7EP34 96 aa9.66□□□□□ -0.86
TRAPPC6A-203ENST00000587818 IGKV2-30P06310 120 aa9.66□□□□□ -0.86
TRAPPC6A-203ENST00000587818 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
TRAPPC6A-203ENST00000587818 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
TRAPPC6A-203ENST00000587818 HCG22E2RYF7 251 aa9.64□□□□□ -0.87
TRAPPC6A-203ENST00000587818 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
TRAPPC6A-203ENST00000587818 H1FX-AS1Q4G0G2 97 aa9.6□□□□□ -0.87
TRAPPC6A-203ENST00000587818 UBL5Q9BZL1 73 aa9.58□□□□□ -0.88
TRAPPC6A-203ENST00000587818 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
TRAPPC6A-203ENST00000587818 PCP4L1A6NKN8 68 aa9.56□□□□□ -0.88
TRAPPC6A-203ENST00000587818 CXCL6P80162 114 aa9.52□□□□□ -0.89
TRAPPC6A-203ENST00000587818 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
TRAPPC6A-203ENST00000587818 C4orf26Q17RF5 130 aa9.51□□□□□ -0.89
TRAPPC6A-203ENST00000587818 GTF2H5Q6ZYL4 71 aa9.5□□□□□ -0.89
TRAPPC6A-203ENST00000587818 FCGBPQ9Y6R7 5405 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC6A-203ENST00000587818 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC6A-203ENST00000587818 ETDBQ3ZM63 59 aa9.47□□□□□ -0.89
TRAPPC6A-203ENST00000587818 F8W1H4 67 aa9.45□□□□□ -0.9
TRAPPC6A-203ENST00000587818 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
TRAPPC6A-203ENST00000587818 C5orf47Q569G3 176 aa9.33□□□□□ -0.92
TRAPPC6A-203ENST00000587818 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
TRAPPC6A-203ENST00000587818 TP53AIP1Q9HCN2 124 aa9.31□□□□□ -0.92
TRAPPC6A-203ENST00000587818 KRTAP19-6Q3LI70 58 aa9.29□□□□□ -0.92
TRAPPC6A-203ENST00000587818 S4R3F8 94 aa9.25□□□□□ -0.93
TRAPPC6A-203ENST00000587818 LCA10Q71F78 164 aa9.21□□□□□ -0.94
TRAPPC6A-203ENST00000587818 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
TRAPPC6A-203ENST00000587818 CYP4F30PQ9H0H9 118 aa9.19□□□□□ -0.94
TRAPPC6A-203ENST00000587818 FAM236AA0A1B0GUQ0 79 aa9.18□□□□□ -0.94
TRAPPC6A-203ENST00000587818 FAM236BA0A1B0GV22 79 aa9.18□□□□□ -0.94
TRAPPC6A-203ENST00000587818 ACYP1P07311 99 aa9.18□□□□□ -0.94
TRAPPC6A-203ENST00000587818 MACF1Q9UPN3 7388 aaKnown RBP9.18□□□□□ -0.94
TRAPPC6A-203ENST00000587818 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
TRAPPC6A-203ENST00000587818 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
TRAPPC6A-203ENST00000587818 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
TRAPPC6A-203ENST00000587818 A0A087WVE0 104 aa9.11□□□□□ -0.95
TRAPPC6A-203ENST00000587818 FAM240AA0A1B0GVK7 77 aa9.1□□□□□ -0.95
TRAPPC6A-203ENST00000587818 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
TRAPPC6A-203ENST00000587818 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
TRAPPC6A-203ENST00000587818 ATP5EP2Q5VTU8 51 aa9.07□□□□□ -0.96
TRAPPC6A-203ENST00000587818 H0Y9P7 68 aa9.03□□□□□ -0.96
TRAPPC6A-203ENST00000587818 UQCRQO14949 82 aa9.03□□□□□ -0.96
TRAPPC6A-203ENST00000587818 A0A1B0GV90 55 aa9□□□□□ -0.97
TRAPPC6A-203ENST00000587818 MT1BP07438 61 aa9□□□□□ -0.97
TRAPPC6A-203ENST00000587818 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms