RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 NDUFB1O75438 58 aa10.84□□□□□ -0.67
RETREG3-205ENST00000586870 KLKP1Q107X0 134 aa10.84□□□□□ -0.67
RETREG3-205ENST00000586870 PKHD1L1Q86WI1 4243 aa10.83□□□□□ -0.67
RETREG3-205ENST00000586870 TMEM258P61165 79 aa10.81□□□□□ -0.68
RETREG3-205ENST00000586870 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
RETREG3-205ENST00000586870 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
RETREG3-205ENST00000586870 CASC2Q6XLA1 102 aa10.79□□□□□ -0.68
RETREG3-205ENST00000586870 A0A087X002 238 aa10.77□□□□□ -0.68
RETREG3-205ENST00000586870 KRTAP13-2Q52LG2 175 aa10.77□□□□□ -0.68
RETREG3-205ENST00000586870 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
RETREG3-205ENST00000586870 SNURFQ9Y675 71 aa10.76□□□□□ -0.69
RETREG3-205ENST00000586870 LRP1Q07954 4544 aaKnown RBP10.76□□□□□ -0.69
RETREG3-205ENST00000586870 NDUFC1O43677 76 aa10.76□□□□□ -0.69
RETREG3-205ENST00000586870 MMP24-AS1A0A0U1RRL7 71 aa10.75□□□□□ -0.69
RETREG3-205ENST00000586870 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
RETREG3-205ENST00000586870 ASB16-AS1Q495Z4 193 aa10.75□□□□□ -0.69
RETREG3-205ENST00000586870 PRR26Q8N8Z3 221 aa10.75□□□□□ -0.69
RETREG3-205ENST00000586870 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
RETREG3-205ENST00000586870 C5orf47Q569G3 176 aa10.73□□□□□ -0.69
RETREG3-205ENST00000586870 FAT3Q8TDW7 4589 aa10.73□□□□□ -0.69
RETREG3-205ENST00000586870 H7BZZ5 65 aa10.73□□□□□ -0.69
RETREG3-205ENST00000586870 KRTAP10-8P60410 259 aa10.73□□□□□ -0.69
RETREG3-205ENST00000586870 A0A1B0GVX0 72 aa10.72□□□□□ -0.69
RETREG3-205ENST00000586870 C8orf17Q9NRJ1 99 aa10.7□□□□□ -0.7
RETREG3-205ENST00000586870 hDV103S1A0JD37 113 aa10.69□□□□□ -0.7
RETREG3-205ENST00000586870 Q5XG85 94 aa10.69□□□□□ -0.7
RETREG3-205ENST00000586870 IGHV6-1A0A0B4J1U7 121 aa10.66□□□□□ -0.7
RETREG3-205ENST00000586870 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
RETREG3-205ENST00000586870 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
RETREG3-205ENST00000586870 TYMSOSQ8TAI1 123 aa10.64□□□□□ -0.71
RETREG3-205ENST00000586870 MP68P56378 58 aa10.62□□□□□ -0.71
RETREG3-205ENST00000586870 ZCCHC13Q8WW36 166 aaKnown RBP10.62□□□□□ -0.71
RETREG3-205ENST00000586870 LIMD2Q9BT23 127 aa10.62□□□□□ -0.71
RETREG3-205ENST00000586870 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
RETREG3-205ENST00000586870 C4orf48Q5BLP8 95 aa10.61□□□□□ -0.71
RETREG3-205ENST00000586870 TP53AIP1Q9HCN2 124 aa10.6□□□□□ -0.71
RETREG3-205ENST00000586870 H3BPC8 53 aa10.59□□□□□ -0.71
RETREG3-205ENST00000586870 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
RETREG3-205ENST00000586870 ATP5EP56381 51 aaPredicted RBP10.58□□□□□ -0.72
RETREG3-205ENST00000586870 MRPL34Q9BQ48 92 aaKnown RBP10.58□□□□□ -0.72
RETREG3-205ENST00000586870 C1orf195Q5TG92 126 aa10.58□□□□□ -0.72
RETREG3-205ENST00000586870 H0Y9P7 68 aa10.57□□□□□ -0.72
RETREG3-205ENST00000586870 SPINK1P00995 79 aa10.57□□□□□ -0.72
RETREG3-205ENST00000586870 NOTCH2NLQ7Z3S9 236 aa10.55□□□□□ -0.72
RETREG3-205ENST00000586870 TNXBP22105 4242 aa10.55□□□□□ -0.72
RETREG3-205ENST00000586870 HMCN2Q8NDA2 5059 aa10.53□□□□□ -0.72
RETREG3-205ENST00000586870 LINC00208Q96KT6 92 aa10.53□□□□□ -0.72
RETREG3-205ENST00000586870 SPAG11AQ6PDA7 123 aa10.52□□□□□ -0.73
RETREG3-205ENST00000586870 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
RETREG3-205ENST00000586870 RPS29P62273 56 aaKnown RBP10.51□□□□□ -0.73
RETREG3-205ENST00000586870 NDUFS5O43920 106 aa10.5□□□□□ -0.73
RETREG3-205ENST00000586870 LINC00304Q8N9R0 145 aa10.5□□□□□ -0.73
RETREG3-205ENST00000586870 SERP1Q9Y6X1 66 aa10.48□□□□□ -0.73
RETREG3-205ENST00000586870 LINC00313P59037 77 aa10.47□□□□□ -0.73
RETREG3-205ENST00000586870 C1orf64Q8NEQ6 169 aa10.46□□□□□ -0.74
RETREG3-205ENST00000586870 Q8N9P0 234 aaPredicted RBP10.38□□□□□ -0.75
RETREG3-205ENST00000586870 PRR4Q16378 134 aa10.37□□□□□ -0.75
RETREG3-205ENST00000586870 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
RETREG3-205ENST00000586870 CYP4F30PQ9H0H9 118 aa10.36□□□□□ -0.75
RETREG3-205ENST00000586870 KRTAP16-1A8MUX0 517 aa10.35□□□□□ -0.75
RETREG3-205ENST00000586870 KRTAP13-3Q3SY46 172 aa10.33□□□□□ -0.76
RETREG3-205ENST00000586870 Q5W150 140 aa10.32□□□□□ -0.76
RETREG3-205ENST00000586870 LOC101927531A0A1B0GV80 90 aa10.31□□□□□ -0.76
RETREG3-205ENST00000586870 UBR4Q5T4S7 5183 aa10.31□□□□□ -0.76
RETREG3-205ENST00000586870 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
RETREG3-205ENST00000586870 SMIM26A0A096LP01 95 aa10.26□□□□□ -0.77
RETREG3-205ENST00000586870 IGLV7-46A0A075B6I9 117 aa10.25□□□□□ -0.77
RETREG3-205ENST00000586870 PCOTHQ58A44 107 aa10.25□□□□□ -0.77
RETREG3-205ENST00000586870 LRP2P98164 4655 aa10.18□□□□□ -0.78
RETREG3-205ENST00000586870 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
RETREG3-205ENST00000586870 IGKV2-30P06310 120 aa10.15□□□□□ -0.79
RETREG3-205ENST00000586870 SVIPQ8NHG7 77 aa10.09□□□□□ -0.79
RETREG3-205ENST00000586870 TPRXLQ17RH7 258 aa10.07□□□□□ -0.8
RETREG3-205ENST00000586870 C20orf166-AS1Q96NR2 134 aa10.07□□□□□ -0.8
RETREG3-205ENST00000586870 C9orf92A6NGG3 77 aa10.07□□□□□ -0.8
RETREG3-205ENST00000586870 A8MUU9 505 aa10.07□□□□□ -0.8
RETREG3-205ENST00000586870 HRES1P13985 223 aa10.04□□□□□ -0.8
RETREG3-205ENST00000586870 COA5Q86WW8 74 aa10.04□□□□□ -0.8
RETREG3-205ENST00000586870 C4orf26Q17RF5 130 aa10.04□□□□□ -0.8
RETREG3-205ENST00000586870 RNF213Q63HN8 5207 aa10.02□□□□□ -0.8
RETREG3-205ENST00000586870 LPAP08519 4548 aa10.02□□□□□ -0.81
RETREG3-205ENST00000586870 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
RETREG3-205ENST00000586870 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
RETREG3-205ENST00000586870 Q1T7F1 81 aa9.98□□□□□ -0.81
RETREG3-205ENST00000586870 C7orf65Q6ZTY9 151 aa9.96□□□□□ -0.81
RETREG3-205ENST00000586870 ACYP2P14621 99 aa9.96□□□□□ -0.82
RETREG3-205ENST00000586870 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
RETREG3-205ENST00000586870 Q75L30 129 aa9.94□□□□□ -0.82
RETREG3-205ENST00000586870 V9GYY9 64 aa9.94□□□□□ -0.82
RETREG3-205ENST00000586870 XP32Q5T750 250 aa9.84□□□□□ -0.83
RETREG3-205ENST00000586870 SEC61BP60468 96 aaKnown RBP9.82□□□□□ -0.84
RETREG3-205ENST00000586870 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
RETREG3-205ENST00000586870 A8MUN3 132 aa9.78□□□□□ -0.84
RETREG3-205ENST00000586870 SPINK7P58062 85 aa9.78□□□□□ -0.84
RETREG3-205ENST00000586870 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
RETREG3-205ENST00000586870 ATP11AUNQ6ZP68 121 aa9.78□□□□□ -0.84
RETREG3-205ENST00000586870 LINC01558Q9Y6Z2 57 aa9.76□□□□□ -0.85
RETREG3-205ENST00000586870 PSPHP1O15172 72 aa9.75□□□□□ -0.85
RETREG3-205ENST00000586870 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
RETREG3-205ENST00000586870 Q5VV11 94 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms