RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 A6NN06 94 aa4.29□□□□□ -1.72
CDH8-214ENST00000585315 M0QZ58 72 aa4.28□□□□□ -1.72
CDH8-214ENST00000585315 CFAP47Q6ZTR5 3102 aa4.28□□□□□ -1.72
CDH8-214ENST00000585315 DMXL1Q9Y485 3027 aa4.28□□□□□ -1.72
CDH8-214ENST00000585315 VCANP13611 3396 aa4.27□□□□□ -1.73
CDH8-214ENST00000585315 PDZD2O15018 2839 aa4.26□□□□□ -1.73
CDH8-214ENST00000585315 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
CDH8-214ENST00000585315 DNAH14Q0VDD8 3507 aa4.25□□□□□ -1.73
CDH8-214ENST00000585315 TNRC18O15417 2968 aaPredicted RBP4.25□□□□□ -1.73
CDH8-214ENST00000585315 COL6A3P12111 3177 aa4.24□□□□□ -1.73
CDH8-214ENST00000585315 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
CDH8-214ENST00000585315 KRTAP10-1P60331 282 aa4.23□□□□□ -1.73
CDH8-214ENST00000585315 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
CDH8-214ENST00000585315 CDH23Q9H251 3354 aa4.21□□□□□ -1.74
CDH8-214ENST00000585315 Q5VSD8 79 aa4.21□□□□□ -1.74
CDH8-214ENST00000585315 TGP01266 2768 aa4.2□□□□□ -1.74
CDH8-214ENST00000585315 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
CDH8-214ENST00000585315 FBN2P35556 2912 aa4.19□□□□□ -1.74
CDH8-214ENST00000585315 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
CDH8-214ENST00000585315 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
CDH8-214ENST00000585315 KRTAP13-1Q8IUC0 172 aa4.18□□□□□ -1.74
CDH8-214ENST00000585315 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
CDH8-214ENST00000585315 TENM2Q9NT68 2774 aa4.16□□□□□ -1.74
CDH8-214ENST00000585315 Q6ZRN7 208 aaPredicted RBP4.16□□□□□ -1.74
CDH8-214ENST00000585315 SRRM2Q9UQ35 2752 aaKnown RBP4.15□□□□□ -1.75
CDH8-214ENST00000585315 MXRA5Q9NR99 2828 aa4.15□□□□□ -1.75
CDH8-214ENST00000585315 A8MUU9 505 aa4.12□□□□□ -1.75
CDH8-214ENST00000585315 KRTAP7-1Q8IUC3 87 aa4.12□□□□□ -1.75
CDH8-214ENST00000585315 USP34Q70CQ2 3546 aa4.11□□□□□ -1.75
CDH8-214ENST00000585315 KRTAP11-1Q8IUC1 163 aa4.11□□□□□ -1.75
CDH8-214ENST00000585315 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CDH8-214ENST00000585315 VWFP04275 2813 aa4.09□□□□□ -1.75
CDH8-214ENST00000585315 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
CDH8-214ENST00000585315 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.76
CDH8-214ENST00000585315 A8MU10 97 aa4.08□□□□□ -1.76
CDH8-214ENST00000585315 EYSQ5T1H1 3165 aa4.08□□□□□ -1.76
CDH8-214ENST00000585315 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
CDH8-214ENST00000585315 CELSR1Q9NYQ6 3014 aa4.07□□□□□ -1.76
CDH8-214ENST00000585315 MYO15AQ9UKN7 3530 aa4.06□□□□□ -1.76
CDH8-214ENST00000585315 SPEGQ15772 3267 aa4.06□□□□□ -1.76
CDH8-214ENST00000585315 TNP1P09430 55 aa4.06□□□□□ -1.76
CDH8-214ENST00000585315 HRNRQ86YZ3 2850 aaPredicted RBP4.05□□□□□ -1.76
CDH8-214ENST00000585315 SZT2Q5T011 3432 aa4.01□□□□□ -1.77
CDH8-214ENST00000585315 LOC400499M0QZD8 3231 aa3.96□□□□□ -1.78
CDH8-214ENST00000585315 P0C880 135 aa3.94□□□□□ -1.78
CDH8-214ENST00000585315 KRTAP21-3Q3LHN1 58 aa3.93□□□□□ -1.78
CDH8-214ENST00000585315 WDFY3Q8IZQ1 3526 aa3.93□□□□□ -1.78
CDH8-214ENST00000585315 H0YAA0 97 aa3.92□□□□□ -1.78
CDH8-214ENST00000585315 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
CDH8-214ENST00000585315 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.78
CDH8-214ENST00000585315 FBN1P35555 2871 aaKnown RBP3.9□□□□□ -1.79
CDH8-214ENST00000585315 COL7A1Q02388 2944 aa3.89□□□□□ -1.79
CDH8-214ENST00000585315 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
CDH8-214ENST00000585315 XP32Q5T750 250 aa3.87□□□□□ -1.79
CDH8-214ENST00000585315 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
CDH8-214ENST00000585315 SPTBN5Q9NRC6 3674 aaKnown RBP3.83□□□□□ -1.8
CDH8-214ENST00000585315 DCHS1Q96JQ0 3298 aa3.83□□□□□ -1.8
CDH8-214ENST00000585315 FBN3Q75N90 2809 aa3.81□□□□□ -1.8
CDH8-214ENST00000585315 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
CDH8-214ENST00000585315 MEGF8Q7Z7M0 2845 aa3.8□□□□□ -1.8
CDH8-214ENST00000585315 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
CDH8-214ENST00000585315 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
CDH8-214ENST00000585315 RELNP78509 3460 aa3.76□□□□□ -1.81
CDH8-214ENST00000585315 LAMA5O15230 3695 aa3.73□□□□□ -1.81
CDH8-214ENST00000585315 ZFHX4Q86UP3 3567 aa3.72□□□□□ -1.81
CDH8-214ENST00000585315 CUBNO60494 3623 aa3.69□□□□□ -1.82
CDH8-214ENST00000585315 OTOGQ6ZRI0 2925 aa3.67□□□□□ -1.82
CDH8-214ENST00000585315 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
CDH8-214ENST00000585315 KRTAP13-4Q3LI77 160 aa3.66□□□□□ -1.82
CDH8-214ENST00000585315 KRTAP10-10P60014 251 aa3.66□□□□□ -1.82
CDH8-214ENST00000585315 SMG1Q96Q15 3661 aaKnown RBP3.65□□□□□ -1.82
CDH8-214ENST00000585315 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
CDH8-214ENST00000585315 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
CDH8-214ENST00000585315 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
CDH8-214ENST00000585315 NBPF19A0A087WUL8 3843 aa3.6□□□□□ -1.83
CDH8-214ENST00000585315 DMDP11532 3685 aa3.6□□□□□ -1.83
CDH8-214ENST00000585315 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
CDH8-214ENST00000585315 SPENQ96T58 3664 aaKnown RBP3.57□□□□□ -1.84
CDH8-214ENST00000585315 SVEP1Q4LDE5 3571 aa3.55□□□□□ -1.84
CDH8-214ENST00000585315 KRTAP3-1Q9BYR8 98 aa3.52□□□□□ -1.85
CDH8-214ENST00000585315 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
CDH8-214ENST00000585315 MUC3AQ02505 3323 aa3.5□□□□□ -1.85
CDH8-214ENST00000585315 INE1O15225 51 aa3.49□□□□□ -1.85
CDH8-214ENST00000585315 TRRAPQ9Y4A5 3859 aa3.46□□□□□ -1.86
CDH8-214ENST00000585315 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
CDH8-214ENST00000585315 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
CDH8-214ENST00000585315 VPS13CQ709C8 3753 aa3.37□□□□□ -1.87
CDH8-214ENST00000585315 KRTAP3-2Q9BYR7 98 aa3.35□□□□□ -1.87
CDH8-214ENST00000585315 CSMD2Q7Z408 3487 aa3.33□□□□□ -1.88
CDH8-214ENST00000585315 CSMD3Q7Z407 3707 aa3.31□□□□□ -1.88
CDH8-214ENST00000585315 KRTAP3-3Q9BYR6 98 aa3.31□□□□□ -1.88
CDH8-214ENST00000585315 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
CDH8-214ENST00000585315 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
CDH8-214ENST00000585315 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
CDH8-214ENST00000585315 AKAP9Q99996 3911 aa3.2□□□□□ -1.9
CDH8-214ENST00000585315 BSNQ9UPA5 3926 aa3.18□□□□□ -1.9
CDH8-214ENST00000585315 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
CDH8-214ENST00000585315 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
CDH8-214ENST00000585315 ZNF469Q96JG9 3925 aaPredicted RBP3.04□□□□□ -1.92
CDH8-214ENST00000585315 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms