RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 PDE6GP18545 87 aa11.32□□□□□ -0.6
R3HDM4-202ENST00000586080 MTURNQ8N3F0 131 aa11.31□□□□□ -0.6
R3HDM4-202ENST00000586080 A0A1B0GVX0 72 aa11.3□□□□□ -0.6
R3HDM4-202ENST00000586080 KRTAP16-1A8MUX0 517 aa11.3□□□□□ -0.6
R3HDM4-202ENST00000586080 J3KT08 172 aa11.29□□□□□ -0.6
R3HDM4-202ENST00000586080 MT1HP80294 61 aa11.29□□□□□ -0.6
R3HDM4-202ENST00000586080 C8orf87E5RJ46 101 aa11.27□□□□□ -0.61
R3HDM4-202ENST00000586080 H3BT86 120 aa11.27□□□□□ -0.61
R3HDM4-202ENST00000586080 A0A1B0GW54 56 aa11.25□□□□□ -0.61
R3HDM4-202ENST00000586080 NDUFB1O75438 58 aa11.23□□□□□ -0.61
R3HDM4-202ENST00000586080 KRTAP9-2Q9BYQ4 174 aa11.23□□□□□ -0.61
R3HDM4-202ENST00000586080 SPCS1Q9Y6A9 102 aa11.23□□□□□ -0.61
R3HDM4-202ENST00000586080 COL5A1-AS1Q5SY13 56 aa11.19□□□□□ -0.62
R3HDM4-202ENST00000586080 M0R2T5 61 aa11.18□□□□□ -0.62
R3HDM4-202ENST00000586080 NREPQ16612 68 aa11.18□□□□□ -0.62
R3HDM4-202ENST00000586080 A8MWP4 228 aa11.16□□□□□ -0.62
R3HDM4-202ENST00000586080 IGKV3D-7A0A0C4DH55 119 aa11.13□□□□□ -0.63
R3HDM4-202ENST00000586080 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
R3HDM4-202ENST00000586080 FLGP20930 4061 aaPredicted RBP11.1□□□□□ -0.63
R3HDM4-202ENST00000586080 PCP4L1A6NKN8 68 aa11.07□□□□□ -0.64
R3HDM4-202ENST00000586080 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
R3HDM4-202ENST00000586080 PRR15Q8IV56 129 aa11.06□□□□□ -0.64
R3HDM4-202ENST00000586080 K7EP34 96 aa11.05□□□□□ -0.64
R3HDM4-202ENST00000586080 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
R3HDM4-202ENST00000586080 ZCCHC13Q8WW36 166 aaKnown RBP11.05□□□□□ -0.64
R3HDM4-202ENST00000586080 Q6ZVQ6 151 aa11.03□□□□□ -0.64
R3HDM4-202ENST00000586080 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
R3HDM4-202ENST00000586080 FAM236DA0A1B0GTK5 79 aa11.02□□□□□ -0.65
R3HDM4-202ENST00000586080 FAM236CP0DP71 79 aa11.02□□□□□ -0.65
R3HDM4-202ENST00000586080 LORP23490 312 aaPredicted RBP11.01□□□□□ -0.65
R3HDM4-202ENST00000586080 PRO0461Q9UI25 63 aa11□□□□□ -0.65
R3HDM4-202ENST00000586080 K7EQZ3 153 aa10.99□□□□□ -0.65
R3HDM4-202ENST00000586080 BPY2O14599 106 aa10.99□□□□□ -0.65
R3HDM4-202ENST00000586080 MMP24-AS1A0A0U1RRL7 71 aa10.98□□□□□ -0.65
R3HDM4-202ENST00000586080 HRES1P13985 223 aa10.98□□□□□ -0.65
R3HDM4-202ENST00000586080 RBM12B-AS1Q9P1G2 102 aa10.98□□□□□ -0.65
R3HDM4-202ENST00000586080 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
R3HDM4-202ENST00000586080 GTF2H5Q6ZYL4 71 aa10.94□□□□□ -0.66
R3HDM4-202ENST00000586080 TMEM254Q8TBM7 123 aa10.94□□□□□ -0.66
R3HDM4-202ENST00000586080 MRPL34Q9BQ48 92 aaKnown RBP10.94□□□□□ -0.66
R3HDM4-202ENST00000586080 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
R3HDM4-202ENST00000586080 SPINK7P58062 85 aa10.92□□□□□ -0.66
R3HDM4-202ENST00000586080 MPLKIPQ8TAP9 179 aa10.91□□□□□ -0.66
R3HDM4-202ENST00000586080 NDUFS5O43920 106 aa10.9□□□□□ -0.66
R3HDM4-202ENST00000586080 Q8N9L7 120 aa10.89□□□□□ -0.67
R3HDM4-202ENST00000586080 UBL5Q9BZL1 73 aa10.87□□□□□ -0.67
R3HDM4-202ENST00000586080 LINC00846Q9NV44 126 aa10.86□□□□□ -0.67
R3HDM4-202ENST00000586080 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
R3HDM4-202ENST00000586080 F8W1H4 67 aa10.82□□□□□ -0.68
R3HDM4-202ENST00000586080 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
R3HDM4-202ENST00000586080 CASC2Q6XLA1 102 aa10.8□□□□□ -0.68
R3HDM4-202ENST00000586080 ETDBQ3ZM63 59 aa10.78□□□□□ -0.68
R3HDM4-202ENST00000586080 HCG22E2RYF7 251 aa10.74□□□□□ -0.69
R3HDM4-202ENST00000586080 FSIP2Q5CZC0 6907 aa10.7□□□□□ -0.7
R3HDM4-202ENST00000586080 IGKV2D-30A0A075B6S6 120 aa10.7□□□□□ -0.7
R3HDM4-202ENST00000586080 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
R3HDM4-202ENST00000586080 Q5W150 140 aa10.68□□□□□ -0.7
R3HDM4-202ENST00000586080 KRTAP9-8Q9BYQ0 159 aa10.67□□□□□ -0.7
R3HDM4-202ENST00000586080 C7orf65Q6ZTY9 151 aa10.64□□□□□ -0.71
R3HDM4-202ENST00000586080 CRCT1Q9UGL9 99 aa10.64□□□□□ -0.71
R3HDM4-202ENST00000586080 CXCL6P80162 114 aa10.63□□□□□ -0.71
R3HDM4-202ENST00000586080 MT2AP02795 61 aa10.57□□□□□ -0.72
R3HDM4-202ENST00000586080 ACYP1P07311 99 aa10.51□□□□□ -0.73
R3HDM4-202ENST00000586080 H1FX-AS1Q4G0G2 97 aa10.51□□□□□ -0.73
R3HDM4-202ENST00000586080 MT1FP04733 61 aa10.5□□□□□ -0.73
R3HDM4-202ENST00000586080 KRTAP10-10P60014 251 aa10.49□□□□□ -0.73
R3HDM4-202ENST00000586080 FAM240AA0A1B0GVK7 77 aa10.46□□□□□ -0.73
R3HDM4-202ENST00000586080 C4orf26Q17RF5 130 aa10.46□□□□□ -0.73
R3HDM4-202ENST00000586080 TP53AIP1Q9HCN2 124 aa10.46□□□□□ -0.73
R3HDM4-202ENST00000586080 A0A1B0GV90 55 aa10.43□□□□□ -0.74
R3HDM4-202ENST00000586080 ATP5EP2Q5VTU8 51 aa10.41□□□□□ -0.74
R3HDM4-202ENST00000586080 HIST1H4AP62805 103 aaKnown RBP10.38□□□□□ -0.75
R3HDM4-202ENST00000586080 USH2AO75445 5202 aa10.37□□□□□ -0.75
R3HDM4-202ENST00000586080 KRTAP9-3Q9BYQ3 159 aa10.34□□□□□ -0.75
R3HDM4-202ENST00000586080 TRAV22A0A0B4J277 110 aa10.28□□□□□ -0.76
R3HDM4-202ENST00000586080 LINC00643Q86TS7 51 aa10.28□□□□□ -0.76
R3HDM4-202ENST00000586080 C1orf64Q8NEQ6 169 aa10.28□□□□□ -0.76
R3HDM4-202ENST00000586080 LCE2BO14633 110 aa10.26□□□□□ -0.77
R3HDM4-202ENST00000586080 KRTAP3-1Q9BYR8 98 aa10.25□□□□□ -0.77
R3HDM4-202ENST00000586080 A0A087WVE0 104 aa10.24□□□□□ -0.77
R3HDM4-202ENST00000586080 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
R3HDM4-202ENST00000586080 CYP4F30PQ9H0H9 118 aa10.22□□□□□ -0.77
R3HDM4-202ENST00000586080 S4R3F8 94 aa10.22□□□□□ -0.77
R3HDM4-202ENST00000586080 C5orf47Q569G3 176 aa10.21□□□□□ -0.77
R3HDM4-202ENST00000586080 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
R3HDM4-202ENST00000586080 UQCRQO14949 82 aa10.19□□□□□ -0.78
R3HDM4-202ENST00000586080 H0Y9P7 68 aa10.16□□□□□ -0.78
R3HDM4-202ENST00000586080 J3QR89 54 aa10.15□□□□□ -0.78
R3HDM4-202ENST00000586080 ATOX1O00244 68 aa10.13□□□□□ -0.79
R3HDM4-202ENST00000586080 LCA10Q71F78 164 aa10.12□□□□□ -0.79
R3HDM4-202ENST00000586080 CSAG1Q6PB30 78 aa10.09□□□□□ -0.79
R3HDM4-202ENST00000586080 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
R3HDM4-202ENST00000586080 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
R3HDM4-202ENST00000586080 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
R3HDM4-202ENST00000586080 LINC00208Q96KT6 92 aa10.01□□□□□ -0.81
R3HDM4-202ENST00000586080 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
R3HDM4-202ENST00000586080 MP68P56378 58 aa9.98□□□□□ -0.81
R3HDM4-202ENST00000586080 FCGBPQ9Y6R7 5405 aaPredicted RBP9.97□□□□□ -0.81
R3HDM4-202ENST00000586080 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
R3HDM4-202ENST00000586080 SCGB1A1P11684 91 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms