RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
TUBD1-207ENST00000587476 APC2O95996 2303 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 TRPM2O94759 1503 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 ACANP16112 2415 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 DEFB110Q30KQ9 67 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 NBASA2RRP1 2371 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 TNRC18O15417 2968 aaPredicted RBP0.14□□□□□ -2.39
TUBD1-207ENST00000587476 FAM208AQ9UK61 1670 aaKnown RBP0.14□□□□□ -2.39
TUBD1-207ENST00000587476 HUWE1Q7Z6Z7 4374 aaKnown RBP0.14□□□□□ -2.39
TUBD1-207ENST00000587476 PKD1L1Q8TDX9 2849 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 LPAP08519 4548 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 A8MTW9 85 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 TNP1P09430 55 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 KRTAP6-2Q3LI66 62 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 A0A1B0GUL6 1792 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 CEP290O15078 2479 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 PRRC2CQ9Y520 2896 aaKnown RBP0.13□□□□□ -2.39
TUBD1-207ENST00000587476 FLNCQ14315 2725 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 ATP7AQ04656 1500 aa0.13□□□□□ -2.39
TUBD1-207ENST00000587476 M0QZ58 72 aa0.12□□□□□ -2.39
TUBD1-207ENST00000587476 POLR2KP53803 58 aaKnown RBP0.12□□□□□ -2.39
TUBD1-207ENST00000587476 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
TUBD1-207ENST00000587476 PRKDCP78527 4128 aaKnown RBP0.11□□□□□ -2.39
TUBD1-207ENST00000587476 HSPG2P98160 4391 aa0.11□□□□□ -2.39
TUBD1-207ENST00000587476 SAMD9LQ8IVG5 1584 aa0.11□□□□□ -2.39
TUBD1-207ENST00000587476 SPRR2AP35326 72 aa0.11□□□□□ -2.39
TUBD1-207ENST00000587476 SNRPGP62308 76 aaKnown RBP0.11□□□□□ -2.39
TUBD1-207ENST00000587476 CLPSL2Q6UWE3 100 aa0.11□□□□□ -2.39
TUBD1-207ENST00000587476 MYCBP2O75592 4640 aa0.11□□□□□ -2.39
TUBD1-207ENST00000587476 SONP18583 2426 aaKnown RBP0.11□□□□□ -2.39
TUBD1-207ENST00000587476 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
TUBD1-207ENST00000587476 FLNBO75369 2602 aaKnown RBP0.1□□□□□ -2.39
TUBD1-207ENST00000587476 SPTBN4Q9H254 2564 aa0.1□□□□□ -2.39
TUBD1-207ENST00000587476 FLNAP21333 2647 aaKnown RBP0.1□□□□□ -2.39
TUBD1-207ENST00000587476 DDX60Q8IY21 1712 aaKnown RBP0.1□□□□□ -2.39
TUBD1-207ENST00000587476 MTORP42345 2549 aa0.1□□□□□ -2.39
TUBD1-207ENST00000587476 NF1P21359 2839 aa0.09□□□□□ -2.39
TUBD1-207ENST00000587476 HMCN2Q8NDA2 5059 aa0.09□□□□□ -2.39
TUBD1-207ENST00000587476 MT1AP04731 61 aa0.09□□□□□ -2.4
TUBD1-207ENST00000587476 SPART-AS1P0CW21 52 aa0.09□□□□□ -2.4
TUBD1-207ENST00000587476 RPL39P62891 51 aaKnown RBP0.09□□□□□ -2.4
TUBD1-207ENST00000587476 KMT2AQ03164 3969 aa0.09□□□□□ -2.4
TUBD1-207ENST00000587476 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.4
TUBD1-207ENST00000587476 ANKHD1Q8IWZ3 2542 aaKnown RBP0.09□□□□□ -2.4
TUBD1-207ENST00000587476 CUBNO60494 3623 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 LRP1BQ9NZR2 4599 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 UTP20O75691 2785 aaKnown RBP0.08□□□□□ -2.4
TUBD1-207ENST00000587476 GCN1Q92616 2671 aaKnown RBP0.08□□□□□ -2.4
TUBD1-207ENST00000587476 FASNP49327 2511 aaKnown RBP0.08□□□□□ -2.4
TUBD1-207ENST00000587476 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 SPRR2EP22531 72 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 RPL39LQ96EH5 51 aaKnown RBP0.08□□□□□ -2.4
TUBD1-207ENST00000587476 LYSTQ99698 3801 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 TOMM7Q9P0U1 55 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 CLTCL1P53675 1640 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 ACACAQ13085 2346 aa0.08□□□□□ -2.4
TUBD1-207ENST00000587476 EPG5Q9HCE0 2579 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 DNAH9Q9NYC9 4486 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 COL6A3P12111 3177 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 LEAP2Q969E1 77 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 SPRR2FQ96RM1 72 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 DCHS2Q6V1P9 2916 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 SETD2Q9BYW2 2564 aaPredicted RBP0.07□□□□□ -2.4
TUBD1-207ENST00000587476 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 SPG11Q96JI7 2443 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 LRP2P98164 4655 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 DMXL1Q9Y485 3027 aa0.07□□□□□ -2.4
TUBD1-207ENST00000587476 RIF1Q5UIP0 2472 aaKnown RBP0.07□□□□□ -2.4
TUBD1-207ENST00000587476 PKD1P98161 4303 aa0.06□□□□□ -2.4
TUBD1-207ENST00000587476 LRRK2Q5S007 2527 aa0.06□□□□□ -2.4
TUBD1-207ENST00000587476 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
TUBD1-207ENST00000587476 SRRM2Q9UQ35 2752 aaKnown RBP0.06□□□□□ -2.4
TUBD1-207ENST00000587476 PKHD1P08F94 4074 aa0.05□□□□□ -2.4
TUBD1-207ENST00000587476 KRTAP8-1Q8IUC2 63 aa0.05□□□□□ -2.4
TUBD1-207ENST00000587476 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
TUBD1-207ENST00000587476 ANK3Q12955 4377 aaKnown RBP0.05□□□□□ -2.4
TUBD1-207ENST00000587476 TEP1Q99973 2627 aaKnown RBP0.05□□□□□ -2.4
TUBD1-207ENST00000587476 VPS13BQ7Z7G8 4022 aa0.05□□□□□ -2.4
TUBD1-207ENST00000587476 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
TUBD1-207ENST00000587476 FAM186AA6NE01 2351 aa0.04□□□□□ -2.4
TUBD1-207ENST00000587476 ANKRD11Q6UB99 2663 aaPredicted RBP0.04□□□□□ -2.4
TUBD1-207ENST00000587476 APOBP04114 4563 aaKnown RBP0.04□□□□□ -2.4
TUBD1-207ENST00000587476 PDZD2O15018 2839 aa0.04□□□□□ -2.4
TUBD1-207ENST00000587476 SMR3BP02814 79 aaPredicted RBP0.04□□□□□ -2.4
TUBD1-207ENST00000587476 DNAH11Q96DT5 4516 aa0.04□□□□□ -2.4
TUBD1-207ENST00000587476 ACACBO00763 2458 aa0.04□□□□□ -2.4
TUBD1-207ENST00000587476 RANBP2P49792 3224 aaKnown RBP0.04□□□□□ -2.4
TUBD1-207ENST00000587476 MGAM2Q2M2H8 2515 aa0.04□□□□□ -2.4
TUBD1-207ENST00000587476 TACC2O95359 2948 aa0.03□□□□□ -2.4
TUBD1-207ENST00000587476 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.4
TUBD1-207ENST00000587476 ZZEF1O43149 2961 aa0.03□□□□□ -2.4
TUBD1-207ENST00000587476 DEFB1P60022 68 aa0.03□□□□□ -2.4
TUBD1-207ENST00000587476 KRTAP19-5Q3LI72 72 aa0.03□□□□□ -2.4
TUBD1-207ENST00000587476 MYO18BQ8IUG5 2567 aa0.03□□□□□ -2.4
TUBD1-207ENST00000587476 CCDC168Q8NDH2 2452 aa0.03□□□□□ -2.41
TUBD1-207ENST00000587476 MROH2BQ7Z745 1585 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 ZANQ9Y493 2812 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 FAT3Q8TDW7 4589 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms