RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 A0A1B0GVX0 72 aa12.32□□□□□ -0.44
NDEL1-219ENST00000585098 A0A1B0GW54 56 aa12.32□□□□□ -0.44
NDEL1-219ENST00000585098 J3KT08 172 aa12.32□□□□□ -0.44
NDEL1-219ENST00000585098 MT1HP80294 61 aa12.32□□□□□ -0.44
NDEL1-219ENST00000585098 COX6B2Q6YFQ2 88 aa12.31□□□□□ -0.44
NDEL1-219ENST00000585098 MTURNQ8N3F0 131 aa12.3□□□□□ -0.44
NDEL1-219ENST00000585098 H3BT86 120 aa12.29□□□□□ -0.44
NDEL1-219ENST00000585098 C8orf87E5RJ46 101 aa12.28□□□□□ -0.44
NDEL1-219ENST00000585098 KRTAP9-2Q9BYQ4 174 aa12.24□□□□□ -0.45
NDEL1-219ENST00000585098 SPCS1Q9Y6A9 102 aa12.23□□□□□ -0.45
NDEL1-219ENST00000585098 NDUFB1O75438 58 aa12.22□□□□□ -0.45
NDEL1-219ENST00000585098 COL5A1-AS1Q5SY13 56 aa12.2□□□□□ -0.46
NDEL1-219ENST00000585098 A8MWP4 228 aa12.18□□□□□ -0.46
NDEL1-219ENST00000585098 NREPQ16612 68 aa12.18□□□□□ -0.46
NDEL1-219ENST00000585098 M0R2T5 61 aa12.14□□□□□ -0.47
NDEL1-219ENST00000585098 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
NDEL1-219ENST00000585098 FLGP20930 4061 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-219ENST00000585098 C8orf17Q9NRJ1 99 aa12.12□□□□□ -0.47
NDEL1-219ENST00000585098 SMCPP49901 116 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-219ENST00000585098 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
NDEL1-219ENST00000585098 KRTAP10-6P60371 365 aaPredicted RBP12.06□□□□□ -0.48
NDEL1-219ENST00000585098 Q8N9P0 234 aaPredicted RBP12.06□□□□□ -0.48
NDEL1-219ENST00000585098 PCP4L1A6NKN8 68 aa12.05□□□□□ -0.48
NDEL1-219ENST00000585098 K7EP34 96 aa12.05□□□□□ -0.48
NDEL1-219ENST00000585098 ZCCHC13Q8WW36 166 aaKnown RBP12.05□□□□□ -0.48
NDEL1-219ENST00000585098 LORP23490 312 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-219ENST00000585098 PRO0461Q9UI25 63 aa12.02□□□□□ -0.49
NDEL1-219ENST00000585098 Q6ZVQ6 151 aa12.01□□□□□ -0.49
NDEL1-219ENST00000585098 K7EQZ3 153 aa11.98□□□□□ -0.49
NDEL1-219ENST00000585098 HRES1P13985 223 aa11.98□□□□□ -0.49
NDEL1-219ENST00000585098 LCE2DQ5TA82 110 aaPredicted RBP11.98□□□□□ -0.49
NDEL1-219ENST00000585098 MMP24-AS1A0A0U1RRL7 71 aa11.97□□□□□ -0.49
NDEL1-219ENST00000585098 BPY2O14599 106 aa11.97□□□□□ -0.49
NDEL1-219ENST00000585098 FAM236DA0A1B0GTK5 79 aa11.95□□□□□ -0.5
NDEL1-219ENST00000585098 FAM236CP0DP71 79 aa11.95□□□□□ -0.5
NDEL1-219ENST00000585098 MPLKIPQ8TAP9 179 aa11.94□□□□□ -0.5
NDEL1-219ENST00000585098 TMEM254Q8TBM7 123 aa11.94□□□□□ -0.5
NDEL1-219ENST00000585098 RBM12B-AS1Q9P1G2 102 aa11.94□□□□□ -0.5
NDEL1-219ENST00000585098 MRPL34Q9BQ48 92 aaKnown RBP11.93□□□□□ -0.5
NDEL1-219ENST00000585098 GTF2H5Q6ZYL4 71 aa11.92□□□□□ -0.5
NDEL1-219ENST00000585098 SPINK7P58062 85 aa11.91□□□□□ -0.5
NDEL1-219ENST00000585098 hDV103S1A0JD37 113 aa11.9□□□□□ -0.5
NDEL1-219ENST00000585098 LINC00846Q9NV44 126 aa11.86□□□□□ -0.51
NDEL1-219ENST00000585098 Q8N9L7 120 aa11.85□□□□□ -0.51
NDEL1-219ENST00000585098 NDUFS5O43920 106 aa11.83□□□□□ -0.52
NDEL1-219ENST00000585098 UBL5Q9BZL1 73 aa11.83□□□□□ -0.52
NDEL1-219ENST00000585098 F8W1H4 67 aa11.82□□□□□ -0.52
NDEL1-219ENST00000585098 WFDC13Q8IUB5 93 aa11.79□□□□□ -0.52
NDEL1-219ENST00000585098 KRTAP9-6A0A140TA67 174 aa11.76□□□□□ -0.53
NDEL1-219ENST00000585098 ETDBQ3ZM63 59 aa11.76□□□□□ -0.53
NDEL1-219ENST00000585098 CASC2Q6XLA1 102 aa11.76□□□□□ -0.53
NDEL1-219ENST00000585098 KRTAP9-8Q9BYQ0 159 aa11.69□□□□□ -0.54
NDEL1-219ENST00000585098 HCG22E2RYF7 251 aa11.68□□□□□ -0.54
NDEL1-219ENST00000585098 Q5W150 140 aa11.67□□□□□ -0.54
NDEL1-219ENST00000585098 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
NDEL1-219ENST00000585098 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
NDEL1-219ENST00000585098 FSIP2Q5CZC0 6907 aa11.61□□□□□ -0.55
NDEL1-219ENST00000585098 CRCT1Q9UGL9 99 aa11.6□□□□□ -0.55
NDEL1-219ENST00000585098 CXCL6P80162 114 aa11.59□□□□□ -0.55
NDEL1-219ENST00000585098 C7orf65Q6ZTY9 151 aa11.58□□□□□ -0.56
NDEL1-219ENST00000585098 MT2AP02795 61 aa11.54□□□□□ -0.56
NDEL1-219ENST00000585098 ACYP1P07311 99 aa11.48□□□□□ -0.57
NDEL1-219ENST00000585098 MT1FP04733 61 aa11.46□□□□□ -0.57
NDEL1-219ENST00000585098 H1FX-AS1Q4G0G2 97 aa11.46□□□□□ -0.57
NDEL1-219ENST00000585098 FAM240AA0A1B0GVK7 77 aa11.43□□□□□ -0.58
NDEL1-219ENST00000585098 KRTAP10-10P60014 251 aa11.42□□□□□ -0.58
NDEL1-219ENST00000585098 TP53AIP1Q9HCN2 124 aa11.42□□□□□ -0.58
NDEL1-219ENST00000585098 C4orf26Q17RF5 130 aa11.4□□□□□ -0.58
NDEL1-219ENST00000585098 A0A1B0GV90 55 aa11.38□□□□□ -0.59
NDEL1-219ENST00000585098 ATP5EP2Q5VTU8 51 aa11.34□□□□□ -0.59
NDEL1-219ENST00000585098 KRTAP9-3Q9BYQ3 159 aa11.31□□□□□ -0.6
NDEL1-219ENST00000585098 HIST1H4AP62805 103 aaKnown RBP11.28□□□□□ -0.6
NDEL1-219ENST00000585098 USH2AO75445 5202 aa11.24□□□□□ -0.61
NDEL1-219ENST00000585098 LCE2BO14633 110 aa11.22□□□□□ -0.61
NDEL1-219ENST00000585098 LINC00643Q86TS7 51 aa11.22□□□□□ -0.61
NDEL1-219ENST00000585098 KRTAP3-1Q9BYR8 98 aa11.22□□□□□ -0.61
NDEL1-219ENST00000585098 C1orf64Q8NEQ6 169 aa11.2□□□□□ -0.62
NDEL1-219ENST00000585098 TRAV22A0A0B4J277 110 aa11.19□□□□□ -0.62
NDEL1-219ENST00000585098 CYP4F30PQ9H0H9 118 aa11.17□□□□□ -0.62
NDEL1-219ENST00000585098 A0A087WVE0 104 aa11.15□□□□□ -0.62
NDEL1-219ENST00000585098 LOC101927531A0A1B0GV80 90 aa11.11□□□□□ -0.63
NDEL1-219ENST00000585098 UQCRQO14949 82 aa11.11□□□□□ -0.63
NDEL1-219ENST00000585098 S4R3F8 94 aa11.11□□□□□ -0.63
NDEL1-219ENST00000585098 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
NDEL1-219ENST00000585098 SSPOA2VEC9 5147 aa11.07□□□□□ -0.64
NDEL1-219ENST00000585098 H0Y9P7 68 aa11.06□□□□□ -0.64
NDEL1-219ENST00000585098 J3QR89 54 aa11.05□□□□□ -0.64
NDEL1-219ENST00000585098 LCA10Q71F78 164 aa11.04□□□□□ -0.64
NDEL1-219ENST00000585098 ATOX1O00244 68 aa11.03□□□□□ -0.64
NDEL1-219ENST00000585098 CSAG1Q6PB30 78 aa11□□□□□ -0.65
NDEL1-219ENST00000585098 KRTAP19-1Q8IUB9 90 aa10.97□□□□□ -0.65
NDEL1-219ENST00000585098 OCR1Q9BZK8 76 aa10.92□□□□□ -0.66
NDEL1-219ENST00000585098 FAM236AA0A1B0GUQ0 79 aa10.91□□□□□ -0.66
NDEL1-219ENST00000585098 FAM236BA0A1B0GV22 79 aa10.91□□□□□ -0.66
NDEL1-219ENST00000585098 LINC00208Q96KT6 92 aa10.9□□□□□ -0.66
NDEL1-219ENST00000585098 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
NDEL1-219ENST00000585098 MP68P56378 58 aa10.86□□□□□ -0.67
NDEL1-219ENST00000585098 FCGBPQ9Y6R7 5405 aaPredicted RBP10.83□□□□□ -0.68
NDEL1-219ENST00000585098 KLKP1Q107X0 134 aa10.82□□□□□ -0.68
NDEL1-219ENST00000585098 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms